Metabolic engineering of thermophilic Bacillus licheniformis for chiral pure D-2,3-butanediol production

Biotechnology and Bioengineering

Volumn 109, Issue 7, 2012, Pages 1610-1621

  Wang, Qingzhao ^a,b   Chen, Tao ^a   Zhao, Xueming ^a   Chamu, Jauhleene ^b  

^a TIANJIN UNIVERSITY   (China)

^b UNIVERSITY OF FLORIDA   (United States)

Author keywords

2,3 butanediol; Bacillus licheniformis; Metabolic engineering

Indexed keywords

2 ,3-BUTANEDIOL; AERATION CONTROL; BACILLUS LICHENIFORMIS; BUTANEDIOL; GENE DELETION; HIGH TEMPERATURE; KLEBSIELLA PNEUMONIA; KNOCK OUTS; LIGNOCELLULOSIC BIOMASS; LOW COSTS; OPTICAL PURITY; SIMULTANEOUS SACCHARIFICATION AND FERMENTATION; THERMOPHILIC BACILLI; TRANSFORMATION METHODS; TRANSFORMATION SYSTEMS;

GENES; GLUCOSE; METABOLIC ENGINEERING; STEREOCHEMISTRY;

BACTERIOLOGY;

2,3 BUTANEDIOL; BACTERIAL DNA; GENOMIC DNA; GLUCOSE; LACTIC ACID; LIGNOCELLULOSE; OLIGONUCLEOTIDE; XYLOSE;

ANAEROBIC FERMENTATION; ARTICLE; BACILLUS LICHENIFORMIS; BACILLUS SUBTILIS; BACTERIAL STRAIN; BACTERIUM CULTURE; BIOMASS FERMENTATION; BIOREACTOR; CHEMICAL STRUCTURE; CHIRALITY; DELETION MUTANT; ESCHERICHIA COLI; GENE DELETION; GENE INSERTION; GENE SILENCING; METABOLIC ENGINEERING; MOLECULAR CLONING; NONHUMAN; PLASMID; PROTEIN ANALYSIS; PROTOPLAST ISOLATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SACCHARIFICATION; STEREOCHEMISTRY;

BACILLUS; BUTYLENE GLYCOLS; FERMENTATION; GENE DELETION; GENE KNOCKOUT TECHNIQUES; GLUCOSE; INDUSTRIAL MICROBIOLOGY; L-LACTATE DEHYDROGENASE; METABOLIC ENGINEERING; XYLOSE;

BACILLUS LICHENIFORMIS; KLEBSIELLA PNEUMONIAE;

EID: 84862800921     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.24427     Document Type: Article

References (57)

1. Anvari M, Safari Motlagh MR. 2011. Enhancement of 2, 3-butanediol production by Klebsiella oxytoca PTCC 1402. J Biomed Biotechnol 2011: 636170.
2. Asanuma N, Iwamoto M, Hino T. 1999. Structure and transcriptional regulation of the gene encoding pyruvate formate-lyase of a ruminal bacterium, Streptococcus bovis Microbiology 145(Pt 1): 151-157.
3. Biebl H, Zeng AP, Menzel K, Deckwer WD. 1998. Fermentation of glycerol to 1, 3-propanediol and 2, 3-butanediol by Klebsiella pneumoniae Appl Microbiol Biotechnol 50(1): 24-29.
4. Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
5. Celinska E, Grajek W. 2009. Biotechnological production of 2, 3-butanediol-Current state and prospects. Biotechnol Adv 27(6): 715-725.
6. Chang S, Cohen SN. 1979. High frequency transformation of Bacillus subtilis protoplasts by plasmid DNA. Mol Gen Genet 168(1): 111-115.
7. Cheng JS, Yuan YJ. 2006. Proteomic analysis reveals the spatial heterogeneity of immobilized Taxus cuspidata cells in support matrices. Proteomics 6(7): 2199-2207.
8. Chuang LF, Collins EB. 1968. Biosynthesis of diacetyl in bacteria and yeast. J Bacteriol 95(6): 2083-2089.
9. Converti A, Perego P, Del Borghi M. 2003. Effect of specific oxygen uptake rate on Enterobacter aerogenes energetics: Carbon and reduction degree balances in batch cultivations. Biotechnol Bioeng 82(3): 370-377.
10. De Mas C, Jansen NB, Tsao GT. 1988. Production of optically active 2, 3-butanediol by Bacillus polymyxa Biotechnol Bioeng 31(4): 366-377.
11. Gray O, Chang S. 1981. Molecular cloning and expression of Bacillus licheniformis beta-lactamase gene in Escherichia coli and Bacillus subtilis J Bacteriol 145(1): 422-428.
12. Hanahan D. 1983. Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166(4): 557-580.
13. Holtzclaw WD, Chapman LF. 1975. Degradative acetolactate synthase of Bacillus subtilis: Purification and properties. J Bacteriol 121(3): 917-922.
14. Jensen KK, Hulett FM. 1989. Protoplast transformation of Bacillus licheniformis MC14. J Gen Microbiol 135(8): 2283-2287.
15. Ji XJ, Huang H, Li S, Du J, Lian M. 2008. Enhanced 2, 3-butanediol production by altering the mixed acid fermentation pathway in Klebsiella oxytoca Biotechnol Lett 30(4): 731-734.
16. Ji XJ, Huang H, Ouyang PK. 2011. Microbial 2, 3-butanediol production: A state-of-the-art review. Biotechnol Adv 29(3): 351-364.
17. Ji XJ, Huang H, Zhu JG, Ren LJ, Nie ZK, Du J, Li S. 2010. Engineering Klebsiella oxytoca for efficient 2, 3-butanediol production through insertional inactivation of acetaldehyde dehydrogenase gene. Appl Microbiol Biotechnol 85(6): 1751-1758.
18. Juni E, Heym GA. 1956. A cyclic pathway for the bacterial dissimilation of 2, 3-butanediol, acetylmethylcarbinol, and diacetyl. I. General aspects of the 2, 3-butanediol cycle. J Bacteriol 71(4): 425-432.
19. Keggins KM, Lovett PS, Duvall EJ. 1978. Molecular cloning of genetically active fragments of Bacillus DNA in Bacillus subtilis and properties of the vector plasmid pUB110. Proc Natl Acad Sci USA 75(3): 1423-1427.
20. Keller A, Nesvizhskii AI, Kolker E, Aebersold R. 2002. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal Chem 74(20): 5383-5392.
21. Kim Y, Ingram LO, Shanmugam KT. 2008. Dihydrolipoamide dehydrogenase mutation alters the NADH sensitivity of pyruvate dehydrogenase complex of Escherichia coli K-12. J Bacteriol 190(11): 3851-3858.
22. Kok J, van der Vossen JM, Venema G. 1984. Construction of plasmid cloning vectors for lactic streptococci which also replicate in Bacillus subtilis and Escherichia coli Appl Environ Microbiol 48(4): 726-731.
23. Laemmli UK. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227(5259): 680-685.
24. Ma C, Wang A, Qin J, Li L, Ai X, Jiang T, Tang H, Xu P. 2009. Enhanced 2, 3-butanediol production by Klebsiella pneumoniae SDM. Appl Microbiol Biotechnol 82(1): 49-57.
25. Magee RJ, Kosaric N, Allen IL. 1987. The microbial production of 2, 3-butanediol. Adv Appl Microbiol 32: 89-161.
26. Marwoto B, Nakashimada Y, Kakizono T, Nishio N. 2004. Metabolic analysis of acetate accumulation during xylose consumption by Paenibacillus polymyxa Appl Microbiol Biotechnol 64(1): 112-119.
27. Miller J. 1992. A short course in bacteria genetics: A laboratory manual and handbook for Escherichia coli and related bacteria. Plainview, NY: Cold Spring Harbor Laboratory Press.
28. Monnet C, Phalip V, Schmitt P, Diviès C. 1994. Comparison of α-acetolactate synthase and α-acetolactate decarboxylase in Lactococcus spp. and Leuconostoc spp Biotechnol Lett 16(3): 257-262.
29. Nakashimada Y, Marwoto B, Kashiwamura T, Kakizono T, Nishio N. 2000. Enhanced 2, 3-butanediol production by addition of acetic acid in Paenibacillus polymyxa J Biosci Bioeng 90(6): 661-664.
30. Nilegaonkar SS, Bhosale SB, Dandage CN, Kapadi AH. 1996. Potential of Bacillus licheniformis for the production of 2, 3-butanediol. J Ferment Bioeng 82(4): 408-410.
31. Ou MS, Mohammed N, Ingram LO, Shanmugam KT. 2009. Thermophilic Bacillus coagulans requires less cellulases for simultaneous saccharification and fermentation of cellulose to products than mesophilic microbial biocatalysts. Appl Biochem Biotechnol 155(1-3): 379-385.
32. Patel MA, Ou MS, Harbrucker R, Aldrich HC, Buszko ML, Ingram LO, Shanmugam KT. 2006. Isolation and characterization of acid-tolerant, thermophilic bacteria for effective fermentation of biomass-derived sugars to lactic acid. Appl Environ Microbiol 72(5): 3228-3235.
33. Perego P, Converti A, Del Borghi A, Canepa P. 2000. 2, 3-Butanediol production by Enterobacter aerogenes: Selection of the optimal conditions and application to food industry residues. Bioprocess Biosyst Eng 23(6): 613-620.
34. Perego P, Converti A, Del Borghi M. 2003. Effects of temperature, inoculum size and starch hydrolyzate concentration on butanediol production by Bacillus licheniformis Bioresour Technol 89(2): 125-131.
35. Petrov K, Petrova P. 2009. High production of 2, 3-butanediol from glycerol by Klebsiella pneumoniae G31. Appl Microbiol Biotechnol 84(4): 659-665.
36. Rhee MS, Kim JW, Qian Y, Ingram LO, Shanmugam KT. 2007. Development of plasmid vector and electroporation condition for gene transfer in sporogenic lactic acid bacterium, Bacillus coagulans Plasmid 58(1): 13-22.
37. Sambrook J, Russell DW. 2001. Molecular cloning: A laboratory manual. New York: Cold Spring Harbor Laboratory Press.
38. Siemerink MA, Kuit W, Lopez Contreras AM, Eggink G, van der Oost J, Kengen SW. 2011. D-2, 3-butanediol production due to heterologous expression of an acetoin reductase in Clostridium acetobutylicum Appl Environ Microbiol 77(8): 2582-2588.
39. Su Y, Rhee MS, Ingram LO, Shanmugam KT. 2011. Physiological and fermentation properties of Bacillus coagulans and a mutant lacking fermentative lactate dehydrogenase activity. J Ind Microbiol Biotechnol 38(3): 441-450.
40. Syu MJ. 2001. Biological production of 2, 3-butanediol. Appl Microbiol Biotechnol 55(1): 10-18.
41. Ui S, Hosaka T, Mizutani K. 1984. Separation and quantitation of acetoin isomers (D(-) and L(+)) by a combined use of enzyme and gas chromatography. Agric Biol Chem 48(11): 2835-2836.
42. Ui S, Hosaka T, Watanabe K, Mimura A. 1998. Discovery of a new mechanism of 2, 3-butanediol stereoisomer formation in Bacillus cereus YUF-4. J Ferment Bioeng 85(1): 79-83.
43. Ui S, Masuda T, Masuda H, Muraki H. 1986. Mechanism for the formation of 2, 3-butanediol stereoisomers in Bacillus polymyxa J Ferment Technol 64(6): 481-486.
44. Van Houdt R, Givskov M, Michiels CW. 2007. Quorum sensing in Serratia. FEMS Microbiol Rev 31(4): 407-424.
45. Veith B, Herzberg C, Steckel S, Feesche J, Maurer KH, Ehrenreich P, Baumer S, Henne A, Liesegang H, Merkl R, Ehrenreich A, Gottschalk G. 2004. The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. J Mol Microbiol Biotechnol 7(4): 204-211.
46. Wang Q, Chen X, Yang Y, Zhao X. 2006. Genome-scale in silico aided metabolic analysis and flux comparisons of Escherichia coli to improve succinate production. Appl Microbiol Biotechnol 73(4): 887-894.
47. Wang Q, Ou MS, Kim Y, Ingram LO, Shanmugam KT. 2010. Metabolic flux control at the pyruvate node in an anaerobic Escherichia coli strain with an active pyruvate dehydrogenase. Appl Environ Microbiol 76(7): 2107-2114.
48. Wang Q, Ingram LO, Shanmugam KT. 2011a. Evolution of D-lactate dehydrogenase activity from glycerol dehydrogenase and its utility for D-lactate production from lignocellulose. Proc Natl Acad Sci USA 108(47): 18920-18925.
49. Wang Q, Zhao X, Chamu J, Shanmugam KT. 2011b. Isolation, characterization and evolution of a new thermophilic Bacillus licheniformis for lactic acid production in mineral salts medium. Bioresour Technol 102: 8152-8158.
50. Yamada T, Takahashi-Abbe S, Abbe K. 1985. Effects of oxygen on pyruvate formate-lyase in situ and sugar metabolism of Streptococcus mutants and Streptococcus sanguis Infect Immun 47(1): 129-134.
51. Yanisch-Perron C, Vieira J, Messing J. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33(1): 103-119.
52. Yoshida A, Freese E. 1975. Lactate dehydrogenase from Bacillus subtilis Methods Enzymol 41: 304-309.
53. Yoshida N, Kodama K, Nakata K, Yamashita M, Miwa T. 2002. Escherichia coli cells penetrated by chrysotile fibers are transformed to antibiotic resistance by incorporation of exogenous plasmid DNA. Appl Microbiol Biotechnol 60(4): 461-468.
54. Young FE, Spizizen J. 1963. Incorporation of deoxyribonucleic acid in the Bacillus subtilis transformation system. J Bacteriol 86: 392-400.
55. Zeng AP, Sabra W. 2011. Microbial production of diols as platform chemicals: Recent progresses. Curr Opin Biotechnol 22(6): 749-757.
56. Zhang L, Sun J, Hao Y, Zhu J, Chu J, Wei D, Shen Y. 2010a. Microbial production of 2, 3-butanediol by a surfactant (serrawettin)-deficient mutant of Serratia marcescens H30. J Ind Microbiol Biotechnol 37(8): 857-862.
57. Zhang L, Yang Y, Sun J, Shen Y, Wei D, Zhu J, Chu J. 2010b. Microbial production of 2, 3-butanediol by a mutagenized strain of Serratia marcescens H30. Bioresour Technol 101(6): 1961-1967.