SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis

Plant Cell

Volumn 18, Issue 11, 2006, Pages 3158-3170

  Zhong, Ruiqin ^a   Demura, Taku ^b   Ye, Zhehg Hua ^a  

^a UNIVERSITY OF GEORGIA   (United States)

^b RIKEN   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMASS; GENES; GENETIC ENGINEERING;

ARABIDOPSIS; BIOSYNTHETIC GENES; TRANSCRIPTION FACTORS;

PLANT CELL CULTURE;

BIOMASS; GENES; GENETIC ENGINEERING; PLANTS;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 33845736876     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.106.047399     Document Type: Article

References (40)

1. Aspeborg, H., et al. (2005). Carbohydrate-active enzymes involved in the secondary cell wall biogenesis in hybrid aspen. Plant Physiol. 137, 983-997.
2. Baima, S., Possenti, M., Matteucci, A., Wisman, E., Altamura, M.M., Ruberti, I., and Morelli, G. (2001). The Arabidopsis ATHB-8 HD-zip protein acts as a differentiation-promoting transcription factor of the vascular meristems. Plant Physiol. 126, 643-655.
3. Baskin, T.I. (2001). On the alignment of cellulose microfibrils by cortical microtubules: A review and a model. Protoplasma 215, 150-171.
4. Bechtold, N., and Bouchez, D. (1994). In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. In Gene Transfer to Plants, I. Potrykus and G. Spangenberg, eds (Berlin: Springer-Verlag), pp. 19-23.
5. Boerjan, W., Ralph, J., and Baucher, M. (2003). Lignin biosynthesis. Annu. Rev. Plant Biol. 54, 519-546.
6. Brown, D.M., Zeef, L.A.H., Ellis, J., Goodacreb, R., and Turner, S.R. (2005). Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics. Plant Cell 17, 2281-2295.
7. Demura, T., et al. (2002). Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells. Proc. Natl. Acad. Sci. USA 99, 15794-15799.
8. Dhugga, K.S., Barreiro, R., Whitten, B., Stecca, K., Hazebroek, J., Randhawa, G.S., Dolan, M., Kinney, A.J., Tomes, D., Nichols, S., and Anderson, P. (2004). Guar seed β-mannan synthase is a member of the cellulose synthase super gene family. Science 303, 363-366.
9. Ehlting, J., et al. (2005). Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation. Plant J. 42, 618-640.
10. Fujita, M., Fujita, Y., Maruyama, K., Seki, M., Hiratsu, K., Ohme-Takagi, M., Tran, L.-S.P., Yamaguchi-Shinozaki, K., and Shinozaki, K. (2004). A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway. Plant J. 39, 863-876.
11. Funk, V., Kositsup, B., Zhao, C., and Beers, E.P. (2002). The Arabidopsis xylem peptidase XCP1 is a tracheary element vacuolar protein that may be a papain ortholog. Plant Physiol. 128, 84-94.
12. Goicoechea, M., Lacombe, E., Legay, S., Mihaljevic, S., Rech, P., Jauneau, A., Lapierre, C., Pollet, B., Verhaegen, D., Chaubet-Gigot, N., and Grima-Pettenati, J. (2005). EgMYB2, a new transcriptional activator from Eucalyptus xylem, regulates secondary cell wall formation and lignin biosynthesis. Plant J. 43, 553-567.
13. Hiratsu, K., Matsui, K., Koyama, T., and Ohme-Takagi, M. (2003). Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J. 34, 733-739.
14. Hiratsu, K., Mitsuda, N., Matsui, K., and Ohme-Takagi, M. (2004). Identification of the minimal repression domain of SUPERMAN shows that the DLELRL hexapeptide is both necessary and sufficient for repression of transcription in Arabidopsis. Biochem. Biophys. Res. Commun. 321, 172-178.
15. Hughes, J., and McCully, M.E. (1975). The use of an optical brightener in the study of plant structure. Stain Technol. 50, 319-329.
16. Ito, J., and Fukuda, H. (2002). ZEN1 is a key enzyme in the degradation of nuclear DNA during programmed cell death of tracheary elements. Plant Cell 14, 3201-3211.
17. Kubo, M., Udagawa, M., Nishikubo, N., Horiguchi, G., Yamaguchi, M., Ito, J., Mimura, T., Fukuda, H., and Demura, T. (2005). Transcription switches for protoxylem and metaxylem vessel formation. Genes Dev. 19, 1855-1860.
18. Liepman, A.H., Wilkerson, C.G., and Keegstra, K. (2005). Expression of cellulose synthase-like (CsI) genes in insect cells reveals that CsIA family members encode mannan synthases. Proc. Natl. Acad. Sci. USA 102, 2221-2226.
19. Liu, Z.B., Ulmasov, T., Shi, X., Hagen, G., and Guilfoyle, T.J. (1994). Soybean GH3 promoter contains multiple auxin-inducible elements. Plant Cell 6, 645-657.
20. McCartney, L., Marcus, S.E., and Knox, J.P. (2005). Monoclonal antibodies to plant cell wall xylans and arabinoxylans. J. Histochem. Cytochem. 53, 543-546.
21. Mitsuda, N., Seki, M., Shinozaki, K., and Ohme-Takagi, M. (2005). The NAC transcription factors NST1 and NST2 of Arabidopsis regulate secondary wall thickening and are required for anther dehiscence. Plant Cell 17, 2993-3006.
22. Nakazono, M., Qiu, F., Borsuk, L.A., and Schnable, P.S. (2003). Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: Identification of genes expressed differentially in epidermal cells or vascular tissues of maize. Plant Cell 15, 583-596.
23. Oh, S., Park, S., and Han, K.-H. (2003). Transcriptional regulation of secondary growth in Arabidopsis thaliana. J. Exp. Bot. 54, 2709-2722.
24. Olson, A.N., Ernst, H.A., Leggio, L.L., and Skriver, K. (2005). NAC transcription factors: Structurally distinct, functionally diverse. Trends Plant Sci. 10, 79-87.
25. Ooka, H., et al. (2003). Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res. 10, 239-247.
26. Page, R.D.M. (1996). TREEVIEW: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12, 357-358.
27. Patzlaff, A., McInnis, S., Courtenay, A., Surman, C., Newman, L.J., Smith, C., Bevan, M.W., Mansfield, S., Whetten, R.W., Sederoff, R.R., and Campbell, M.M. (2003). Characterization of a pine MYB that regulates lignification. Plant J. 35, 743-754.
28. Persson, S., Wei, H., Miline, J., Page, G.P., and Somerville, C.R. (2005). Identification of genes required for cellulose synthesis by repression analysis of public microarray data sets. Proc. Natl. Acad. Sci. USA 102, 8633-8638.
29. Sablowski, R.W.M., and Meyerowitz, E.M. (1998). A homolog of NO APICAL MERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA. Cell 92, 93-103.
30. Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M., Scholkopf, B., Weigel, D., and Lohmann, J.U. (2005). A gene expression map of Arabidopsis thaliana development. Nat. Genet. 37, 501-506.
31. Schrader, J., Nilsson, J., Mellerowicz, E., Berglund, A., Nilsson, P., Hertzberg, M., and Sandberg, G. (2004). A high-resolution transcript profile across the wood-forming meristem of poplar identifies potential regulators of cambial stem cell identity. Plant Cell 16, 2278-2292.
32. Tamagnone, L., Merida, A., Parr, A., Mackay, S., Culianez-Macia, F.A., Roberts, K., and Martin, C. (1998). The AmMYB308 and AmMYB330 transcription factors from Antirrhinum regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco. Plant Cell 10, 135-154.
33. Tanaka, K., Murata, K., Yamazaki, M., Onosato, K., Miyao, A., and Hirochika, H. (2003). Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall. Plant Physiol. 133, 73-83.
34. Taylor, J., and Mims, C.W. (1991). Fungal development and host cell responses to the rust fungus Puccinia substriata var. indica in seedlings and mature leaves of susceptible and resistant pearl millet. Can. J. Bot. 59, 1207-1219.
35. Taylor, N.G., Gardiner, J.C., Whiteman, R., and Turner, S.R. (2004). Cellulose synthesis in the Arabidopsis secondary cell wall. Cellulose 11, 329-338.
36. Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
37. Ye, Z.-H., Freshour, G., Hahn, M.G., Burk, D.H., and Zhong, R. (2002). Vascular development in Arabidopsis. Int. Rev. Cytol. 220, 225-256.
38. Zhao, C., Craig, J.C., Petzold, H.E., Dickerman, A.W., and Beers, E.P. (2005). The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. Plant Physiol. 138, 803-818.
39. Zhong, R., Pena, M.J., Zhou, G.K., Nairn, C.J., Wood-Jones, A., Richardson, E.A., Morrison, W.H., III, Darvill, A.G., York, W.S., and Ye, Z.-H. (2005). Arabidopsis fragile fibers, which encodes a putative glucuronyltransferase, is essential for normal secondary wall synthesis. Plant Cell 17, 3390-3408.
40. Zhong, R., and Ye, Z.-H. (1999). IFL1, a gene regulating interfascicular fiber differentiation in Arabidopsis, encodes a homeodomain-leucine zipper protein. Plant Cell 11, 2139-2152.