Changes in population occupancy of bradyrhizobia under different temperature regimes

Microbes and Environments

Volumn 25, Issue 4, 2010, Pages 309-312

  Saeki, Yuichi ^a   Ozumi, Satoru ^a   Yamamoto, Akihiro ^a   Umehara, Yosuke ^b   Hayashi, Masaki ^b   Sigua, Gilbert C ^c  

^a UNIVERSITY OF MIYAZAKI   (Japan)

^b NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^c USDA ARS SubTropical Agricultural Research Station   (United States)

Author keywords

Bradyrhizobium; Community; Environmental gradients; Population occupancy; Soil temperature

Indexed keywords

ARTICLE; BIODIVERSITY; BRADYRHIZOBIUM; CHEMISTRY; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MICROBIOLOGY; SOIL; TEMPERATURE;

BIODIVERSITY; BRADYRHIZOBIUM; SOIL; SOIL MICROBIOLOGY; TEMPERATURE;

BRADYRHIZOBIACEAE; BRADYRHIZOBIUM; BRADYRHIZOBIUM ELKANII; BRADYRHIZOBIUM JAPONICUM;

EID: 78650070081     PISSN: 13426311     EISSN: 13426311     Source Type: Journal    
DOI: 10.1264/jsme2.ME10128     Document Type: Article

References (18)

1. Ando, S., and T. Yokoyama. 1999. Phylogenetic analyses of Bradyrhizobium strains nodulating soybean (Glycine max) in Thailand with reference to the USDA strains of Bradyrhizobium. Can. J. Microbiol. 45:639-645.
2. Cullen, W.D., and P.R. Hirsch. 1998. Simple and rapid method for direct extraction of microbial DNA from soil for PCR. Soil Biol. Biochem. 30:983-993.
3. Iwata, Y., and T. Hirota. 2005. Monitoring over-winter soil water dynamics in a freezing and snow-covered environment using a thermally insulated tensiometer. Hydrol. Process. 19:3013-3019.
4. Kim, J-S., M. Sakai, A. Hosoda, and T. Matsuguchi. 1999. Application of DGGE analysis to the study of bacterial community structure in plant roots and in nonrhizosphere soil. Soil Sci. Plant Nutr. 45:493-497.
5. Kluson, A.R., W.J. Kenworthy, and D.F. Weber. 1986. Soil temperature effects on competitiveness and growth of Rhizobium japonicum and on Rhizobium-induced chlorosis of soybean. Plant Soil. 95:201-207.
6. Kündig, C., C. Beck, H. Hennecke, and M. Göttfert. 1995. A single rRNA gene region in Bradyrhizobium japonicum. J. Bacteriol. 177:5151-5154.
7. Kuykendall, L.D., and G.H. Elkan. 1976. Rhizobium japonicum derivatives differing in nitrogen-fixing efficiency and carbohydrate utilization. Appl. Environ. Microbiol. 32:511-519.
8. Minami, M., T. Yamakawa, A. Yamamoto, S. Akao, and Y. Saeki. 2009. Estimation of nodulation tendency among Rj-genotype soybeans using the bradyrhizobial community isolated from an Andosol. Soil Sci. Plant Nutr. 55:65-72.
9. Munévar, F., and A.G. Wollum, II. 1981: Growth of Rhizobium japonicum strains at temperatures above 27°C. Appl. Environ. Microbiol. 42:272-276.
10. Ono, Y., and T. Nakanishi. 1983. Seasonal changes in growth and yield of sugarcane plants in southwestern islands of Japan. 1. Progress of leaf-emergence on main stem. Japan. J. Crop Sci. 52:500-507 (In Japanese).
11. Porteous, L.A., R.J. Seidler, and L.S. Watrud. 1997. An improved method for purifying DNA from soil for polymerase chain reaction amplification and molecular ecology applications. Mol. Ecol. 6:787-791.
12. Saeki, Y., N. Aimi, M. Hashimoto, S. Tsukamoto, A. Kaneko, N. Yoshida, Y. Nagatomo, and S. Akao. 2004. Grouping of Bradyrhizobium USDA strains by sequence analysis of 16S rDNA and 16S-23S rDNA internal transcribed spacer region. Soil Sci. Plant Nutr. 50:517-525.
13. Saeki, Y., N. Aimi, S. Tsukamoto, T. Yamakawa, Y. Nagatomo, and S. Akao. 2006. Diversity and geographical distribution of indigenous soybean-nodulating bradyrhizobia in Japan. Soil Sci. Plant Nutr. 52:418-426.
14. Saeki, Y., M. Minami, A. Yamamoto, and S. Akao. 2008. Estimation of the bacterial community diversity of soybean-nodulating bradyrhizobia isolated from Rj-genotype soybeans. Soil Sci. Plant Nutr. 54:718-724.
15. Suzuki, K., H. Oguro, T. Yamakawa, A. Yamamoto, S. Akao, and Y. Saeki. 2008. Diversity and distribution of indigenous soybeannodulating rhizobia in the Okinawa islands, Japan. Soil Sci. Plant Nutr. 54:237-246.
16. Sameshima, R., T. Isawa, M.J. Sadowsky, T. Hamada, H. Kasai, A. Shutsrirung, H. Mitsui, and K. Minamisawa. 2003. Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSα, RSβ and IS1631. FEMS Microbiol. Ecol. 44:191-202.
17. Vincent, J.M. 1970. A manual for the practical study of the rootnodule bacteria, International Biological Program, p. 1-13. In IBP Handbook No. 15. Blackwell Scientific Publ., Oxford.
18. Yokoyama, T., S. Ando, T. Murakami, and H. Imai. 1996. Genetic variability of the common nod gene in soybean bradyrhizobia isolated in Thailand and Japan. Can. J. Microbiol. 42:1209-1218.