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Volumn 8, Issue 3, 2012, Pages 804-817

A statistical framework for multiparameter analysis at the single-cell level

Author keywords

[No Author keywords available]

Indexed keywords

OXYGEN;

EID: 84863125256     PISSN: 1742206X     EISSN: 17422051     Source Type: Journal    
DOI: 10.1039/c2mb05429a     Document Type: Article
Times cited : (3)

References (55)
  • 2
    • 77953121190 scopus 로고    scopus 로고
    • Single cell analysis: The new frontier in 'omics'
    • D. J. Wang S. Bodovitz Single cell analysis: the new frontier in 'omics' Trends Biotechnol. 2010 28 6 281 290
    • (2010) Trends Biotechnol. , vol.28 , Issue.6 , pp. 281-290
    • Wang, D.J.1    Bodovitz, S.2
  • 3
    • 79953266898 scopus 로고    scopus 로고
    • Single-cell genomics
    • T. Kalisky S. R. Quake Single-cell genomics Nat. Methods 2011 8 4 311 314
    • (2011) Nat. Methods , vol.8 , Issue.4 , pp. 311-314
    • Kalisky, T.1    Quake, S.R.2
  • 7
    • 2042425041 scopus 로고    scopus 로고
    • Nonlinear noise reduction
    • DOI 10.1109/JPROC.2002.1015013, PII S0018921902052398
    • J. Brocker U. Parlitz M. Ogorzalek Nonlinear Noise Reduction Proc. IEEE 2002 90 5 898 918 (Pubitemid 43779278)
    • (2002) Proceedings of the IEEE , vol.90 , Issue.5 , pp. 898-918
    • Brocker, J.1    Parlitz, U.2    OgorzaLek, M.3
  • 8
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • M. Schena D. Shalon R. W. Davis P. O. Brown Quantitative monitoring of gene expression patterns with a complementary DNA microarray Science 1995 270 5235 467 470
    • (1995) Science , vol.270 , Issue.5235 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 11
    • 0035296987 scopus 로고    scopus 로고
    • Making chips to probe genes
    • DOI 10.1109/6.908856
    • S. K. Moore Making chips to probe genes IEEE Spectrum 2001 38 3 54 60 (Pubitemid 35385171)
    • (2001) IEEE Spectrum , vol.38 , Issue.3 , pp. 54-60
    • Moore, S.K.1
  • 12
    • 67650742246 scopus 로고    scopus 로고
    • Integrative analysis of transcriptomic, proteomic data of Desulfovibrio vulgaris: A nonlinear model to predict abundance of undetected proteins
    • W. Torres-Garcia W. W. Zhang R. Johnson G. Runger D. R. Meldrum Integrative analysis of transcriptomic, proteomic data of Desulfovibrio vulgaris: a nonlinear model to predict abundance of undetected proteins Bioinformatics 2009 25 1905 1914
    • (2009) Bioinformatics , vol.25 , pp. 1905-1914
    • Torres-Garcia, W.1    Zhang, W.W.2    Johnson, R.3    Runger, G.4    Meldrum, D.R.5
  • 13
    • 79952650377 scopus 로고    scopus 로고
    • Integrative analysis of transcriptomic and proteomic data of Shewanella oneidensis: Missing value imputation using temporal datasets
    • W. Torres-Garcia S. D. Brown R. H. Johnson W. W. Zhang G. Runger D. R. Meldrum Integrative analysis of transcriptomic and proteomic data of Shewanella oneidensis: missing value imputation using temporal datasets Mol. BioSyst. 2011 7 4 1093 1104
    • (2011) Mol. BioSyst. , vol.7 , Issue.4 , pp. 1093-1104
    • Torres-Garcia, W.1    Brown, S.D.2    Johnson, R.H.3    Zhang, W.W.4    Runger, G.5    Meldrum, D.R.6
  • 14
    • 0034730124 scopus 로고    scopus 로고
    • Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
    • M. L. T. Lee F. C. Kuo G. A. Whitmore J. Sklar Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations Proc. Natl. Acad. Sci. 2000 97 18 9834 9839
    • (2000) Proc. Natl. Acad. Sci. , vol.97 , Issue.18 , pp. 9834-9839
    • Lee, M.L.T.1    Kuo, F.C.2    Whitmore, G.A.3    Sklar, J.4
  • 16
    • 3543133355 scopus 로고    scopus 로고
    • Interactively optimizing signal-to-noise ratios in expression profiling: Project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays
    • DOI 10.1093/bioinformatics/bth280
    • J. Seo M. Bakay Y. W. Chen S. Hilmer B. Shneiderman E. P Hoffman Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays Bioinformatics 2004 20 16 2534 2544 (Pubitemid 39534325)
    • (2004) Bioinformatics , vol.20 , Issue.16 , pp. 2534-2544
    • Seo, J.1    Bakay, M.2    Chen, Y.-W.3    Hilmer, S.4    Shneiderman, B.5    Hoffman, E.P.6
  • 17
    • 77954721900 scopus 로고    scopus 로고
    • Noise Reduction of cDNA Microarray Images Using Complex Wavelets
    • T. Howlader Y. P. Chaubey Noise Reduction of cDNA Microarray Images Using Complex Wavelets IEEE Trans. Image Process. 2010 19 8 1953 1967
    • (2010) IEEE Trans. Image Process. , vol.19 , Issue.8 , pp. 1953-1967
    • Howlader, T.1    Chaubey, Y.P.2
  • 18
    • 35748932917 scopus 로고    scopus 로고
    • A review of feature selection techniques in bioinformatics
    • DOI 10.1093/bioinformatics/btm344
    • Y. Saeys I. Inza P. Larrañaga A review of feature selection techniques in bioinformatics Bioinformatics 2007 23 19 2507 2517 (Pubitemid 350048351)
    • (2007) Bioinformatics , vol.23 , Issue.19 , pp. 2507-2517
    • Saeys, Y.1    Inza, I.2    Larranaga, P.3
  • 24
    • 77954383219 scopus 로고    scopus 로고
    • Automated selection and placement of single cells using vision-based feedback control
    • Y. Anis M. Holl D. Meldrum Automated selection and placement of single cells using vision-based feedback control IEEE Trans. Autom. Sci. Eng. 2010 7 3 598 606
    • (2010) IEEE Trans. Autom. Sci. Eng. , vol.7 , Issue.3 , pp. 598-606
    • Anis, Y.1    Holl, M.2    Meldrum, D.3
  • 25
    • 70349970824 scopus 로고    scopus 로고
    • Characterization of deep wet etching of fused silica glass for single cell and optical sensor deposition
    • H. Zhu M. Holl T. Ray S. Bhushan D. R. Meldrum Characterization of deep wet etching of fused silica glass for single cell and optical sensor deposition J. Micromech. Microeng. 2009 19 6
    • (2009) J. Micromech. Microeng. , vol.19 , pp. 6
    • Zhu, H.1    Holl, M.2    Ray, T.3    Bhushan, S.4    Meldrum, D.R.5
  • 26
    • 77953135783 scopus 로고    scopus 로고
    • Dually fluorescent sensing of ph and dissolved oxygen using a membrane made from polymerizable sensing monomers
    • Y. Tian B. R. Shumway C. Youngbull Y. Li A. K. Y. Jen R. H. Johnson D. R. Meldrum Dually fluorescent sensing of ph and dissolved oxygen using a membrane made from polymerizable sensing monomers Sens. Actuators, B 2010 47 2 714 722
    • (2010) Sens. Actuators, B , vol.47 , Issue.2 , pp. 714-722
    • Tian, Y.1    Shumway, B.R.2    Youngbull, C.3    Li, Y.4    Jen, A.K.Y.5    Johnson, R.H.6    Meldrum, D.R.7
  • 31
    • 11944262819 scopus 로고
    • Multiple Hypothesis Testing
    • J. P. Shaffer Multiple Hypothesis Testing Annu. Rev. Psychol. 1995 46 561 584
    • (1995) Annu. Rev. Psychol. , vol.46 , pp. 561-584
    • Shaffer, J.P.1
  • 32
    • 0025509381 scopus 로고
    • A novel method of inducing and assuring total anoxia during in vitro studies of O2 deprivation injury
    • J. K. Joseph D. Bunnachak T. J. Burke R. W. Schrier A novel method of inducing and assuring total anoxia during in vitro studies of O2 deprivation injury J. Am. Soc. Nephrol. 1990 1 837 840
    • (1990) J. Am. Soc. Nephrol. , vol.1 , pp. 837-840
    • Joseph, J.K.1    Bunnachak, D.2    Burke, T.J.3    Schrier, R.W.4
  • 33
    • 33646408455 scopus 로고    scopus 로고
    • A simple method of producing low oxygen conditions with Oxyrase for cultured cells exposed to radiation and Tirapazamine
    • K. C. Ho J. K. Leach K. Eley R. B. Mikkelsen P. S. Lin A simple method of producing low oxygen conditions with Oxyrase for cultured cells exposed to radiation and Tirapazamine Am. J. Clin. Oncol. 2003 26 4 e86 e91
    • (2003) Am. J. Clin. Oncol. , vol.26 , Issue.4
    • Ho, K.C.1    Leach, J.K.2    Eley, K.3    Mikkelsen, R.B.4    Lin, P.S.5
  • 34
    • 0035478854 scopus 로고    scopus 로고
    • Random forests
    • DOI 10.1023/A:1010933404324
    • L. Breiman Random forests Mach. Learn. 2001 45 5 32 (Pubitemid 32933532)
    • (2001) Machine Learning , vol.45 , Issue.1 , pp. 5-32
    • Breiman, L.1
  • 38
    • 77952474987 scopus 로고    scopus 로고
    • Cellular Heterogeneity: Do Differences Make a Difference?
    • S. J. Altschuler L. F. Wu Cellular Heterogeneity: Do Differences Make a Difference? Cell 2010 141 4 559 563
    • (2010) Cell , vol.141 , Issue.4 , pp. 559-563
    • Altschuler, S.J.1    Wu, L.F.2
  • 39
    • 0042553279 scopus 로고
    • Smoothing and differentiation of data by simplified least squares procedures
    • A. Savitzky M. J. E. Golay Smoothing and differentiation of data by simplified least squares procedures Anal. Chem. 1964 36 8 1627 1639
    • (1964) Anal. Chem. , vol.36 , Issue.8 , pp. 1627-1639
    • Savitzky, A.1    Golay, M.J.E.2
  • 40
    • 0021531901 scopus 로고
    • Least-squares polynomial filters for initial point and slope estimation
    • R. A. Leach C. A. Carter J. M. Harrister Least-squares polynomial filters for initial point and slope estimation Anal. Chem. 1984 56 13 2304 2307 (Pubitemid 14669414)
    • (1984) Analytical Chemistry , vol.56 , Issue.13 , pp. 2304-2307
    • Leach, R.A.1    Carter, C.A.2    Harris, J.M.3
  • 43
    • 11944254534 scopus 로고
    • General least-squares smoothing and differentiation by the convolution (Savitzky-Golay) method
    • P. A. Gorry General least-squares smoothing and differentiation by the convolution (Savitzky-Golay) method Anal. Chem. 1990 62 6 570 573
    • (1990) Anal. Chem. , vol.62 , Issue.6 , pp. 570-573
    • Gorry, P.A.1
  • 45
    • 0000669122 scopus 로고    scopus 로고
    • The exponentially weighted moving average
    • J. Hunter The exponentially weighted moving average J. Qual. Technol. 1996 18 4 203 210
    • (1996) J. Qual. Technol. , vol.18 , Issue.4 , pp. 203-210
    • Hunter, J.1
  • 46
    • 0001332840 scopus 로고
    • Comparison of multivariate CUSUM charts
    • J. Pignatiello G. C. Runger Comparison of multivariate CUSUM charts J. Qual. Technol. 1990 22 173 186
    • (1990) J. Qual. Technol. , vol.22 , pp. 173-186
    • Pignatiello, J.1    Runger, G.C.2
  • 50
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Y. Benjamini Y. Hochberg Controlling the false discovery rate: a practical and powerful approach to multiple testing J. R. Stat. Soc. Ser. B 1995 57 289 300
    • (1995) J. R. Stat. Soc. Ser. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 51
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate in multiple testing under dependency
    • DOI 10.1214/aos/1013699998
    • Y. Benjamini D. Yekutieli The control of the false discovery rate in multiple testing under dependency Ann. Stat. 2001 29 1165 1188 (Pubitemid 33575263)
    • (2001) Annals of Statistics , vol.29 , Issue.4 , pp. 1165-1188
    • Benjamini, Y.1    Yekutieli, D.2
  • 52
    • 0001884644 scopus 로고
    • Individual comparisons by ranking methods
    • F. Wilcoxon Individual comparisons by ranking methods Biometrics Bull. 1945 6 80 83
    • (1945) Biometrics Bull. , vol.6 , pp. 80-83
    • Wilcoxon, F.1
  • 53
    • 0002322469 scopus 로고
    • On a Test of Whether one of Two Random Variables is Stochastically Larger than the Other
    • H. B. Mann D. R. Whitney On a Test of Whether one of Two Random Variables is Stochastically Larger than the Other Ann. Math. Stat. 1947 18 1 50 60
    • (1947) Ann. Math. Stat. , vol.18 , Issue.1 , pp. 50-60
    • Mann, H.B.1    Whitney, D.R.2
  • 54
    • 84943709252 scopus 로고
    • Use of ranks in one-criterion variance analysis
    • W. H. Kruskal W. A. Wallis Use of ranks in one-criterion variance analysis J. Am. Stat. Assoc. 1952 47 260 583 621
    • (1952) J. Am. Stat. Assoc. , vol.47 , Issue.260 , pp. 583-621
    • Kruskal, W.H.1    Wallis, W.A.2


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