Sequence of the pearl oyster carbonic anhydrase-related protein and its evolutionary implications

Biochemical Genetics

Volumn 50, Issue 3-4, 2012, Pages 269-276

  Miyamoto, Hiroshi ^a  

^a KINKI UNIVERSITY   (Japan)

Author keywords

Carbonic anhydrase related protein; Mantle; Pearl oyster; Sequence

Indexed keywords

CARBONATE DEHYDRATASE; CARBONIC ANHYDRASE RELATED PROTEIN; CARBONIC ANHYDRASE RELATED PROTEIN VIII; CARBONIC ANHYDRASE RELATED PROTEIN VIII LIKE PROTEIN; COMPLEMENTARY DNA; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; DEUTEROSTOMIA; EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PINCTADA; PINCTADA FUCATA; PROTOSTOMIA; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BINDING SITES; CARBONIC ANHYDRASES; EVOLUTION, MOLECULAR; MOLECULAR SEQUENCE DATA; ORGAN SPECIFICITY; PHYLOGENY; PINCTADA; REAL-TIME POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION, GENETIC;

CYPRINIDAE; DEUTEROSTOMIA; INVERTEBRATA; MOLLUSCA; PINCTADA; PINCTADA FUCATA; PLACOZOA; PROTOSTOMIA; VERTEBRATA;

EID: 84862774491     PISSN: 00062928     EISSN: 15734927     Source Type: Journal    
DOI: 10.1007/s10528-011-9469-x     Document Type: Article

References (24)

1. Barnea G, Silvennoinen O, Shaanan B, Honegger AM, Canoll PD, D'Eustachio P, Morse B, Levy JB, Laforgia S, Huebner K, Musacchio JM, Sap J, Schlessinger J (1993) Identification of a carbonic anhydrase-like domain in the extracellular region of RPTP gamma defines a new subfamily of receptor tyrosine phosphatases. Mol Cell Biol 13:1497-1506 (Pubitemid 23068087)
2. Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martinez DE, Peng J, Wigge PA, Bertulat B, Guder C, Nakamura Y, Ozbek S, Watanabe H, Khalturin K, Hemmrich G, Franke A, Augustin R, Fraune S, Hayakawa E, Hayakawa S, Hirose M, Hwang JS, Ikeo K, Nishimiya-Fujisawa C, Ogura A, Takahashi T, Steinmetz PR, Zhang X, Aufschnaiter R, Eder MK, Gorny AK, Salvenmoser W, Heimberg AM, Wheeler BM, Peterson KJ, Bottger A, Tischler P, Wolf A, Gojobori T, Remington KA, Strausberg RL, Venter JC, Technau U, Hobmayer B, Bosch TC, Holstein TW, Fujisawa T, Bode HR, David CN, Rokhsar DS, Steele RE (2010) The dynamic genome of Hydra. Nature 464:592-596
3. Collins AG (1998) Evaluating multiple alternative hypotheses for the origin of Bilateria: an analysis of 18S rRNA molecular evidence. Proc Natl Acad Sci USA 95:15458-15463 (Pubitemid 29018720)
4. Elleby B, Sjoblom B, Tu C, Silverman DN, Lindskog S (2000) Enhancement of catalytic efficiency by the combination of site-specific mutations in a carbonic anhydrase-related protein. Eur J Biochem 267:5908-5915
5. Ender A, Schierwater B (2003) Placozoa are not derived cnidarians: evidence from molecular morphology. Mol Biol Evol 20:130-134 (Pubitemid 36077907)
6. Hewett-Emmett D (2000) Evolution and distribution of the carbonic anhydrase gene families. In: Chegwidden WR, Carter ND, Edwards YH (eds) The carbonic anhydrases: new horizons. Birkhauser, Basel, pp 29-76
7. Hirota J, Ando H, Hamada K, Mikoshiba K (2003) Carbonic anhydrase-related protein is a novel binding protein for inositol 1,4,5-trisphosphate receptor type 1. Biochem J 372:435-441 (Pubitemid 36723889)
8. Jiao Y, Yan J, Zhao Y, Donahue LR, Beamer WG, Li X, Roe BA, Ledoux MS, Gu W (2005) Carbonic anhydrase-related protein VIII deficiency is associated with a distinctive lifelong gait disorder in waddles mice. Genetics 171:1239-1246 (Pubitemid 43234855)
9. Kato K (1990) Sequence of a novel carbonic anhydrase-related polypeptide and its exclusive presence in Purkinje cells. FEBS Lett 271:137-140 (Pubitemid 20336223)
10. Kono M, Hayashi N, Samata T (2000) Molecular mechanism of the nacreous layer formation in Pinctada maxima. Biochem Biophys Res Commun 269:213-218 (Pubitemid 30440279)
11. Levy JB, Canoll PD, Silvennoinen O, Barnea G, Morse B, Honegger AM, Huang JT, Cannizzaro LA, Park SH, Druck T, Huebner K, Sap J, Ehrlich M, Musacchio JM, Schlessinger J (1993) The cloning of a receptor-type protein tyrosine phosphatase expressed in the central nervous system. J Biol Chem 268:10573-10581 (Pubitemid 23150247)
12. Lu SH, Takeuchi T, Fujita J, Ishida T, Akisawa Y, Nishimori I, Kohsaki T, Onishi S, Sonobe H, Ohtsuki Y (2004) Effect of carbonic anhydrase-related protein VIII expression on lung adenocarcinoma cell growth. Lung Cancer 44:273-280 (Pubitemid 38609434)
13. Miyaji E, Nishimori I, Taniuchi K, Takeuchi T, Ohtsuki Y, Onishi S (2003) Overexpression of carbonic anhydrase-related protein VIII in human colorectal cancer. J Pathol 201:37-45 (Pubitemid 37121201)
14. Miyamoto H, Miyashita T, Okushima M, Nakano S, Morita T, Matsushiro A (1996) A carbonic anhydrase from the nacreous layer in oyster pearls. Proc Natl Acad Sci USA 93:9657-9660
15. Miyamoto H, Yano M, Miyashita T (2003) Similarities in the structure of nacrein, the shell-matrix protein, in a bivalve and a gastropod. J Molluscan Stud 69:87-89 (Pubitemid 36380391)
16. Miyamoto H, Miyoshi F, Kohno J (2005) The carbonic anhydrase domain protein nacrein is expressed in the epithelial cells of the mantle and acts as a negative regulator in calcification in the mollusk Pinctada fucata. Zool Sci 22:311-315 (Pubitemid 40607696)
17. Putnam NH, Srivastava M, Hellsten U, Dirks B, Chapman J, Salamov A, Terry A, Shapiro H, Lindquist E, Kapitonov VV, Jurka J, Genikhovich G, Grigoriev IV, Lucas SM, Steele RE, Finnerty JR, Technau U, Martindale MQ, Rokhsar DS (2007) Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 317:86-94 (Pubitemid 47056460)
18. Sjoblom B, Elleby B, Wallgren K, Jonsson BH, Lindskog S (1996) Two point mutations convert a catalytically inactive carbonic anhydrase-related protein (CARP) to an active enzyme. FEBS Lett 398:322-325 (Pubitemid 26414334)
19. Skaggs LA, Bergenhem NC, Venta PJ, Tashian RE (1993) The deduced amino acid sequence of human carbonic anhydrase-related protein (CARP) is 98% identical to the mouse homologue. Gene 126:291-292
20. Supuran CT (2008) Carbonic anhydrases, an overview. Curr Pharm Des 14:603-614
21. Taniuchi K, Nishimori I, Takeuchi T, Fujikawa-Adachi K, Ohtsuki Y, Onishi S (2002a) Developmental expression of carbonic anhydrase-related proteins VIII, X, and XI in the human brain. Neuroscience 112:93-99 (Pubitemid 34603500)
22. Taniuchi K, Nishimori I, Takeuchi T, Ohtsuki Y, Onishi S (2002b) cDNA cloning and developmental expression of murine carbonic anhydrase-related proteins VIII, X, and XI. Brain Res Mol Brain Res 109:207-215 (Pubitemid 36078386)
23. Tashian RE (1989) The carbonic anhydrases: widening perspectives on their evolution, expression and function. BioEssays 10:186-192
24. Yan J, Jiao Y, Jiao F, Stuart J, Donahue LR, Beamer WG, Li X, Roe BA, LeDoux MS, Gu W (2007) Effects of carbonic anhydrase VIII deficiency on cerebellar gene expression profiles in the wdl mouse. Neurosci Lett 413:196-201 (Pubitemid 46209510)