메뉴 건너뛰기




Volumn 35, Issue SUPPL.1, 2012, Pages 272-282

Transcriptome analysis of resistant soybean roots infected by Meloidogyne Javanica

Author keywords

Gene expression; Root knot nematode; Transcriptome

Indexed keywords

AN1 TYPE PROTEIN; AUXIN REPRESSED PROTEIN; COMPLEMENTARY DNA; METALLOTHIONEIN; NUCLEAR TRANSPORT FACTOR 2 PROTEIN; RNA; SLAC1 HOMOLOGUE 1 PROTEIN; SLAC1 HOMOLOGUE 4 PROTEIN; THIOREDOXIN; TRANSCRIPTOME; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; ZINC FINGER PROTEIN; AUXIN; BASIC PROTEIN; CYSTATIN; ETHYLENE RESPONSIVE FAMILY PROTEIN; MADS DOMAIN PROTEIN; MESSENGER RNA; NUCLEAR TRANSPORT FACTOR 2; PROTEIN; PROTEIN MYB; PROTEIN SERINE THREONINE KINASE; PROTEINASE INHIBITOR; SLAH4 HOMOLOGUE 4 PROTEIN; SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1;

EID: 84862978196     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/S1415-47572012000200008     Document Type: Article
Times cited : (26)

References (52)
  • 2
    • 2542449472 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags from roots of resistant soybean infected by the soybean cyst nematode
    • Alkharouf N, Khan R and Matthews B (2004) Analysis of expressed sequence tags from roots of resistant soybean infected by the soybean cyst nematode. Genome 47:380-388.
    • (2004) Genome , vol.47 , pp. 380-388
    • Alkharouf, N.1    Khan, R.2    Matthews, B.3
  • 3
    • 33747857598 scopus 로고    scopus 로고
    • Time course microarray analyses reveal global changes in gene expression of susceptible Glycine max (soybean) roots during infection by Heterodera glycines (soybean cyst nematode)
    • Alkharouf NW, Klink VP, Chouikha IB, Beard HS, MacDonald MH, Meyer S, Knap HT, Khan R and Matthews BF (2005) Time course microarray analyses reveal global changes in gene expression of susceptible Glycine max (soybean) roots during infection by Heterodera glycines (soybean cyst nematode). Planta 224:838-852.
    • (2005) Planta , vol.224 , pp. 838-852
    • Alkharouf, N.W.1    Klink, V.P.2    Chouikha, I.B.3    Beard, H.S.4    Macdonald, M.H.5    Meyer, S.6    Knap, H.T.7    Khan, R.8    Matthews, B.F.9
  • 5
    • 0030681260 scopus 로고    scopus 로고
    • The significance of digital gene expression profiles
    • Audic S and Claverie JM (1997) The significance of digital gene expression profiles. Genome Res 7:986-995.
    • (1997) Genome Res , vol.7 , pp. 986-995
    • Audic, S.1    Claverie, J.M.2
  • 6
    • 0030861438 scopus 로고    scopus 로고
    • The SWISS-PROT protein sequence data bank and its supplement TREMBL
    • Bairoch A and Apweiler R (1997) The SWISS-PROT protein sequence data bank and its supplement TREMBL. Nucleic Acids Res 25:31-36.
    • (1997) Nucleic Acids Res , vol.25 , pp. 31-36
    • Bairoch, A.1    Apweiler, R.2
  • 7
    • 14644401184 scopus 로고    scopus 로고
    • A broad characterization of the transcriptional profile of the compatible tomato response to the plant parasitic root knot nematode Meloidogyne javanica
    • Bar-Or C, Kapulnik Y and Koltai H (2005) A broad characterization of the transcriptional profile of the compatible tomato response to the plant parasitic root knot nematode Meloidogyne javanica. Eur J Plant Pathol 111:181-192.
    • (2005) Eur J Plant Pathol , vol.111 , pp. 181-192
    • Bar-Or, C.1    Kapulnik, Y.2    Koltai, H.3
  • 8
    • 0000123497 scopus 로고
    • Breeding plants for resistance to nematodes
    • Boerma D and Hussey RS (1992) Breeding plants for resistance to nematodes. J Nematol 24:242-252.
    • (1992) J Nematol , vol.24 , pp. 242-252
    • Boerma, D.1    Hussey, R.S.2
  • 9
    • 0042222586 scopus 로고
    • Modificação do método de Hussey e Barker para extração de ovos de Meloidogyne exigua de cafeeiro
    • Boneti JIS and Ferraz S (1981) Modificação do método de Hussey e Barker para extração de ovos de Meloidogyne exigua de cafeeiro. Fitopatol Bras 6:553.
    • (1981) Fitopatol Bras , vol.6 , pp. 553
    • Boneti, J.I.S.1    Ferraz, S.2
  • 11
    • 26444507732 scopus 로고    scopus 로고
    • Isolation and characterization of genes encoding Myb transcription factor in wheat (Triticum aestivum L.)
    • Chen R, Ni Z, Nie X, Qin Y, Dong G and Sun Q (2005) Isolation and characterization of genes encoding Myb transcription factor in wheat (Triticum aestivum L.). Plant Sci 169:1146-1154.
    • (2005) Plant Sci , vol.169 , pp. 1146-1154
    • Chen, R.1    Ni, Z.2    Nie, X.3    Qin, Y.4    Dong, G.5    Sun, Q.6
  • 12
    • 33750865214 scopus 로고    scopus 로고
    • Genes associated with heavy metal tolerance and accumulation in Zn/Cd hyper-accumulator Arabdopsis halleri: A genomic survey with cDNA microarray
    • Chiang HC, Lo JC and Yeh KC (2006) Genes associated with heavy metal tolerance and accumulation in Zn/Cd hyper-accumulator Arabdopsis halleri: A genomic survey with cDNA microarray. Environ Sci Technol 40:6792-6798.
    • (2006) Environ Sci Technol , vol.40 , pp. 6792-6798
    • Chiang, H.C.1    Lo, J.C.2    Yeh, K.C.3
  • 14
    • 33750056360 scopus 로고    scopus 로고
    • Expression profiling of chickpea genes differentially regulated during a resistance response to Ascochytarabiei
    • Coram TE and Pang EC (2006) Expression profiling of chickpea genes differentially regulated during a resistance response to Ascochytarabiei. Plant BioJ 4:647-666.
    • (2006) Plant BioJ , vol.4 , pp. 647-666
    • Coram, T.E.1    Pang, E.C.2
  • 17
    • 77955681498 scopus 로고    scopus 로고
    • Transcriptional profiling of root-knot nematode induced feeding sites in cowpea (Vigna unguiculata L. Walp.) using a soybean genome array
    • Das S, Ehlers JD, Close TJ and Roberts PA (2010) Transcriptional profiling of root-knot nematode induced feeding sites in cowpea (Vigna unguiculata L. Walp.) using a soybean genome array. BMC Genomics 11:e480.
    • (2010) BMC Genomics , vol.11
    • Das, S.1    Ehlers, J.D.2    Close, T.J.3    Roberts, P.A.4
  • 18
    • 0039984224 scopus 로고    scopus 로고
    • Resistance to root-knot, reniform, and soybean cyst nematodes in selected soybean breeding lines
    • Davis EL, Meyers DM, Burton JW and Barker KR (1998) Resistance to root-knot, reniform, and soybean cyst nematodes in selected soybean breeding lines. J Nematol 30:530-541.
    • (1998) J Nematol , vol.30 , pp. 530-541
    • Davis, E.L.1    Meyers, D.M.2    Burton, J.W.3    Barker, K.R.4
  • 20
    • 0028829961 scopus 로고
    • Stress-induced phenylpropanoid metabolism
    • Dixon RA and Paiva NL (1995) Stress-induced phenylpropanoid metabolism. Plant Cell 7:1085-1097.
    • (1995) Plant Cell , vol.7 , pp. 1085-1097
    • Dixon, R.A.1    Paiva, N.L.2
  • 23
    • 32344446535 scopus 로고    scopus 로고
    • AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development
    • He X-J, Um RL, Cao W-H, Zhang Z-G, Zhang J-S and Chen S-Y (2005) AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. Plant J 44:903-916.
    • (2005) Plant J , vol.44 , pp. 903-916
    • He, X.-J.1    Um, R.L.2    Cao, W.-H.3    Zhang, Z.-G.4    Zhang, J.-S.5    Chen, S.-Y.6
  • 24
    • 33645031084 scopus 로고    scopus 로고
    • Expression profiles of hot pepper (Capsicum annuum) genes under cold stress conditions
    • Hwang EW, Kim KA, Park SC, Jeong MJ, Byun MO and Kwon HB (2005) Expression profiles of hot pepper (Capsicum annuum) genes under cold stress conditions. J Biosci 30:101-111.
    • (2005) J Biosci , vol.30 , pp. 101-111
    • Hwang, E.W.1    Kim, K.A.2    Park, S.C.3    Jeong, M.J.4    Byun, M.O.5    Kwon, H.B.6
  • 25
    • 79955733702 scopus 로고    scopus 로고
    • Analysis of gene expression in soybean (Glycine max) roots in response to the root-knot nematode Meloidogyne incognita using microarrays and KEGG pathways
    • Ibrahim HMM, Hosseini P, Alkharouf NW, Hussein EHA, El-Din AEKYG, Aly MAM and Matthews BF (2011) Analysis of gene expression in soybean (Glycine max) roots in response to the root-knot nematode Meloidogyne incognita using microarrays and KEGG pathways. BMC Genomics 12:e220.
    • (2011) BMC Genomics , vol.12
    • Ibrahim, H.M.M.1    Hosseini, P.2    Alkharouf, N.W.3    Hussein, E.H.A.4    El-Din, A.E.K.Y.G.5    Aly, M.A.M.6    Matthews, B.F.7
  • 28
    • 27244450357 scopus 로고    scopus 로고
    • Large-scale Identification of expressed sequence tags involved in rice and rice blast fungus interactions genome analysis
    • Jantasuriyarat C, Gowda M, Haller K, Hatfiel J, Lu G, Stahlberg E, Zhou B, Li H, Kim H, Yu Y, et al. (2005) Large-scale Identification of expressed sequence tags involved in rice and rice blast fungus interactions genome analysis. Plant Physiol 138:105-115.
    • (2005) Plant Physiol , vol.138 , pp. 105-115
    • Jantasuriyarat, C.1    Gowda, M.2    Haller, K.3    Hatfiel, J.4    Lu, G.5    Stahlberg, E.6    Zhou, B.7    Li, H.8    Kim, H.9    Yu, Y.10
  • 30
    • 33947410319 scopus 로고    scopus 로고
    • Expression of EuNOD-ARP1 encoding auxin-repressed protein homolog is upregulated by auxin and localized to the fixation zone in root nodules of Elaeagnus umbellate
    • Kim HB, Lee H, Oh CJ, Lee NH and An CS (2007) Expression of EuNOD-ARP1 encoding auxin-repressed protein homolog is upregulated by auxin and localized to the fixation zone in root nodules of Elaeagnus umbellate. Mol Cells 23:115-121.
    • (2007) Mol Cells , vol.23 , pp. 115-121
    • Kim, H.B.1    Lee, H.2    Oh, C.J.3    Lee, N.H.4    An, C.S.5
  • 31
    • 27944495693 scopus 로고    scopus 로고
    • Laser capture microdissection (LCM) and expression analyses of Glycine max (soybean) syncytium containing root regions formed by the plant pathogen Heterodera glycines (soybean cyst nematode)
    • Klink VP, Alkharouf N, Macdonald M and Mahews B (2005) Laser capture microdissection (LCM) and expression analyses of Glycine max (soybean) syncytium containing root regions formed by the plant pathogen Heterodera glycines (soybean cyst nematode). Plant Mol Biol 59:965-979.
    • (2005) Plant Mol Biol , vol.59 , pp. 965-979
    • Klink, V.P.1    Alkharouf, N.2    Macdonald, M.3    Mahews, B.4
  • 32
    • 0038325763 scopus 로고    scopus 로고
    • The poplar root transcriptome: Analysis of 7000 expressed sequence tags
    • Kohler A, Delaruelle C, Martin D, Encelot N and Martin F (2003) The poplar root transcriptome: Analysis of 7000 expressed sequence tags. FEBS Lett 542:37-41.
    • (2003) FEBS Lett , vol.542 , pp. 37-41
    • Kohler, A.1    Delaruelle, C.2    Martin, D.3    Encelot, N.4    Martin, F.5
  • 33
    • 0035253047 scopus 로고    scopus 로고
    • Zinc finger proteins: New insights into structural and functional diversity
    • Laity JH, Lee BM and Wright PE (2001) Zinc finger proteins: New insights into structural and functional diversity. Curr Opin Struct Biol 11:39-46.
    • (2001) Curr Opin Struct Biol , vol.11 , pp. 39-46
    • Laity, J.H.1    Lee, B.M.2    Wright, P.E.3
  • 34
    • 71049140821 scopus 로고    scopus 로고
    • Upgrading root physiology for stress tolerance by ectomycorrhizas: Insights from metabolite and transcriptional profiling into reprogramming for stress anticipation
    • Luo ZB, Janz D, Jiang X, Göbel C, Wildhagen H, Tan Y, Rennenberg H, Feussner I and Polle A (2009) Upgrading root physiology for stress tolerance by ectomycorrhizas: Insights from metabolite and transcriptional profiling into reprogramming for stress anticipation. Plant Physiol 151:1902-1917.
    • (2009) Plant Physiol , vol.151 , pp. 1902-1917
    • Luo, Z.B.1    Janz, D.2    Jiang, X.3    Göbel, C.4    Wildhagen, H.5    Tan, Y.6    Rennenberg, H.7    Feussner, I.8    Polle, A.9
  • 35
    • 80855123881 scopus 로고    scopus 로고
    • Gene expression profiling of resistant and susceptible soybean lines infected with soybean cyst nematode
    • Mazarei M, Liu W, Al-Ahmad H, Arelli PR, Pantalone VR and Stewart Jr CN (2011) Gene expression profiling of resistant and susceptible soybean lines infected with soybean cyst nematode. Theor Appl Genet 123:1193-1206.
    • (2011) Theor Appl Genet , vol.123 , pp. 1193-1206
    • Mazarei, M.1    Liu, W.2    Al-Ahmad, H.3    Arelli, P.R.4    Pantalone, V.R.5    Stewart, C.N.6
  • 37
    • 58449089105 scopus 로고    scopus 로고
    • Acceleration of vacuolar regeneration and cell growth by over expression of an aquaporin NtTIP1; in tocabacco BY-2 cells
    • Okubo-Kurihara E, Sano T, Higati T, Kutsuna N and Hasezawa S (2009) Acceleration of vacuolar regeneration and cell growth by over expression of an aquaporin NtTIP1; in tocabacco BY-2 cells. Plant Cell Physiol 50:151-160.
    • (2009) Plant Cell Physiol , vol.50 , pp. 151-160
    • Okubo-Kurihara, E.1    Sano, T.2    Higati, T.3    Kutsuna, N.4    Hasezawa, S.5
  • 38
    • 13744249762 scopus 로고    scopus 로고
    • Transcriptional networks in plants NAC transcription factors: Structurally distinct, functionally diverse
    • Olsen AN, Ernst HA, Leggio LL and Skriver K. (2005) Transcriptional networks in plants NAC transcription factors: Structurally distinct, functionally diverse. Trends Plant Sci 10:79-87.
    • (2005) Trends Plant Sci , vol.10 , pp. 79-87
    • Olsen, A.N.1    Ernst, H.A.2    Leggio, L.L.3    Skriver, K.4
  • 40
    • 0025382824 scopus 로고
    • Molecular cloning and sequencing of a cDNA for an auxin-repressed mRNA: Correlation between fruit growth and repression of the auxin regulated gene
    • Reddy ASN and Poovaiah BW (1990) Molecular cloning and sequencing of a cDNA for an auxin-repressed mRNA: Correlation between fruit growth and repression of the auxin regulated gene. Plant Mol Biol 14:127-136.
    • (1990) Plant Mol Biol , vol.14 , pp. 127-136
    • Reddy, A.S.N.1    Poovaiah, B.W.2
  • 41
    • 2942535848 scopus 로고    scopus 로고
    • CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence
    • Rivas S, Rougon-Cardoso A, Smoker M, Schauser L, Yoshioka H and Jones JDG (2004) CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence. EMBO J 23:2156-2165.
    • (2004) EMBO J , vol.23 , pp. 2156-2165
    • Rivas, S.1    Rougon-Cardoso, A.2    Smoker, M.3    Schauser, L.4    Yoshioka, H.5    Jones, J.D.G.6
  • 42
    • 33751002651 scopus 로고    scopus 로고
    • Differential accumulation of the mRNA of the auxin-repressed gene CsGRP1 and the auxin induced peg formation during gravimorpho-genesis of cumcuber seedlings
    • Shimizu M, Suzuki K and Miyazawa Y (2006) Differential accumulation of the mRNA of the auxin-repressed gene CsGRP1 and the auxin induced peg formation during gravimorpho-genesis of cumcuber seedlings. Planta 225:13-22.
    • (2006) Planta , vol.225 , pp. 13-22
    • Shimizu, M.1    Suzuki, K.2    Miyazawa, Y.3
  • 44
    • 48649092632 scopus 로고    scopus 로고
    • Differential transcript accumulation in Cicerarietinum L. in response to a chewing insect Helicoverpa armigera and defence regulators correlate with reduced insect performance
    • Singh A, Singh IK and Verma PK (2008) Differential transcript accumulation in Cicerarietinum L. in response to a chewing insect Helicoverpa armigera and defence regulators correlate with reduced insect performance. J Exp Bot 59:2379-2392.
    • (2008) J Exp Bot , vol.59 , pp. 2379-2392
    • Singh, A.1    Singh, I.K.2    Verma, P.K.3
  • 45
    • 0037467682 scopus 로고    scopus 로고
    • Two novel genes are differentially expressed during early germination of the male gametophyte of Nicotiana tabacum
    • Steiner C, Bauer J, Amrhein N and Bucher M (2003) Two novel genes are differentially expressed during early germination of the male gametophyte of Nicotiana tabacum. Biochim Biophys Acta 1625:123-133.
    • (2003) Biochim Biophys Acta , vol.1625 , pp. 123-133
    • Steiner, C.1    Bauer, J.2    Amrhein, N.3    Bucher, M.4
  • 46
    • 0034518635 scopus 로고    scopus 로고
    • The comparison of gene expression from multiple cDNA libraries
    • Stekel DJ, Git Y and Falciani F (2000) The comparison of gene expression from multiple cDNA libraries. Genome Res 10:2055-2061.
    • (2000) Genome Res , vol.10 , pp. 2055-2061
    • Stekel, D.J.1    Git, Y.2    Falciani, F.3
  • 48
    • 3543023348 scopus 로고    scopus 로고
    • Down-regulation of metallothionein, a reactive oxygen scavenger, by the small GTPase OsRac1 in rice
    • Wong HL, Sakamoto T, Kawasaki T, Umemura K and Shimamoto, K (2004) Down-regulation of metallothionein, a reactive oxygen scavenger, by the small GTPase OsRac1 in rice. Plant Physiol 135:1447-1456.
    • (2004) Plant Physiol , vol.135 , pp. 1447-1456
    • Wong, H.L.1    Sakamoto, T.2    Kawasaki, T.3    Umemura, K.4    Shimamoto, K.5
  • 51
    • 33646946231 scopus 로고    scopus 로고
    • Identificaton and characterization of the Arabidopsis orthologs of Nuclear Transport Factor 2, the nuclear import factor of Ran1
    • Zhao Q, Leung S, Corbett A and Meier I (2006) Identificaton and characterization of the Arabidopsis orthologs of Nuclear Transport Factor 2, the nuclear import factor of Ran1. Plant Physiol 140:869-878.
    • (2006) Plant Physiol , vol.140 , pp. 869-878
    • Zhao, Q.1    Leung, S.2    Corbett, A.3    Meier, I.4
  • 52
    • 33845736876 scopus 로고    scopus 로고
    • SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis
    • Zhong R, Demura T and Ye ZH (2006) SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis. Plant Cell 18:3158-3170.
    • (2006) Plant Cell , vol.18 , pp. 3158-3170
    • Zhong, R.1    Demura, T.2    Ye, Z.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.