The development of event-related fMRI designs

NeuroImage

Volumn 62, Issue 2, 2012, Pages 1157-1162

  Liu, Thomas T ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Efficiency; Event related; Experimental design; FMRI

Indexed keywords

BRAIN FUNCTION; CONCEPTUAL FRAMEWORK; EVENT RELATED POTENTIAL; FUNCTIONAL MAGNETIC RESONANCE IMAGING; GENETIC ALGORITHM; HEMODYNAMICS; MATHEMATICAL MODEL; MEDICAL RESEARCH; METHODOLOGY; NEUROIMAGING; NEUROLOGY; PERFORMANCE MEASUREMENT SYSTEM; PRIORITY JOURNAL; PROCESS DESIGN; PROCESS OPTIMIZATION; REVIEW;

BRAIN; BRAIN MAPPING; EVOKED POTENTIALS; HISTORY, 20TH CENTURY; HISTORY, 21ST CENTURY; HUMANS; MAGNETIC RESONANCE IMAGING; MODELS, NEUROLOGICAL;

EID: 84863000061     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2011.10.008     Document Type: Review

References (38)

1. Aguirre G.K., Zarahn E., D'Esposito M. The variability of human, BOLD hemodynamic responses. Neuroimage 1998, 8:360-369.
2. Aguirre G.K., Mattar M.G., Magis-Weinberg L. de Bruijn cycles for neural decoding. Neuroimage 2011, 56:1293-1300.
3. Behzadi Y., Liu T.T. Caffeine reduces the initial dip in the visual BOLD response at 3 Tesla. Neuroimage 2006, 32:9-15.
4. Birn R.M., Cox R.W., Bandettini P.A. Detection versus estimation in event-related fMRI: choosing the optimal stimulus timing. Neuroimage 2002, 15:252-264.
5. Blamire A.M., Ogawa S., Ugurbil K., Rothman D., McCarthy G., Ellermann J.M., Hyder F., Rattner Z., Shulman R.G. Dynamic mapping of the human visual cortex by high-speed magnetic resonance imaging. Proc. Natl. Acad. Sci. U.S.A. 1992, 89:11069-11073.
6. Boynton G.M., Engel S.A., Glover G.H., Heeger D.J. Linear systems analysis of functional magnetic resonance imaging in human V1. J. Neurosci. 1996, 16:4207-4221.
7. Buckner R.L., Goodman J., Burock M., Rotte M., Koutstaal W., Schacter D., Rosen B., Dale A.M. Functional-anatomic correlates of object priming in humans revealed by rapid presentation event-related fMRI. Neuron 1998, 20:285-296.
8. Buracas G.T., Boynton G.M. Efficient design of event-related fMRI experiments using m-sequences. Neuroimage 2002, 16:801-813.
9. Burock M.A., Buckner R.L., Woldorff M.G., Rosen B.R., Dale A.M. Randomized event-related experimental designs allow for extremely rapid presentation rates using functional MRI. Neuroreport 1998, 9:3735-3739.
10. Buxton R.B., Liu T.T., Martinez A., Frank L.R., Luh W.-M., Wong E.C. Sorting out event-related paradigms in fMRI: the distinction between detecting an activation and estimating the hemodynamic response. Neuroimage 2000, 11:S457.
11. Clark V.P., Maisog J.M., Haxby J.V. fMRI study of face perception and memory using random stimulus sequences. J. Neurophysiol. 1998, 79:3257-3265.
12. Cohen E.R., Ugurbil K., Kim S.G. Effect of basal conditions on the magnitude and dynamics of the blood oxygenation level-dependent fMRI response. J. Cereb. Blood Flow Metab. 2002, 22:1042-1053.
13. Dale A.M. Optimal experimental design for event-related fMRI. Hum. Brain Mapp. 1999, 8:109-114.
14. Dale A.M., Buckner R.L. Selective averaging of rapidly presented individual trials using fMRI. Hum. Brain Mapp. 1997, 5:329-340.
15. D'Esposito M., Deouell L.Y., Gazzaley A. Alterations in the BOLD fMRI signal with ageing and disease: a challenge for neuroimaging. Nat. Rev. Neurosci. 2003, 4:863-872.
16. Friston K.J., Jezzard P., Turner R. Analysis of functional MRI time-series. Hum. Brain Mapp. 1994, 1:153-171.
17. Friston K.J., Zarahn E., Josephs O., Henson R.N.A., Dale A.M. Stochastic designs in event-related fMRI. Neuroimage 1999, 10:607-619.
18. Friston K.J., Harrison L., Penny W. Dynamic causal modelling. Neuroimage 2003, 19:1273-1302.
19. Hagberg G.E., Zito G., Patria F., Sanes J.N. Improved detection of event-related functional MRI signals using probability functions. Neuroimage 2001, 14:1193-1205.
20. Haykin S. Adaptive Filter Theory 1996, Prentic Hall, Upper Saddle River, NJ.
21. Huettel S.A., Singerman J.D., McCarthy G. The effects of aging upon the hemodynamic response measured by functional MRI. Neuroimage 2001, 13:161-175.
22. Josephs O., Henson R.N.A. Event-related functional magnetic resonance imaging: modelling, inference and optimization. Philos. Trans. R. Soc. Lond. B 1999, 354:1215-1228.
23. Josephs O., Turner R., Friston K.J. Event-related fMRI. Hum. Brain Mapp. 1997, 5:243-248.
24. Kao, M., Mittelmann, H.D., submitted for publication. A fast algorithm for constructing efficient event-related fMRI designs. Comput. Stat. Data Anal.
25. Kao M.-H., Mandal A., Lazar N., Stufken J. Multi-objective optimal experimental designs for event-related fMRI studies. Neuroimage 2009, 44:849-856.
26. Liu T.T. Efficiency, power, and entropy in event-related fMRI with multiple trial types. Part II: design of experiments. Neuroimage 2004, 21:401-413.
27. Liu T.T., Frank L.R. Efficiency, power, and entropy in event-related FMRI with multiple trial types. Part I: theory. Neuroimage 2004, 21:387-400.
28. Liu T.T., Frank L.R., Wong E.C., Buxton R.B. Detection power, estimation efficiency, and predictability in event-related fMRI. Neuroimage 2001, 13:759-773.
29. Maus B., van Breukelen G.J.P., Goebel R., Berger M.P.F. Robustness of optimal design of fMRI experiments with application of a genetic algorithm. Neuroimage 2010, 49:2433-2443.
30. Maus B., van Breukelen G.J.P., Goebel R., Berger M.P.F. Optimal design for nonlinear estimation of the hemodynamic response function. Hum. Brain Mapp. 2011, doi:10.1002/hbm.21289.
31. McCarthy G., Luby M., Gore J., Goldman-Rakic P. Infrequent events transiently activate human prefrontal and parietal cortex as measured by functional MRI. J. Neurophysiol. 1997, 77:1630-1634.
32. Norman K.A., Polyn S.M., Detre G.J., Haxby J.V. Beyond mind-reading: multi-voxel pattern analysis of fMRI data. Trends Cogn. Sci. (Regul Ed) 2006, 10:424-430.
33. Scharf L.L., Friedlander B. Matched subspace detectors. IEEE Trans. Signal. Proc. 1994, 42:2146-2157.
34. Seber G.A.F. Linear Regression Analysis 1977, John Wiley & Sons, New York. 1st ed.
35. Strang G. Linear Algebra and Its Applications 1980, Harcourt Brace Jovanovich, San Diego. 2nd ed.
36. Trefethen L.N., Bau D. Numerical Linear Algebra 1997, SIAM, Philadelphia.
37. Wager T.D., Nichols T.E. Optimization of experimental design in fMRI: a general framework using a genetic algorithm. Neuroimage 2003, 18:293-309.
38. Woolrich M.W., Behrens T.E., Smith S.M. Constrained linear basis sets for HRF modelling using variational Bayes. Neuroimage 2004, 21:1748-1761.