Phylogeny of the genus Bryoria

Lichenologist

Volumn 43, Issue 6, 2011, Pages 617-638

  Myllys, Leena ^a   Velmala, Saara ^a   Holien, Håkon ^b   Halonen, Pekka ^c   Wang, Li Song ^d   Goward, Trevor ^e  

^a UNIVERSITY OF HELSINKI   (Finland)

^b NORD UNIVERSITY   (Norway)

^c UNIVERSITY OF OULU   (Finland)

^d KUNMING INSTITUTE OF BOTANY   (China)

^e UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Americanae; classification; Parmeliaceae; secondary chemistry; species delimitation

Indexed keywords

EID: 84863115673     PISSN: 00242829     EISSN: 10961135     Source Type: Journal    
DOI: 10.1017/S0024282911000132     Document Type: Article

References (45)

1. Awasthi, D. D. (1970) On Alectoria acanthodes Hue, Alectoria confusa sp. nov. and systematic position of the genus Alectoria. Proceedings of the Indian Academy of Sciences 72: 149-155.
2. Awasthi, G. & Awasthi, D. D. (1985) Lichen genera Alectoria, Bryoria and Sulcaria from India and Nepal. Candollea 40: 305-320.
3. Brodo, I. M. (1978) Changing concepts regarding chemical diversity in lichens. Lichenologist 10: 1-11.
4. Brodo, I. M. (1992) Bryoria trichodes, Ochrolechia oregonensis and Xylographa opegraphella new to Europe. Graphis Scripta 4: 61-65.
5. Brodo, I. M. & Hawksworth, D. L. (1977) Alectoria and allied genera in North America. Opera Botanica 42: 1-164.
6. Bystrek, J. (1969) Die Gattung Alectoria. Lichenes, Usneaceae (Flechten des Himalaya 5). Khumbu Himal 6: 17-24.
7. Common, R. S. & Brodo, I. M. (1995) Bryoria sect. Subdivergentes recognized as the new genus Nodobryoria (Lichenized Ascomycotina). Bryologist 98: 189-206.
8. Crespo, A., Lumbsch,H. T., Mattson, J. E., Blanco,O., Divakar, P. K., Articus, K.,Wiklund, E., Bawingan, P. A. & Wedin, M. (2007) Testing morphologybased hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene. Molecular Phylogenetics and Evolution 44: 812-824.
9. Culberson, C. F. (1972) Improved conditions and new data for the identification of lichen products by a standardized thin-layer chromatographic method. Journal of Chromatography 72: 113-125.
10. Edgar, R. C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797.
11. Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113-118.
12. Goloboff, P. A., Farris, J. S. & Nixon, K. C. (2008) TNT, a free program for phylogenetic analysis. Cladistics 24: 77-786.
13. Goward, T. (1999) The Lichens of British Columbia Illustrated Keys. Part 2, Fruticose species. Victoria: British Columbia Ministry of Forests, Research Program, Special Report Series no. 9.
14. Goward, T. (2009) Readings on the lichen thallus: VI. Reassembly. Evansia 26: 91-97.
15. Halonen, P., Myllys, L., Velmala, S. & Hyvärinen, H. (2009) Gowardia (Parmeliaceae) - a newalectorioid lichen genus with two species. Bryologist 112:138-146.
16. Harada, H. & Wang, L. S. (2006) Taxonomic study on Bryoria (lichenized Ascomycota, Parmeliaceae) of Japan (1). "Bryoria confusa" on Mt. Fuji. Lichenology 5: 175-177.
17. Hawksworth, D. L. (1971) Regional studies in Alectoria (Lichenes) I. The central and south African species. Botaniska Notiser 124: 122-128.
18. Hawksworth, D. L. (1972) Regional studies in Alectoria (Lichenes) II. The British species. Lichenologist 5: 181-261.
19. Högnabba, F. (2006) Molecular phylogeny of the genus Stereocaulon (Stereocaulaceae, lichenized ascomycetes). Mycological Research 110: 1080-1092.
20. Holien, H. (1989) The genus Bryoria sect. Implexae in Norway. Lichenologist 21: 243-258.
21. Holien, H. (1991) Bryoria subcana in Norway. Graphis Scripta 3: 94-96.
22. Holien,H. (1992) Bryoria glabra new to Europe. Graphis Scripta 3: 138-139.
23. Holien, H. (1994) Additions to the Norwegian flora of lichens and lichenicolous fungi. Graphis Scripta 6: 39-43.
24. Jørgensen, P.M. (1972) Further studies in Alectoria sect. Divaricatae DR. Svensk Botanisk Tidskrift 66: 191-201.
25. Jørgensen, P. M. (1975) Further notes on Asian Alectoria. Bryologist 78: 77-80.
26. Jørgensen, P. M. & Galloway, D. J. (1983) Bryoria (lichenised Ascomycotina) in New Zealand. New Zealand Journal of Botany 21: 335-340.
27. Jørgensen, P.M.&Ryvarden, L. (1970) Contribution to the lichen flora of Norway. Årbok for Universitetet I Bergen, Matematisk- Naturvidenskapelig Serie 1969 10: 1-24.
28. Krog, H. (1980) On Bryoria chalybeiformis and some related species. Lichenologist 12: 243-245.
29. Lohtander, K., Myllys, L., Sundin, R., Källersjö, M. & Tehler, A. (1998) The species pair concept in the lichen Dendrographa leucophaea (Arthoniales):analyses based on ITS sequences. Bryologist 101: 404-411.
30. Lohtander, K., Oksanen, I. & Rikkinen, J. (2002) A phylogenetic study of Nephroma (lichen-forming Ascomycota). Mycological Research 106: 777-787.
31. Mietzsch, E., Lumbsch, H. T. & Elix, J. A. (1994) Wintabolites (Mactabolites for Windows). Users Manual and Computer Program. Ed. 2. Essen: Universität Essen.
32. Motyka, J. (1964) The North American species of Alectoria. Bryologist 67: 1-44.
33. Myllys, L., Lohtander, K., Källersjö, M. & Tehler, A. (1999) Sequence insertions and ITS data provide congruent information on Roccella canariensis and R. tuberculata (Arthoniales, Euascomycetes) phylogeny. Molecular Phylogenetics and Evolution 12:295-309.
34. Myllys, L., Stenroos, S. & Thell, A. (2002) New genes for phylogenetic studies of lichenized fungi:glyceraldehyde-3-phosphate dehydrogenase and beta-tubulin genes. Lichenologist 34: 237-246.
35. Myllys, L., Halonen, P. & Velmala, S. (2006) Notes on some rare species of Bryoria from Finland. Graphis Scripta 18: 23-26.
36. Orange, A., James, P. W. & White, F. J. (2001) Microchemical Methods for the Identification of Lichens. London: British Lichen Society.
37. Poelt, J. (1970) Das Konzept der Artenpaare bei den Flechten. Vorträge aus dem Gesamtgebiet der Botanik hrsg. von der deutschen botanischen Gesellschaft, Berlin 4: 187-198.
38. Thell, A., Feuerer, T., Stenroos, S., Kärnefelt, I. & Myllys, L. (2004) Monophyletic groups within the Parmeliaceae identified by ITS rDNA, β-tubulin and GAPDH sequences. Mycological Progress 3:297-314.
39. Thell, A., Stenroos, S., Feuerer, T., Kärnefelt, I., Myllys, L. & Hyvönen, J. (2002) Phylogeny of cetrarioid lichens (Parmeliaceae) inferred from ITS and β-tubulin sequences, morphology, anatomy and secondary chemistry. Mycological Progress 1: 335-354.
40. Velmala, S., Myllys, L., Halonen, P., Goward, T. & Ahti, T. (2009) Molecular data show that Bryoria fremontii and B. tortuosa (Parmeliaceae) are conspecific. Lichenologist 41: 231-242.
41. Wang, L. S. & Harada, H. (2001) Taxonomic study of Bryoria asiatica-group (lichenized Ascomycota, Parmeliaceae) in Yunnan, Southern China. Natural History Research 6: 43-52.
42. Wang, L. S., Harada, H., Narui, T. & Culberson, C. F. (2003) Bryoria hengduanensis (Lichenized Ascomycota, Parmeliaceae), a new species from Southern China. Acta Phytotaxononomica et Geobotanica 54: 99-104.
43. Wang, L. S., Harada, H., Koh, Y. J. & Hur, J.-S. (2005) Two species of Bryoria (Lichenized Ascomycota, Parmeliaceae) from the Sino-Himalayas. Mycobiology 33: 173-177.
44. Wang, L. S., Harada, H., Koh, Y. J. & Hur, J.-S. (2006) Taxonomic study of Bryoria (lichenized Ascomycota, Parmeliaceae) from the Sino-Himalaya (2). Bryoria fastigiata sp. nov. Journal of the Hattori Botanical Laboratory 100: 865-869.
45. White, T. J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal DNA genes for phylogenetics. In PCR Protocols: a Guide to Methods and Applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White, eds): 315-322. San Diego: Academic Press.