Single-cell genomics

Nature Methods

Volumn 8, Issue 4, 2011, Pages 311-314

  Kalisky, Tomer ^a   Quake, Stephen R ^b,c  

^a Stanford University   (United States)

^b STANFORD UNIVERSITY   (United States)

^c HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM; FLOW CYTOMETRY; FLUORESCENCE ACTIVATED CELL SORTING; GENE EXPRESSION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENOMICS; HAPLOTYPE; HUMAN; MICROARRAY ANALYSIS; MICROFLUIDICS; NONHUMAN; PHENOTYPIC VARIATION; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVIEW;

ANIMALS; BACTERIA; GENE EXPRESSION REGULATION; GENOMICS; MICROFLUIDIC ANALYTICAL TECHNIQUES; NUCLEIC ACID AMPLIFICATION TECHNIQUES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SEQUENCE ANALYSIS, DNA;

EID: 79953266898     PISSN: 15487091     EISSN: 15491676     Source Type: Journal    
DOI: 10.1038/nmeth0411-311     Document Type: Review

References (35)

1. Raj, A., van den Bogaard, P., Rifkin, S.A., van Oudenaarden, A. & Tyagi, S. Nat. Methods 5, 877-879 (2008).
2. Taniguchi, Y. et al. Science 329, 533-538 (2010).
3. Tietjen, I. et al. Neuron 38, 161-175 (2003).
4. Eberwine, J. et al. Proc. Natl. Acad. Sci. USA 89, 3010-3014 (1992).
5. Shapiro, H.M. Practical flow cytometry 4th edn. (Wiley-Liss, New York, 2003).
6. Irish, J.M. et al. Cell 118, 217-228 (2004).
7. Bandura, D.R. et al. Anal. Chem. 81, 6813-6822 (2009).
8. Elowitz, M.B., Levine, A.J., Siggia, E.D. & Swain, P.S. Science 297, 1183-1186 (2002).
9. Tay, S. et al. Nature 466, 267-271 (2010).
10. Li, H.H. et al. Nature 335, 414-417 (1988).
11. Maryanski, J.L., Jongeneel, C.V., Bucher, P., Casanova, J.L. & Walker, P.R. Immunity 4, 47-55 (1996).
12. Lambolez, B., Audinat, E., Bochet, P., Crepel, F. & Rossier, J. Neuron 9, 247-258 (1992).
13. Bengtsson, M., Stahlberg, A., Rorsman, P. & Kubista, M. Genome Res. 15, 1388-1392 (2005).
14. Tang, F. et al. Nat. Protoc. 1, 1154-1159 (2006).
15. Liu, J., Hansen, C. & Quake, S.R. Anal. Chem. 75, 4718-4723 (2003).
16. Guo, G. et al. Dev. Cell 18, 675-685 (2010).
17. Diehn, M. et al. Nature 458, 780-783 (2009).
18. Sykes, P.J. et al. Biotechniques 13, 444-449 (1992).
19. Warren, L., Bryder, D., Weissman, I.L. & Quake, S.R. Proc. Natl. Acad. Sci. USA 103, 17807-17812 (2006).
20. Chiang, M.K. & Melton, D.A. Dev. Cell 4, 383-393 (2003).
21. Luo, L. et al. Nat. Med. 5, 117-122 (1999).
22. Tang, F. et al. Nat. Methods 6, 377-382 (2009).
23. Ottesen, E.A., Hong, J.W., Quake, S.R. & Leadbetter, J.R. Science 314, 1464-1467 (2006).
24. Tadmor, A.D., Ottesen, E.A., Leadbetter, J.R. & Phillips, R. Science (in the press).
25. Dean, F.B., Nelson, J.R., Giesler, T.L. & Lasken, R.S. Genome Res. 11, 1095-1099 (2001).
26. Zhang, K. et al. Nat. Biotechnol. 24, 680-686 (2006).
27. Blainey, P.C. & Quake, S.R. Nucleic Acids Res. 39, e19 (2011).
28. Marcy, Y. et al. Proc. Natl. Acad. Sci. USA 104, 11889-11894 (2007).
29. Woyke, T. et al. PLoS ONE 4, e5299 (2009).
30. Woyke, T. et al. PLoS ONE 5, e10314 (2010).
31. Blainey, P.C., Mosier, A.C., Potanina, A., Francis, C.A. & Quake, S.R. PLoS ONE 6, e16626 (2011).
32. Rodrigue, S. et al. PLoS ONE 4, e6864 (2009).
33. Frumkin, D. et al. Cancer Res. 68, 5924-5931 (2008).
34. Fan, H.C., Wang, J., Potanina, A. & Quake, S.R. Nat. Biotechnol. 29, 51-57 (2011).
35. Leslie, M. Science 331, 24-26 (2011).