Internally deleted WNV genomes isolated from exotic birds in New Mexico: Function in cells, mosquitoes, and mice

Virology

Volumn 427, Issue 1, 2012, Pages 10-17

  Pesko, Kendra N ^a   Fitzpatrick, Kelly A ^a   Ryan, Elizabeth M ^b   Shi, Pei Yong ^c   Zhang, Bo ^d   Lennon, Niall J ^b   Newman, Ruchi M ^b   Henn, Matthew R ^b   Ebel, Gregory D ^a  

^a UNIVERSITY OF NEW MEXICO SCHOOL OF MEDICINE   (United States)

^b BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^c WADSWORTH CENTER   (United States)

^d WUHAN INSTITUTE OF VIROLOGY   (China)

Author keywords

Defective interfering particles; Genetic variation; West Nile virus

Indexed keywords

NONSTRUCTURAL PROTEIN 1;

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; BIRD; CONTROLLED STUDY; EXOTIC SPECIES; FEMALE; GENE DELETION; MOSQUITO; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; UNITED STATES; VIROGENESIS; VIRUS ENVELOPE; VIRUS GENOME; VIRUS ISOLATION; VIRUS MUTANT; VIRUS PATHOGENESIS; VIRUS TITRATION; WEST NILE FEVER; WEST NILE FLAVIVIRUS;

AMINO ACID SUBSTITUTION; ANIMALS; BIRDS; CELLS, CULTURED; CERCOPITHECUS AETHIOPS; CRICETINAE; CULICIDAE; DEFECTIVE VIRUSES; GENE DELETION; GENOME, VIRAL; KIDNEY; MICE; MICE, INBRED C3H; MICE, INBRED C57BL; MUTATION; NEW MEXICO; RNA, VIRAL; VERO CELLS; VIRAL ENVELOPE PROTEINS; VIRAL NONSTRUCTURAL PROTEINS; VIRUS REPLICATION; WEST NILE VIRUS;

AVES; FLAVIVIRUS; MUS; RNA VIRUSES; VERTEBRATA; WEST NILE VIRUS;

EID: 84862793341     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2012.01.028     Document Type: Article

References (33)

1. Aaskov J., Buzacott K., Thu H.M., Lowry K., Holmes E.C. Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes. Science 2006, 311:236.
2. Anderson S.L., Richards S.L., Tabachnick W.J., Smartt C.T. Effects of West Nile virus dose and extrinsic incubation temperature on temporal progression of vector competence in Culex Pipiens Quinquefasciatus. J. Am. Mosq. Control Assoc. 2010, 26:103.
3. Armstrong P.M., Vossbrinck C.R., Andreadis T.G., Anderson J.F., Pesko K.N., Newman R.M., et al. Molecular Evolution of West Nile Virus in a Northern Temperate Region: Connecticut, USA 1999-2008. Virology 2011, 417:203-210.
4. Artsob H., Gubler D., Enria D., Morales M., Pupo M., Bunning M., et al. West Nile virus in the new world: trends in the spread and proliferation of West Nile Virus in the western hemisphere. Zoonoses Public Health 2009, 56:357-369.
5. Barrett A.D.T., Dimmock N.J. Modulation of a systemic Semliki Forest virus infection in mice by defective interfering particles. J. Gen. Virol. 1984, 65:1827-1831.
6. Brackney D.E., Beane J.E., Ebel G.D. RNAi targeting of West Nile Virus in mosquito midguts promotes virus diversification. PLoS Pathog. 2009, 5:e1000502.
7. Brackney D.E., Pesko K.N., Brown I.K., Deardorff E.R., Kawatachi J., Ebel G.D. West Nile virus genetic diversity is maintained during transmission by Culex pipiens quinquefasciatus mosquitoes. PLoS ONE 2011, 6:e24466.
8. Brinton M.A. Analysis of extracellular West Nile virus particles produced by cell cultures from genetically resistant and susceptible mice indicates enhanced amplification of defective interfering particles by resistant cultures. J. Virol. 1983, 46:860.
9. Brinton M.A. Host factors involved in West Nile Virus replication. Ann. N. Y. Acad. Sci. 2001, 951:207-219.
10. Brown A.N., Kent K.A., Bennett C.J., Bernard K.A. Tissue tropism and neuroinvasion of West Nile virus do not differ for two mouse strains with different survival rates. Virology 2007, 368:422-430.
11. Debnath N.C., Tiernery R., Sil B.K., Wills M.R., Barrett A.D.T. In vitro homotypic and heterotypic interference by defective interfering particles of West Nile virus. J. Gen. Virol. 1991, 72:2705-2711.
12. Ebel G.D., Carricaburu J., Young D., Bernard K.A., Kramer L.D. Genetic and phenotypic variation of West Nile Virus in New York, 2000-2003. Am. J. Trop. Med. Hyg. 2004, 71:493-500.
13. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
14. Holland J., Spindler K., Horodyski F., Grabau E., Nichol S., VandePol S. Rapid evolution of RNA genomes. Science 1982, 215:1577.
15. Holmes E.C. The evolutionary genetics of emerging viruses. Annu. Rev. Ecol. Evol. Syst. 2009, 40:353.
16. Jenkins G.M., Rambaut A., Pybus O.G., Holmes E.C. Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. J. Mol. Evol. 2002, 54:156-165.
17. Jerzak G., Bernard K.A., Kramer L.D., Ebel G.D. Genetic variation in West Nile virus from naturally infected mosquitoes and birds suggests quasispecies structure and strong purifying selection. J. Gen. Virol. 2005, 86:2175-2183.
18. Komar N., Clark G.G. West Nile Virus activity in Latin America and the Caribbean. Rev. Panam. Salud Publica 2006, 19:112-117.
19. Lancaster M.U., Hodgetts S.I., Mackenzie J.S., Urosevic N. Characterization of defective viral RNA produced during persistent infection of vero cells with Murray valley encephalitis virus. J. Virol. 1998, 72:2474.
20. Li D., Lott W.B., Lowry K., Jones A., Thu H.M., Aaskov J. Defective interfering viral particles in acute dengue infections. PlosONE 2011, 6:e19447.
21. Lindsey H.S., Calisher C.H., Mathews J.H. Serum dilution neutralization test for California group virus identification and serology. J. Clin. Microbiol. 1976, 4:503.
22. Mertens E., Kajaste-Rudnitski A., Torres S., Funk A., Frenkiel M.P., Iteman I., et al. Viral determinants in the NS3 helicase and 2K peptide that promote West Nile virus resistance to antiviral action of 2',5'-oligoadenylate synthetase 1b. Virology 2010, 399:176-185.
23. Murray K.O., Mertens E., Desprès P. West Nile virus and its emergence in the United States of America. Vet. Res. 2010, 41:67.
24. Posada D. JModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25:1253.
25. Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572.
26. Shi P.Y., Tilgner M., Lo M.K., Kent K.A., Bernard K.A. Infectious cDNA clone of the Epidemic West Nile virus from New York City. J. Virol. 2002, 76:5847.
27. Thompson K.A.S., Rempala G.A., Yin J. Multiple-hit inhibition of infection by defective interfering particles. J. Gen. Virol. 2009, 90:888-899.
28. Tsai K.N., Tsang S.F., Huang C.H., Chang R.Y. Defective interfering RNAs of Japanese encephalitis virus found in mosquito cells and correlation with persistent infection. Virus Res. 2007, 124:139-150.
29. Weaver S.C. Evolutionary influences in arboviral disease. Curr. Top. Microbiol. Immunol. 2006, 299:285-314.
30. Wright T.F., Schirtzinger E.E., Matsumoto T., Eberhard J.R., Graves G.R., Sanchez J.J., et al. A multilocus molecular phylogeny of the parrots (Psittaciformes): support for a Gondwanan origin during the Cretaceous. Mol. Biol. Evol. 2008, 25:2141.
31. Yoon S.W., Lee S.Y., Won S.Y., Park S.H., Park S.Y., Jeong Y.S. Characterization of homologous defective interfering RNA during persistent infection of vero cells with Japanese encephalitis virus. Mol. Cells 2006, 21:112-120.
32. Zou G., Puig-Basagoiti F., Zhang B., Qing M., Chen L., Pankiewicz K.W., et al. A single-amino acid substitution in West Nile virus 2K peptide between NS4A and NS4B confers resistance to lycorine, a flavivirus inhibitor. Virology 2009, 384:242-252.
33. Zou G., Zhang B., Lim P.Y., Yuan Z., Bernard K.A., Shi P.Y. Exclusion of West Nile virus superinfection through RNA replication. J. Virol. 2009, 83:11765-11776.