Characterization of homologous defective interfering RNA during persistent infection of Vero cells with Japanese encephalitis virus

Molecules and Cells

Volumn 21, Issue 1, 2006, Pages 112-120

  Yoon, Sung Wook ^a   Lee, Sang Yong ^a   Won, Sung Yong ^a   Park, Sun Hee ^a   Park, Soo Young ^a   Jeong, Yong Seok ^a  

^a Kyung Hee University   (South Korea)

Author keywords

Defective interfering RNA; Japanese encephalitis virus; Persistent infection

Indexed keywords

RNA; VIRUS RNA;

5' UNTRANSLATED REGION; ARTICLE; CELL CLONE; DEFECTIVE VIRUS; EPIDEMIC ENCEPHALITIS; GENE DELETION; HELPER VIRUS; HUMAN; HUMAN CELL; JAPANESE ENCEPHALITIS VIRUS; MOLECULAR BIOLOGY; NONHUMAN; OPEN READING FRAME; PERSISTENT VIRUS INFECTION; RNA INTERFERENCE; VERO CELL; VIROGENESIS; VIRUS CULTURE; VIRUS IDENTIFICATION; VIRUS VIRULENCE; AMINO ACID SEQUENCE; ANIMAL; CERCOPITHECUS; CYTOPATHOGENIC EFFECT; GENETICS; HAMSTER; MOLECULAR GENETICS; PHYSIOLOGY; VIRUS GENOME; VIRUS INTERFERENCE; VIRUS REPLICATION;

JAPANESE ENCEPHALITIS VIRUS;

AMINO ACID SEQUENCE; ANIMALS; CERCOPITHECUS AETHIOPS; CRICETINAE; CYTOPATHOGENIC EFFECT, VIRAL; DEFECTIVE VIRUSES; ENCEPHALITIS VIRUS, JAPANESE; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; RNA, VIRAL; SERIAL PASSAGE; VERO CELLS; VIRAL INTERFERENCE; VIRUS REPLICATION;

EID: 33645743704     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (48)

1. Atkinson, T., Barrett, A. D. T., Mackenzie, A., and Dimmock, N. J. (1986) Persistence of virulent Semliki Forest virus in mouse brain following co-inoculation with defective interfering particles. J. Gen. Virol. 67, 1189-1194.
2. Barrett, A. D. T. and Dimmock, N. J. (1984) Modulation of Semliki Forest virus-induced infection of mice by defective interfering virus. J. Infect. Dis. 150, 98-103.
3. Blackwell, J. L. and Brinton, M. A. (1995) BHK cell proteins that bind to the 3′ stem-loop structure of the West Nile virus genome RNA. J. Virol. 69, 5650-5658.
4. Brinton, M. A. (1982) Characterization of West Nile virus persistent infections in genetically resistant and susceptible mouse cells. I. Generation of defective non-plaquing virus particles. Virology 116, 84-98.
5. Brinton, M. A. (1986) Replication of flaviviruses; in The Togaviridae and Flaviviridae, Schlesinger, S. and Schlesinger, M. J. (eds.), pp. 327-374, Plenum Press, New York.
6. Burivong, P., Pattanakitsakul, S. N., Thongrungkiat, S., Malasit, P., and Flegel, T. W. (2004) Markedly reduced severity of Dengue virus infection in mosquito cell cultures persistently infected with Aedes albopictus densovirus (AalDNV). Virology 329, 261-269.
7. Cave, D. R., Hendrickson, F. M., and Huang, A. S. (1985) Defective interfering virus particles modulate virulence. J. Virol. 55, 366-373.
8. Chambers, T. J., Hahn, C. S., Galler, R., and Rice, C. M. (1990) Flavivirus genome organization, expression and replication. Ann. Rev. Microbiol. 44, 649-688.
9. Chen, L. K., Liao, C. L., Lin, C. G., Lai, S. C., Liu, C. I., et al. (1996) Persistence of Japanese encephalitis virus is associated with abnormal expression of the non-structural protein NS1 in host cell. Virology 217, 220-229.
10. Ding, X., Wu, X., Duan, T., Siirin, M., Guzman, H., et al. (2005) Nucleotide and amino acid changes in West Nile virus strains exhibiting renal tropism in hamsters. Am. Trop. Med. Hyg. 73, 803-807.
11. Feng, G., Takegami, T., and Zhao, G. (2002) Characterization and E protein expression of mutant strains during persistent infection of KN73 cells with Japanese encephalitis virus. Chin. Med. J. 115, 1324-1327.
12. Holland, J. J. (1990) Defective viral genomes; in Fields Virology, Fields et al. (eds.), pp. 151-165, Raven Press, New York.
13. Holland, J. J., Villarreal, L. P., Welsh, R. M., Oldstone, M. B. A., Kohne, D., et al. (1976) Long-term persistent vesicular stomatitis virus and rabies virus infections of cells in vitro. J. Gen. Virol. 33, 193-211.
14. Huang, A. S. and Baltimore, D. (1970) Defective viral particles and viral disease processes. Nature 226, 325-327.
15. Kajigaya, S., Arakawa, H., Kuge, S., Koi, T., Imura, N., et al. (1985) Isolation and characterization of defective-interfering particles of poliovirus Sabin 1 strain. Virology 142, 307-316.
16. Kasahara, S., Ueda, M., Okamoto, Y., Yashida, S., and Yamada, R. (1936) Experimental study on Japanese encephalitis; 1, The passage and properties of virus. Tokyo 1 shinish 2954, 2806-2811.
17. Lancaster, M. U., Hodgetts, S. I., Mackenzie, J. S., and Urosevic, N. (1998) Characterization of defective viral RNA produced during persistent infection of Vero cells with Murray Valley encephalitis virus. J. Virol. 72, 2474-2482.
18. Liao, C. L., Lin, Y. L., Shen, S. C., Shen, J. Y., Su, H. L., et al. (1998) Antiapoptotic but not antiviral function of human bcl-2 assists establishment of Japanese encephalitis virus persistence in cultured cells. J. Virol. 72, 9844-9854.
19. Mackenzie, J. M., Jones, M. K., and Young, P. R., (1996) Immunolocalization of the dengue virus nonstructural glycoprotein NS1 suggests a role in viral RNA replication. Virology 220, 232-240.
20. Marschall, M., Meier-Ewert, H., Herrler, G., Zimmer, G., and Maassab, H. F. (1997) The cell receptor level is reduced during persistent infection with influenza C virus. Arch. Virol. 142, 1155-1164.
21. Mathur, A., Arora, K. L., Rawat, S., and Chaturvedi, U. C. (1986) Persistence reactivation and latency of Japanese encephalitis virus infection in mice. J. Gen. Virol. 67, 381-385.
22. Monath, T. P. C. (1971) Neutralizing antibody responses in the major immunoglobulin classes to yellow fever 17D vaccination of humans. Am. J. Epidemiol. 93, 123-129.
23. Monath, T. P. C. (1986) Pathology of flaviviruses; in The Togaviridae and Flaviviridae, Schlesinger, S. and Schlesinger, M. J. (eds). pp. 375-440, Plenum Press, New York.
24. Muylaert, I. R., Galler, R., and Rice, C. M. (1997) Genetic analysis of the yellow fever virus NS1 protein: identification of a temperature-sensitive mutation which blocks RNA accumulation. J. Virol. 71, 291-298.
25. Nayak, D. (1980) Influenza virus defective interfering particles. Ann. Rev. Microbiol. 34, 619-644.
26. Park, J., Hwang, H., Shim, H., Im, K., Auh, C. K., et al. (2004) Altered cell shapes, hyperplasia, and secondary growth in Arabidopsis caused by beet curly top geminivirus infection. Mol. Cells 17, 117-124.
27. Perrault, J. (1981) Origins and replication of defective interfering particles. Curr. Top. Microbiol. Immunol. 93, 151-207.
28. Poidinger, M., Coelen, R. J., and Mackenzie, J. S. (1991) Persistent infection of Vero cells by the flavivirus Murray Valley encephalitis virus. J. Gen. Virol. 72, 573-578.
29. Ravi, V., Desai, A. S., Shenoy, P. K., Satishchandra, P., Chandramuki, A., et al. (1993) Persistence of Japanese encephalitis virus in the human nervous system. J. Med. Virol. 40, 326-329.
30. Rice, C. M. (1996) Flaviviridae: the viruses and their replication; in Virology, Fields et al. (eds.), pp. 931-959, Lippincott-Raven Publishers, Philadelphia.
31. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
32. Schmaljohn, C. and Blair, C. D. (1977) Persistent infection of cultured mammalian cells by Japanese encephalitis virus. J. Virol. 24, 580-589.
33. Schmaljohn, C. and Blair, C. D. (1979) Clonal analysis of mammalian cell cultures persistently infected with by Japanese encephalitis virus. J. Virol. 31, 816-822.
34. Sharma, S., Mathur, A., Prakash, V., Kulshreshta, R., Kumar, R., et al. (1991) Japanese encephalitis latency in peripheral blood lymphocytes and recurrence of infection in children. Clin. Exp. Immunol. 85, 85-91.
35. Shi, P.-Y., Li, W., and Brinton, M. A. (1996) Cell proteins bind specifically to West Nile virus minus-strand 3′ stem-loop RNA. J. Virol. 70, 6278-6287.
36. Slavin, H. B. (1943) Persistence of the virus of St. Louis encephalitis in the central nervous system of mice for over five months. J. Bacteriol. 46, 113-116.
37. Specter, S. and Lancz, G. (1992) Clinical Virology Manual, 2nd ed., Elsevier Science Publishing Company, New York.
38. Sumiyoshi, H., Mori, C., Fuke, I., Morita, K., Kuhara, S., et al. (1987) Complete nucleotide sequence of the Japanese encephalitis virus genome RNA. Virology 161, 497-510.
39. Tesh, R. B., Siirin, M., Guzman, H., Travassos da Rosa, A. P., Wu, X., et al. (2005) Persistent West Nile virus infection in the golden hamster: studies on its mechanism and possible implications for other flavivirus infections. J. Infect. Dis. 192, 287-295.
40. Tonry, J. H., Xiao, S. Y., Siirin, M., Chen, H., da Rosa, A. P., et al. (2005) Persistent shedding of West Nile virus in urine of experimentally infected hamsters. Am. J. Trop. Med. Hyg. 72, 320-324.
41. Umenai, T., Krzysko, R., Betkimirov, T. A., and Assad, F. A. (1985) Japanese encephalitis: current world status. Bull. WHO 63, 625-630.
42. Urosevic, N., van Maanen, M., Mansfield, J. P., Mackenzie, J. S., and Shellam, G. S. (1977) Molecular characterization of virus-specific RNA produced in the brains of flavivirus-susceptible and -resistant mice with Murray Valley encephalitis virus. J. Gen. Virol. 78, 23-29.
43. Vlaycheva, L. A. and Chambers, T. J. (2002) Neuroblastoma cell-adapted yellow fever virus: characterization of a viral variant associated with persistent infection and decreased viral spread. J. Virol. 76, 6172-6184.
44. Vlaycheva, L., Nickells, M., Droll, D. A., and Chambers, T. J. (2005) Neuroblastoma cell-adapted yellow fever virus: mutagenesis of the E protein locus involved in persistent infection and its effects on virus penetration and spread. J. Gen. Virol. 86, 413-421.
45. Von Magnus (1951) Propagation of the PR8 strain of influenza virus in chick embryos. III. Properties of the incomplete virus produced in serial passages of undiluted virus. Acta Pathol. Microbiol. Scand. 29, 157-181.
46. Weiss, B., Leveis, R., and Schlesinger, S. (1983) Evolution of virus and defective-interfering RNAs in BHK cells persistently infected with Sindbis virus. J. Virol. 48, 676-684.
47. Westaway, E. G., Mackenzie, J. M., Kenney, M. T., Jones, M. K., and Khromykh, A. A. (1997) Ultrastructure of Kunjin virus-infected cells: colocalization of NS1 and NS3 with double-stranded RNA, and of NS2B with NS3, in virus-induced membrane structures. J. Virol. 71, 6650-6661.
48. White, C. L., Thomson, M., and Dimmock, N. J. (1998) Deletion analysis of a defective interfering Semliki Forest virus RNA genome defines a region in the nsP2 sequence that is required for efficient packaging of the genome into virus particles. J. Virol. 72, 4320-4326.