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Volumn 42, Issue 8, 2012, Pages 525-536

Transcriptome and full-length cDNA resources for the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major insect pest of pine forests

Author keywords

Curculionidae; Cytochrome P450 monooxygenase; Dendroctonus; Plant insect pathogen interactions; Scolytinae; Transcriptome

Indexed keywords

CYTOCHROME P450; TRANSCRIPTOME;

EID: 84862629280     PISSN: 09651748     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibmb.2012.03.010     Document Type: Article
Times cited : (91)

References (48)
  • 2
    • 79955911730 scopus 로고    scopus 로고
    • Genome-wide analysis of cytochrome P450 monooxygenase genes in the silkworm, Bombyx mori
    • Ai J., Zhu Y., Duan J., Yu Q., Zhang G., Wan F., Xiang Z.H. Genome-wide analysis of cytochrome P450 monooxygenase genes in the silkworm, Bombyx mori. Gene 2011, 480:42-50.
    • (2011) Gene , vol.480 , pp. 42-50
    • Ai, J.1    Zhu, Y.2    Duan, J.3    Yu, Q.4    Zhang, G.5    Wan, F.6    Xiang, Z.H.7
  • 3
    • 79958817866 scopus 로고    scopus 로고
    • Gene genealogies reveal cryptic species and host preferences for the pine fungal pathogen Grosmannia clavigera
    • Alamouti S.M., Wang V., Diguistini S., Six D.L., Bohlmann J., Hamelin R.C., Feau N., Breuil C. Gene genealogies reveal cryptic species and host preferences for the pine fungal pathogen Grosmannia clavigera. Mol. Ecol. 2011, 20:2581-2602.
    • (2011) Mol. Ecol. , vol.20 , pp. 2581-2602
    • Alamouti, S.M.1    Wang, V.2    Diguistini, S.3    Six, D.L.4    Bohlmann, J.5    Hamelin, R.C.6    Feau, N.7    Breuil, C.8
  • 5
    • 0001274781 scopus 로고
    • Population changes of the mountain pine beetle in relation to elevation
    • Amman G.D. Population changes of the mountain pine beetle in relation to elevation. Environ. Entomol. 1973, 2:541-547.
    • (1973) Environ. Entomol. , vol.2 , pp. 541-547
    • Amman, G.D.1
  • 7
    • 0041707794 scopus 로고    scopus 로고
    • Frontalin: De novo biosynthesis of an aggregation pheromone component by Dendroctonus spp. bark beetles (Coleoptera: Scolytidae)
    • Barkawi L.S., Francke W., Blomquist G.J., Seybold S.J. Frontalin: De novo biosynthesis of an aggregation pheromone component by Dendroctonus spp. bark beetles (Coleoptera: Scolytidae). Insect Biochem. Mol. Biol. 2003, 33:773-788.
    • (2003) Insect Biochem. Mol. Biol. , vol.33 , pp. 773-788
    • Barkawi, L.S.1    Francke, W.2    Blomquist, G.J.3    Seybold, S.J.4
  • 8
    • 12744262788 scopus 로고    scopus 로고
    • The mevalonate pathway and the synthesis of juvenile hormone in insects
    • Bellés X., Martín D., Piulachs M.D. The mevalonate pathway and the synthesis of juvenile hormone in insects. Annu. Rev. Entomol. 2005, 50:181-199.
    • (2005) Annu. Rev. Entomol. , vol.50 , pp. 181-199
    • Bellés, X.1    Martín, D.2    Piulachs, M.D.3
  • 10
    • 78650210587 scopus 로고    scopus 로고
    • The ecological interaction of the mountain pine beetle and jack pine budworm in the boreal forest
    • Colgan L.J., Erbilgin N. The ecological interaction of the mountain pine beetle and jack pine budworm in the boreal forest. For. Chron. 2010, 86:766-774.
    • (2010) For. Chron. , vol.86 , pp. 766-774
    • Colgan, L.J.1    Erbilgin, N.2
  • 13
    • 33846267305 scopus 로고    scopus 로고
    • Generation and annotation of lodgepole pine and oleoresin-induced expressed sequences from the blue-stain fungus Ophiostoma clavigerum, a Mountain Pine Beetle-associated pathogen
    • DiGuistini S., Ralph S.G., Lim Y.W., Holt R., Jones S., Bohlmann J., Breuil C. Generation and annotation of lodgepole pine and oleoresin-induced expressed sequences from the blue-stain fungus Ophiostoma clavigerum, a Mountain Pine Beetle-associated pathogen. FEMS Microbiol. Lett. 2007, 267:151-158.
    • (2007) FEMS Microbiol. Lett. , vol.267 , pp. 151-158
    • DiGuistini, S.1    Ralph, S.G.2    Lim, Y.W.3    Holt, R.4    Jones, S.5    Bohlmann, J.6    Breuil, C.7
  • 15
    • 0141922184 scopus 로고    scopus 로고
    • Comparison of gene representation in midguts from two phytophagous insects, Bombyx mori and Ips pini, using expressed sequence tags
    • Eigenheer A.L., Keeling C.I., Young S., Tittiger C. Comparison of gene representation in midguts from two phytophagous insects, Bombyx mori and Ips pini, using expressed sequence tags. Gene 2003, 316:127-136.
    • (2003) Gene , vol.316 , pp. 127-136
    • Eigenheer, A.L.1    Keeling, C.I.2    Young, S.3    Tittiger, C.4
  • 16
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing B., Green P. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 1998, 8:186-194.
    • (1998) Genome Res. , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 17
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B., Hillier L., Wendl M.C., Green P. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 1998, 8:175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 18
    • 34248657991 scopus 로고    scopus 로고
    • Evolution of insect P450
    • Feyereisen R. Evolution of insect P450. Biochem. Soc. Trans. 2006, 34:1252-1255.
    • (2006) Biochem. Soc. Trans. , vol.34 , pp. 1252-1255
    • Feyereisen, R.1
  • 19
    • 78649445838 scopus 로고    scopus 로고
    • Arthropod CYPomes illustrate the tempo and mode in P450 evolution
    • Feyereisen R. Arthropod CYPomes illustrate the tempo and mode in P450 evolution. Biochim. Biophys. Acta 2011, 1814:19-28.
    • (2011) Biochim. Biophys. Acta , vol.1814 , pp. 19-28
    • Feyereisen, R.1
  • 20
    • 25144459052 scopus 로고    scopus 로고
    • Anatomical and chemical defenses of conifer bark against bark beetles and other pests
    • Franceschi V.R., Krokene P., Christiansen E., Krekling T. Anatomical and chemical defenses of conifer bark against bark beetles and other pests. New Phytol. 2005, 167:353-376.
    • (2005) New Phytol. , vol.167 , pp. 353-376
    • Franceschi, V.R.1    Krokene, P.2    Christiansen, E.3    Krekling, T.4
  • 24
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: a DNA sequence assembly program
    • Huang X., Madan A. CAP3: a DNA sequence assembly program. Genome Res. 1999, 9:868-877.
    • (1999) Genome Res. , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 25
    • 58549095295 scopus 로고    scopus 로고
    • Successful colonization, reproduction, and new generation emergence in live interior hybrid spruce Picea engelmannii x glauca by mountain pine beetle Dendroctonus ponderosae
    • Huber D.P.W., Aukema B.H., Hodgkinson R.S., Lindgren B.S. Successful colonization, reproduction, and new generation emergence in live interior hybrid spruce Picea engelmannii x glauca by mountain pine beetle Dendroctonus ponderosae. Agric. For. Entomol. 2009, 11:83-89.
    • (2009) Agric. For. Entomol. , vol.11 , pp. 83-89
    • Huber, D.P.W.1    Aukema, B.H.2    Hodgkinson, R.S.3    Lindgren, B.S.4
  • 26
    • 33645461383 scopus 로고    scopus 로고
    • Effects of juvenile hormone on gene expression in the pheromone-producing midgut of the pine engraver beetle, Ips pini
    • Keeling C.I., Bearfield J.C., Young S., Blomquist G.J., Tittiger C. Effects of juvenile hormone on gene expression in the pheromone-producing midgut of the pine engraver beetle, Ips pini. Insect Mol. Biol. 2006, 15:207-216.
    • (2006) Insect Mol. Biol. , vol.15 , pp. 207-216
    • Keeling, C.I.1    Bearfield, J.C.2    Young, S.3    Blomquist, G.J.4    Tittiger, C.5
  • 27
    • 4043118931 scopus 로고    scopus 로고
    • Coordinated gene expression for pheromone biosynthesis in the pine engraver beetle, Ips pini (Coleoptera: Scolytidae)
    • Keeling C.I., Blomquist G.J., Tittiger C. Coordinated gene expression for pheromone biosynthesis in the pine engraver beetle, Ips pini (Coleoptera: Scolytidae). Naturwissenschaften 2004, 91:324-328.
    • (2004) Naturwissenschaften , vol.91 , pp. 324-328
    • Keeling, C.I.1    Blomquist, G.J.2    Tittiger, C.3
  • 28
    • 33750182554 scopus 로고    scopus 로고
    • Diterpene resin acids in conifers
    • Keeling C.I., Bohlmann J. Diterpene resin acids in conifers. Phytochemistry 2006, 67:2415-2423.
    • (2006) Phytochemistry , vol.67 , pp. 2415-2423
    • Keeling, C.I.1    Bohlmann, J.2
  • 29
    • 33646674456 scopus 로고    scopus 로고
    • Genes, enzymes and chemicals of terpenoid diversity in the constitutive and induced defence of conifers against insects and pathogens
    • Keeling C.I., Bohlmann J. Genes, enzymes and chemicals of terpenoid diversity in the constitutive and induced defence of conifers against insects and pathogens. New Phytol. 2006, 170:657-675.
    • (2006) New Phytol. , vol.170 , pp. 657-675
    • Keeling, C.I.1    Bohlmann, J.2
  • 30
    • 77957926979 scopus 로고    scopus 로고
    • Comparing de novo assemblers for 454 transcriptome data
    • Kumar S., Blaxter M.L. Comparing de novo assemblers for 454 transcriptome data. BMC Genomics 2010, 11:571.
    • (2010) BMC Genomics , vol.11 , pp. 571
    • Kumar, S.1    Blaxter, M.L.2
  • 32
    • 40349089634 scopus 로고    scopus 로고
    • Risk of natural disturbances makes future contribution of Canada's forests to the global carbon cycle highly uncertain
    • Kurz W.A., Stinson G., Rampley G.J., Dymond C.C., Neilson E.T. Risk of natural disturbances makes future contribution of Canada's forests to the global carbon cycle highly uncertain. Proc. Natl. Acad. Sci. USA 2008, 105:1551-1555.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 1551-1555
    • Kurz, W.A.1    Stinson, G.2    Rampley, G.J.3    Dymond, C.C.4    Neilson, E.T.5
  • 33
    • 33750117816 scopus 로고    scopus 로고
    • Diversity of fungi associated with the mountain pine beetle Dendroctonus ponderosae and infested lodgepole pines in British Columbia
    • Lee S., Kim J.-J., Breuil C. Diversity of fungi associated with the mountain pine beetle Dendroctonus ponderosae and infested lodgepole pines in British Columbia. Fungal Divers. 2006, 22:91-105.
    • (2006) Fungal Divers. , vol.22 , pp. 91-105
    • Lee, S.1    Kim, J.-J.2    Breuil, C.3
  • 35
    • 78149463754 scopus 로고    scopus 로고
    • Tissue-specific transcriptomics of the exotic invasive insect pest emerald ash borer (Agrilus planipennis)
    • Mittapalli O., Bai X., Mamidala P., Rajarapu S.P., Bonello P., Herms D.A. Tissue-specific transcriptomics of the exotic invasive insect pest emerald ash borer (Agrilus planipennis). PloS ONE 2010, 5:e13708.
    • (2010) PloS ONE , vol.5
    • Mittapalli, O.1    Bai, X.2    Mamidala, P.3    Rajarapu, S.P.4    Bonello, P.5    Herms, D.A.6
  • 36
    • 77951894310 scopus 로고    scopus 로고
    • Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery
    • Parchman T.L., Geist K.S., Grahnen J.A., Benkman C.W., Buerkle C.A. Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery. BMC Genomics 2010, 11:180.
    • (2010) BMC Genomics , vol.11 , pp. 180
    • Parchman, T.L.1    Geist, K.S.2    Grahnen, J.A.3    Benkman, C.W.4    Buerkle, C.A.5
  • 37
    • 34249848751 scopus 로고    scopus 로고
    • CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
    • Parra G., Bradnam K., Korf I. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 2007, 23:1061-1067.
    • (2007) Bioinformatics , vol.23 , pp. 1061-1067
    • Parra, G.1    Bradnam, K.2    Korf, I.3
  • 38
    • 78650761333 scopus 로고    scopus 로고
    • Diversity of beetle genes encoding novel plant cell wall degrading enzymes
    • Pauchet Y., Wilkinson P., Chauhan R., Ffrench-Constant R.H. Diversity of beetle genes encoding novel plant cell wall degrading enzymes. PLoS ONE 2010, 5:e15635.
    • (2010) PLoS ONE , vol.5
    • Pauchet, Y.1    Wilkinson, P.2    Chauhan, R.3    Ffrench-Constant, R.H.4
  • 42
    • 33746352113 scopus 로고    scopus 로고
    • The biology and epidemiology of the mountain pine beetle in lodgepole pine forests
    • Natural Resources Canada, Canadian Forest Service, Victoria, BC, Canada, L. Safranyik, B. Wilson (Eds.)
    • Safranyik L., Carroll A.L. The biology and epidemiology of the mountain pine beetle in lodgepole pine forests. The Mountain Pine Beetle-A Synthesis of Biology, Management, and Impacts on Lodgepole Pine 2006, 3-66. Natural Resources Canada, Canadian Forest Service, Victoria, BC, Canada. L. Safranyik, B. Wilson (Eds.).
    • (2006) The Mountain Pine Beetle-A Synthesis of Biology, Management, and Impacts on Lodgepole Pine , pp. 3-66
    • Safranyik, L.1    Carroll, A.L.2
  • 44
    • 79960451064 scopus 로고    scopus 로고
    • Climate variability and spruce beetle (Dendroctonus rufipennis) outbreaks in south-central and southwest Alaska
    • Sherriff R.L., Berg E.E., Miller A.E. Climate variability and spruce beetle (Dendroctonus rufipennis) outbreaks in south-central and southwest Alaska. Ecology 2011, 92:1459-1470.
    • (2011) Ecology , vol.92 , pp. 1459-1470
    • Sherriff, R.L.1    Berg, E.E.2    Miller, A.E.3
  • 46
    • 78650879897 scopus 로고    scopus 로고
    • The role of phytopathogenicity in bark beetle-fungus symbioses: a challenge to the classic paradigm
    • Six D.L., Wingfield M.J. The role of phytopathogenicity in bark beetle-fungus symbioses: a challenge to the classic paradigm. Annu. Rev. Entomol. 2011, 56:255-272.
    • (2011) Annu. Rev. Entomol. , vol.56 , pp. 255-272
    • Six, D.L.1    Wingfield, M.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.