Screening and partial characterization of Bacillus with potential applications in biocontrol of cucumber Fusarium wilt

Crop Protection

Volumn 35, Issue , 2012, Pages 29-35

  Li, Lihua ^a   Ma, Jincai ^b   Li, Yan ^a   Wang, Zhiyu ^c   Gao, Tantan ^a   Wang, Qi ^a  

^a CHINA AGRICULTURAL UNIVERSITY   (China)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c TSINGHUA UNIVERSITY   (China)

Author keywords

Bacillus subtilis; Biocontrol; Cucumber; Fusarium oxysporum f. sp. cucumerinum; Gnotobiotic system

Indexed keywords

ANTAGONISM; BACTERIAL DISEASE; BIOCHEMICAL COMPOSITION; BIOCONTROL AGENT; CROP YIELD; FATTY ACID; FUNGAL DISEASE; GREENHOUSE ECOSYSTEM; MORPHOLOGY; PHYLOGENETICS; PHYSIOLOGICAL RESPONSE; SEEDLING; VINE; YIELD RESPONSE;

CHINA;

BACILLUS SUBTILIS; CUCUMIS SATIVUS; FUSARIUM; FUSARIUM OXYSPORUM; FUSARIUM OXYSPORUM F. SP. CUCUMERINUM; SOLANUM TUBEROSUM;

EID: 84862795410     PISSN: 02612194     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cropro.2011.12.004     Document Type: Article

References (41)

1. Ahn I.P., Chung H.S., Lee Y.H. Vegetative compatibility groups and pathogenicity among isolates of Fusarium oxysporum f. sp. cucumerinum. Plant Dis. 1997, 82:244-246.
2. Bais H.P., Fall R., Vivanco J.M. Biocontrol of Bacillus subtilis against infection of arabidopsis roots by Pseudomonas syringae is facilitated by biofilm formation and surfactin production. Plant Physiol. 2004, 134:307-319.
3. Cavaglieri L.R., Passone1 A., Etcheverry M.G. Correlation between screening procedures to select root endophytes for biological control of Fusarium verticillioides in Zea mays L. Biol. Control 2004, 31:259-267.
4. Cazorla F.M., Romero D., Pé rez-Garciá A., Lugtenberg B.J.J., Vicente A.D., Bloemberg G. Isolation and characterization of antagonistic Bacillus subtilis strains from the avocado rhizoplane displaying biocontrol activity. J. Appl. Microbiol. 2007, 103:1950-1959.
5. Chen F., Wang M., Zheng Y., Luo J., Yang X., Wang X. Quantitative changes of plant defense enzymes and phytohormone in biocontrol of cucumber Fusarium wilt by Bacillus subtilis B579. World J. Microbiol. Biotechnol. 2010, 26:675-684.
6. Chun J., Bae K.S. Phylogenetic analysis of Bacillus subtilis and related taxa based on partial gyrA gene sequence. Antonie Leeuwenhoek 2000, 78(2):123-127.
7. Chung S., Kong H., Buyer J.S., Lakshman D.K., Lydon J., Kim S.D., Roberts D.P. Isolation and partial characterization of Bacillus subtilis ME488 for suppression of soilborne pathogens of cucumber and pepper. Appl. Microbiol. Biotechnol. 2008, 80:115-123.
8. Coutte F., Lecle' re V., Bé chet M., Guez J.S., Lecouturier D., Chollet-Imbert M., Dhulster P., Jacques P. Effect of pps disruption and constitutive expression of srfA on surfactin productivity, spreading and antagonistic properties of Bacillus subtilis 168 derivatives. J. Appl. Microbiol. 2010, 109:480-491.
9. Gajbhiye A., Rai A.R., Meshram S.U., Dongre A.B. Isolation, evaluation and characterization of Bacillus subtilis from cotton rhizospheric soil with biocontrol activity against Fusarium oxysporum. World J Microbiol Biotechnol 2010, 26:1187-1194.
10. Gullino M.L., Camponogara A., Gasparrini G., Rizzo V., Clini C., Garibaldi A. Replacing methyl bromide for soil disinfestations-the Italian experience and implications for other countries. Plant Dis. 2003, 87:1012-1021.
11. Haggag W.M., Timmusk S. Colonization of peanut roots by biofilm-forming Paenibacillus polymyxa initiates biocontrol against crown rot disease. J. Appl. Microbiol. 2007, 104:961-969.
12. Johnston T.D. Clubroot in Brassica: a standard inoculation technique and the specification of races. Plant Pathol. 1968, 17:184-187.
13. Kavroulakis N., Ntougias S., Besi M.I., Katsou P., Damaskinou A., Ehaliotis C., Zervakis G.I., Papadopoulou K.K. Antagonistic bacteria of composted agro-industrial residues exhibit antibiosis against soil-borne fungal plant pathogens and protection of tomato plants from Fusarium oxysporum f.sp. radicis-lycopersici. Plant Soil 2010, 333:233-247.
14. Kloepper J.W., Ryu C.M., Zhang S. Induced systemic resistance and promotion of plant growth by Bacillus spp. Phytopathology 2004, 94:1259-1266.
15. Knapp B.A., Seeber J., Podmirseg S.M., Rief A., Meyer E., Insam H. Molecular fingerprinting analysis of the gut microflora of Cylindroiulus fulviceps (Diplopoda). Pedobiologia 2009, 52:325-336.
16. Koumoutsi A., Chen X.H., Henne A., Liesegang H., Hitzeroth G., Franke P., Vater J., Borriss R. Structural and functional characterization of gene clusters directing nonribosomal synthesis of bioactive cyclic lipopeptides in Bacillus amyloliquefaciens strain FZB42. J. Bacteriol. 2004, 186:1084-1096.
17. Larkin R.P., Fravel D.R. Mechanisms of action and dose response relationships governing biological control of Fusarium wilt of tomato by nonpathogenic Fusarium spp. Phytopathology 1999, 89:1152-1161.
18. Liu L., Kloepper J.W., Tuzm S. Induction of systemic resistance in cucumber against Fusarium wilt by plant growth-promoting rhizobacteria. Phytopathology 1995, 85:695-698.
19. Minuto A., Spadaro D., Garibaldi A., Gullino M.L. Control of soilborne pathogens of tomato using a commercial formulation of Streptomyces griseoviridis and solarization. Crop Prot. 2006, 25:468-475.
20. Morikawa M., Kagihiro S., Haruki M., Takano K., Branda S., Kolter R., Kanaya S. Biofilm formation by a Bacillus subtilis strain that produces γ-polyglutamate. Microbiology 2006, 152:2801-2807.
21. Murashige T., Skoog F. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant 1962, 15:473-497.
22. Nakano M.M., Corbell N., Besson J., Zuber P. Isolation and characterization of sfp: a gene that functions in the production of the lipopeptide biosurfactant, surfactin Bacillus subtilis. Mol. Gen. Genet. 1992, 232:313-321.
23. Oldenburg K.R., Vo K.T., Ruhland B., Schatz P.J., Yuan Z. A dual culture assay for detection of antimicrobial activity. J. Biomol. Screen. 1996, 1:123-130.
24. Omar I., O'Neill T.M., Rossall S. Biological control of Fusarium crown and root rot of tomato with antagonistic bacteria and integrated control when combined with the fungicide carbendazim. Plant Pathol. 2006, 55:92-99.
25. Pavloua G.C., Vakalounakis D.J. Biological control of root and stem rot of greenhouse cucumber, caused by Fusarium oxysporum f. sp. radicis-cucumerinum, by lettuce soil amendment. Crop Prot. 2005, 24:135-140.
26. Raza W., Yang X., Wu H., Wang Y., Xu Y., Shen Q. Isolation and characterization of fusaricidin type compounds producing strain of Paenibacillus polymyxa SQR-21 active against Fusarium Oxysporum F. sp. nevium. Eur. J. Plant Pathol. 2009, 125:475-483.
27. Roberts M.S., Nakamura L.K., Cohan F.M. Bacillus mojavensis sp. nov., distinguishable from Bacillus subtilis by sexual isolation, divergence in DNA sequence, and differences in fatty acid composition. Int. J. Syst. Bacteriol. 1994, 44:256-264.
28. Rodgers P.B. Potential of biological control organisms as a source of antifungal compounds for agrochemical and pharmaceutical product development. Pest Sci. 1989, 27:155-164.
29. Simons M., Van der Bij A.J., Brand L., De Weger L.A., Wijffelman C.A., Lugtenberg B.J. Gnotobiotic system for studying rhizosphere colonization by plant growth-promoting Pseudomonad bacteria. Mol. Plant Microbe Interact. 1996, 9:600-607.
30. Singh P.P., Shin Y.C., Park C.S., Chung Y.R. Biological control of Fusarium wilt of cucumber by chitinolytic bacteria. Phytopathology 1999, 89:92-99.
31. Stein T. Bacillus subtilis antibiotics: structures, syntheses and specific functions. Mol. Microbiol. 2005, 56:845-857.
32. Swadling I.R., Jeffries P. Isolation of microbial antagonists for biocontrol of grey mold disease of strawberry. Biocontrol Sci. Technol. 1996, 6:125-136.
33. Szczech M., Shoda M. The effect of mode of application of Bacillus subtilis RB14-C on its efficacy as a biocontrol agent against Rhizoctonia solani. J. Phytopathol. 2006, 154:370-377.
34. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary Genetic Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
35. Timmusk S., Grantcharova N., Wagner E.G.H. Paenibacillus polymyxa invades plant roots and forms biofilms. Appl. Environ. Microbiol. 2005, 71:7292-7300.
36. Tok F.M., Kurt Ş. Pathogenicity, vegetative compatibility and amplified fragment length polymorphism (AFLP) analysis of Fusarium oxysporum f. sp. radicis-cucumerinum isolates from Turkish greenhouses. Phytoparasitica 2010, 38:253-260.
37. Trofymow J.A., Gurnsey J., Coleman D.C. A gnotobiotic plant microcosm. Plant Soil 1980, 55:167-170.
38. Vakalounakis D.J., Wang Z., Fragkiadakis G.A., Skaracis G.N., Li D.B. Characterization of Fusarium oxysporum isolates obtained from cucumber in China by pathogenicity, VCG, and RAPD. Plant Dis. 2004, 88:645-649.
39. Wang L.T., Lee F.L., Tai C.J., Kasai H. Comparison of gyrB gene sequences, 16S rRNA gene sequences and DNA-DNA hybridization in the Bacillus subtilis group. Int. J. Syst. Evolut. Microbiol. 2007, 57:1846-1850.
40. Weller D.M. Biological control of soil-born plant pathogens in the rhizosphere with bacteria. Ann. Rev. Phytopthol 1988, 26:379-407.
41. Zhang S., Raza W., Yang X., Hu J., Huang Q., Xu Y., Liu X., Ran W., Shen Q. Control of Fusarium wilt disease of cucumber plants with the application of a bioorganic fertilizer. Biol. Fertil. Soils 2008, 44:1073-1080.