Pyrosequence read length of 16S rRNA gene affects phylogenetic assignment of plant-associated bacteria

Microbes and Environments

Volumn 27, Issue 2, 2012, Pages 204-208

  Okubo, Takashi ^a   Ikeda, Seishi ^a,b   Yamashita, Akifumi ^a   Terasawa, Kimihiro ^a   Minamisawa, Kiwamu ^a  

^a TOHOKU UNIVERSITY   (Japan)

^b NATIONAL AGRICULTURAL RESEARCH CENTER FOR HOKKAIDO REGION   (Japan)

Author keywords

16S rRNA gene; Bacterial community; Phylogenetic analysis; Plant associated bacteria

Indexed keywords

BACTERIAL DNA; RIBOSOME DNA; RNA 16S;

ARTICLE; BACTERIUM; BIODIVERSITY; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; EVALUATION; GENETICS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; PHYLOGENY; PLANT;

BACTERIA; BIODIVERSITY; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; PHYLOGENY; PLANTS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84862658892     PISSN: 13426311     EISSN: 13474405     Source Type: Journal    
DOI: 10.1264/jsme2.ME11258     Document Type: Article

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