-
1
-
-
53249121024
-
Long range chromatin interactions involved in gene regulation
-
Long range chromatin interactions involved in gene regulation. Bartkuhn M, Renkawitz R, Biochimica et biophysica acta 2008 1783 2161 2166
-
(2008)
Biochimica et Biophysica Acta
, vol.1783
, pp. 2161-2166
-
-
Bartkuhn, M.1
Renkawitz, R.2
-
2
-
-
79959699992
-
CTCF-mediated functional chromatin interactome in pluripotent cells
-
CTCF-mediated functional chromatin interactome in pluripotent cells. Handoko L, Xu H, Li G, Ngan CY, Chew E, Schnapp M, Lee CW, Ye C, Ping JL, Mulawadi F, et al. Nature Genetics 2011 43 630 638
-
(2011)
Nature Genetics
, vol.43
, pp. 630-638
-
-
Handoko, L.1
Xu, H.2
Li, G.3
Ngan, C.Y.4
Chew, E.5
Schnapp, M.6
Lee, C.W.7
Ye, C.8
Ping, J.L.9
Mulawadi, F.10
-
3
-
-
67549119096
-
CTCF: Master weaver of the genome
-
CTCF: master weaver of the genome. Phillips JE, Corces VG, Cell 2009 137 1194 1211
-
(2009)
Cell
, vol.137
, pp. 1194-1211
-
-
Phillips, J.E.1
Corces, V.G.2
-
4
-
-
55549092726
-
CTCF regulates cell cycle progression of alphabeta T cells in the thymus
-
CTCF regulates cell cycle progression of alphabeta T cells in the thymus. Heath H, Ribeiro De Almeida C, Sleutels F, Dingjan G, Van De Nobelen S, Jonkers I, Ling KW, Gribnau J, Renkawitz R, Grosveld F, et al. Embo J 2008 27 2839 2850
-
(2008)
Embo J
, vol.27
, pp. 2839-2850
-
-
Heath, H.1
Ribeiro De Almeida, C.2
Sleutels, F.3
Dingjan, G.4
Van De Nobelen, S.5
Jonkers, I.6
Ling, K.W.7
Gribnau, J.8
Renkawitz, R.9
Grosveld, F.10
-
5
-
-
60549091427
-
Critical role for the transcription regulator CCCTC-binding factor in the control of Th2 cytokine expression
-
Critical role for the transcription regulator CCCTC-binding factor in the control of Th2 cytokine expression. Ribeiro De Almeida C, Heath H, Krpic S, Dingjan GM, Van Hamburg JP, Bergen I, Van De Nobelen S, Sleutels F, Grosveld F, Galjart N, Hendriks RW, J Immunol 2009 182 999 1010
-
(2009)
J Immunol
, vol.182
, pp. 999-1010
-
-
Ribeiro De Almeida, C.1
Heath, H.2
Krpic, S.3
Dingjan, G.M.4
Van Hamburg, J.P.5
Bergen, I.6
Van De Nobelen, S.7
Sleutels, F.8
Grosveld, F.9
Galjart, N.10
Hendriks, R.W.11
-
6
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
DOI 10.1016/j.cell.2007.05.009, PII S0092867407006009
-
High-resolution profiling of histone methylations in the human genome. Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K, Cell 2007 129 823 837 (Pubitemid 46802390)
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.-Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
7
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
DOI 10.1016/j.cell.2008.04.043, PII S009286740800617X
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Chen X, Xu H, Yuan P, Fang F, Huss M, Vega VB, Wong E, Orlov YL, Zhang W, Jiang J, et al. Cell 2008 133 1106 1117 (Pubitemid 351787745)
-
(2008)
Cell
, vol.133
, Issue.6
, pp. 1106-1117
-
-
Chen, X.1
Xu, H.2
Yuan, P.3
Fang, F.4
Huss, M.5
Vega, V.B.6
Wong, E.7
Orlov, Y.L.8
Zhang, W.9
Jiang, J.10
Loh, Y.-H.11
Yeo, H.C.12
Yeo, Z.X.13
Narang, V.14
Govindarajan, K.R.15
Leong, B.16
Shahab, A.17
Ruan, Y.18
Bourque, G.19
Sung, W.-K.20
Clarke, N.D.21
Wei, C.-L.22
Ng, H.-H.23
more..
-
8
-
-
77957139539
-
Mediator and cohesin connect gene expression and chromatin architecture
-
Mediator and cohesin connect gene expression and chromatin architecture. Kagey MH, Newman JJ, Bilodeau S, Zhan Y, Orlando DA, van Berkum NL, Ebmeier CC, Goossens J, Rahl PB, Levine SS, et al. Nature 2010 467 430 435
-
(2010)
Nature
, vol.467
, pp. 430-435
-
-
Kagey, M.H.1
Newman, J.J.2
Bilodeau, S.3
Zhan, Y.4
Orlando, D.A.5
Van Berkum, N.L.6
Ebmeier, C.C.7
Goossens, J.8
Rahl, P.B.9
Levine, S.S.10
-
9
-
-
33947201809
-
Analysis of the vertebrate insulator protein CTCF- binding sites in the human genome
-
DOI 10.1016/j.cell.2006.12.048, PII S009286740700205X
-
Analysis of the vertebrate insulator protein CTCF- binding sites in the human genome. Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD, Zhang MQ, Lobanenkov VV, Ren B, Cell 2007 128 1231 1245 (Pubitemid 46427876)
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1231-1245
-
-
Kim, T.H.1
Abdullaev, Z.K.2
Smith, A.D.3
Ching, K.A.4
Loukinov, D.I.5
Green, RolandD.6
Zhang, M.Q.7
Lobanenkov, V.V.8
Ren, B.9
-
10
-
-
79955929062
-
RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity
-
RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity. Nitzsche A, Paszkowski-Rogacz M, Matarese F, Janssen-Megens EM, Hubner NC, Schulz H, de Vries I, Ding L, Huebner N, Mann M, et al. PloS one 2011 6 19470
-
(2011)
PloS One
, vol.6
, pp. 519470
-
-
Nitzsche, A.1
Paszkowski-Rogacz, M.2
Matarese, F.3
Janssen-Megens, E.M.4
Hubner, N.C.5
Schulz, H.6
De Vries, I.7
Ding, L.8
Huebner, N.9
Mann, M.10
-
11
-
-
60149095014
-
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains
-
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains. Cuddapah S, Jothi R, Schones DE, Roh TY, Cui K, Zhao K, Genome research 2009 19 24 32
-
(2009)
Genome Research
, vol.19
, pp. 24-32
-
-
Cuddapah, S.1
Jothi, R.2
Schones, D.E.3
Roh, T.Y.4
Cui, K.5
Zhao, K.6
-
12
-
-
48249153426
-
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome
-
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome. Fu Y, Sinha M, Peterson CL, Weng Z, PLoS genetics 2008 4 1000138
-
(2008)
PLoS Genetics
, vol.4
, pp. 51000138
-
-
Fu, Y.1
Sinha, M.2
Peterson, C.L.3
Weng, Z.4
-
13
-
-
79959557189
-
Determinants of nucleosome organization in primary human cells
-
Determinants of nucleosome organization in primary human cells. Valouev A, Johnson SM, Boyd SD, Smith CL, Fire AZ, Sidow A, Nature 2011 474 516 520
-
(2011)
Nature
, vol.474
, pp. 516-520
-
-
Valouev, A.1
Johnson, S.M.2
Boyd, S.D.3
Smith, C.L.4
Fire, A.Z.5
Sidow, A.6
-
14
-
-
78049456151
-
CTCF regulates the local epigenetic state of ribosomal DNA repeats
-
CTCF regulates the local epigenetic state of ribosomal DNA repeats. van de Nobelen S, Rosa-Garrido M, Leers J, Heath H, Soochit W, Joosen L, Jonkers I, Demmers J, van der Reijden M, Torrano V, et al. Epigenetics & chromatin 2010 3 19
-
(2010)
Epigenetics & Chromatin
, vol.3
, pp. 19
-
-
Van De Nobelen, S.1
Rosa-Garrido, M.2
Leers, J.3
Heath, H.4
Soochit, W.5
Joosen, L.6
Jonkers, I.7
Demmers, J.8
Van Der Reijden, M.9
Torrano, V.10
-
15
-
-
73649145481
-
Cohesin is required for higher-order chromatin conformation at the imprinted Igf2-H19 locus
-
Cohesin is required for higher-order chromatin conformation at the imprinted Igf2-H19 locus. Nativio R, Wendt KS, Ito Y, Huddleston JE, Uribe-Lewis S, Woodfine K, Krueger C, Reik W, Peters JM, Murrell A, PLoS Genet 2009 5 1000739
-
(2009)
PLoS Genet
, vol.5
, pp. 51000739
-
-
Nativio, R.1
Wendt, K.S.2
Ito, Y.3
Huddleston, J.E.4
Uribe-Lewis, S.5
Woodfine, K.6
Krueger, C.7
Reik, W.8
Peters, J.M.9
Murrell, A.10
-
16
-
-
38849121606
-
Cohesins functionally associate with CTCF on mammalian chromosome arms
-
Cohesins functionally associate with CTCF on mammalian chromosome arms. Parelho V, Hadjur S, Spivakov M, Leleu M, Sauer S, Gregson HC, Jarmuz A, Canzonetta C, Webster Z, Nesterova T, et al. Cell 2008 132 422 433
-
(2008)
Cell
, vol.132
, pp. 422-433
-
-
Parelho, V.1
Hadjur, S.2
Spivakov, M.3
Leleu, M.4
Sauer, S.5
Gregson, H.C.6
Jarmuz, A.7
Canzonetta, C.8
Webster, Z.9
Nesterova, T.10
-
17
-
-
39149121436
-
Cohesin mediates transcriptional insulation by CCCTC-binding factor
-
DOI 10.1038/nature06634, PII NATURE06634
-
Cohesin mediates transcriptional insulation by CCCTC-binding factor. Wendt KS, Yoshida K, Itoh T, Bando M, Koch B, Schirghuber E, Tsutsumi S, Nagae G, Ishihara K, Mishiro T, et al. Nature 2008 451 796 801 (Pubitemid 351253176)
-
(2008)
Nature
, vol.451
, Issue.7180
, pp. 796-801
-
-
Wendt, K.S.1
Yoshida, K.2
Itoh, T.3
Bando, M.4
Koch, B.5
Schirghuber, E.6
Tsutsumi, S.7
Nagae, G.8
Ishihara, K.9
Mishiro, T.10
Yahata, K.11
Imamoto, F.12
Aburatani, H.13
Nakao, M.14
Imamoto, N.15
Maeshima, K.16
Shirahige, K.17
Peters, J.-M.18
-
18
-
-
33746063711
-
CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2
-
DOI 10.1073/pnas.0600326103
-
CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2. Kurukuti S, Tiwari VK, Tavoosidana G, Pugacheva E, Murrell A, Zhao Z, Lobanenkov V, Reik W, Ohlsson R, Proc Natl Acad Sci U S A 2006 103 10684 10689 (Pubitemid 44078037)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.28
, pp. 10684-10689
-
-
Kurukuti, S.1
Tiwari, V.K.2
Tavoosidana, G.3
Pugacheva, E.4
Murrell, A.5
Zhao, Z.6
Lobanenkov, V.7
Reik, W.8
Ohlsson, R.9
-
19
-
-
0037076432
-
BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma
-
DOI 10.1073/pnas.092123699
-
BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma. Loukinov DI, Pugacheva E, Vatolin S, Pack SD, Moon H, Chernukhin I, Mannan P, Larsson E, Kanduri C, Vostrov AA, et al. Proc Natl Acad Sci U S A 2002 99 6806 6811 (Pubitemid 34526213)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.10
, pp. 6806-6811
-
-
Loukinov, D.I.1
Pugacheva, E.2
Vatolin, S.3
Pack, S.D.4
Moon, H.5
Chernukhin, I.6
Mannan, P.7
Larsson, E.8
Kanduri, C.9
Vostrov, A.A.10
Cui, H.11
Niemitz, E.L.12
Rasko, J.E.J.13
Docquier, F.M.14
Kistler, M.15
Breen, J.J.16
Zhuang, Z.17
Quitschke, W.W.18
Renkawitz, R.19
Klenova, E.M.20
Feinberg, A.P.21
Ohlsson, R.22
Morse III, H.C.23
Lobanenkov, V.V.24
more..
-
20
-
-
50849144352
-
The evolution of epigenetic regulators CTCF and BORIS/CTCFL in amniotes
-
The evolution of epigenetic regulators CTCF and BORIS/CTCFL in amniotes. Hore TA, Deakin JE, Marshall Graves JA, PLoS Genet 2008 4 1000169
-
(2008)
PLoS Genet
, vol.4
, pp. 51000169
-
-
Hore, T.A.1
Deakin, J.E.2
Marshall Graves, J.A.3
-
21
-
-
33750705616
-
The potential of BORIS detected in the leukocytes of breast cancer patients as an early marker of tumorigenesis
-
DOI 10.1158/1078-0432.CCR-05-2731
-
The potential of BORIS detected in the leukocytes of breast cancer patients as an early marker of tumorigenesis. D'Arcy V, Abdullaev ZK, Pore N, Docquier F, Torrano V, Chernukhin I, Smart M, Farrar D, Metodiev M, Fernandez N, et al. Clin Cancer Res 2006 12 5978 5986 (Pubitemid 44703757)
-
(2006)
Clinical Cancer Research
, vol.12
, Issue.20 PART 1
, pp. 5978-5986
-
-
D'Arcy, V.1
Abdullaev, Z.K.2
Pore, N.3
Docquier, F.4
Torrano, V.5
Chernukhin, I.6
Smart, M.7
Farrar, D.8
Metodiev, M.9
Fernandez, N.10
Richard, C.11
Delgado, M.D.12
Lobanenkov, V.13
Klenova, E.14
-
22
-
-
24744440159
-
Conditional expression of the CTCF-paralogous transcriptional factor BORIS in normal cells results in demethylation and derepression of MAGE-A1 and reactivation of other cancer-testis genes
-
DOI 10.1158/0008-5472.CAN-05-0858
-
Conditional expression of the CTCF-paralogous transcriptional factor BORIS in normal cells results in demethylation and derepression of MAGE-A1 and reactivation of other cancer-testis genes. Vatolin S, Abdullaev Z, Pack SD, Flanagan PT, Custer M, Loukinov DI, Pugacheva E, Hong JA, Morse H, Schrump DS, et al. Cancer Res 2005 65 7751 7762 (Pubitemid 41297250)
-
(2005)
Cancer Research
, vol.65
, Issue.17
, pp. 7751-7762
-
-
Vatolin, S.1
Abdullaev, Z.2
Pack, S.D.3
Flanagan, P.T.4
Custer, M.5
Loukinov, D.I.6
Pugacheva, E.7
Hong, J.A.8
Morse III, H.9
Schrump, D.S.10
Risinger, J.I.11
Barrett, J.C.12
Lobanenkov, V.V.13
-
23
-
-
24744448032
-
Reciprocal binding of CTCF and BORIS to the NY-ESO-1 promoter coincides with derepression of this cancer-testis gene in lung cancer cells
-
DOI 10.1158/0008-5472.CAN-05-0823
-
Reciprocal binding of CTCF and BORIS to the NY-ESO-1 promoter coincides with derepression of this cancer-testis gene in lung cancer cells. Hong JA, Kang Y, Abdullaev Z, Flanagan PT, Pack SD, Fischette MR, Adnani MT, Loukinov DI, Vatolin S, Risinger JI, et al. Cancer Res 2005 65 7763 7774 (Pubitemid 41297251)
-
(2005)
Cancer Research
, vol.65
, Issue.17
, pp. 7763-7774
-
-
Hong, J.A.1
Kang, Y.2
Abdullaev, Z.3
Flanagan, P.T.4
Pack, S.D.5
Fischette, M.R.6
Adnani, M.T.7
Loukinov, D.I.8
Vatolin, S.9
Risinger, J.I.10
Custer, M.11
Chen, G.A.12
Zhao, M.13
Nguyen, D.M.14
Barrett, J.C.15
Lobanenkov, V.V.16
Schrump, D.S.17
-
24
-
-
33751029979
-
The testis-specific factor CTCFL cooperates with the protein methyltransferase PRMT7 in H19 imprinting control region methylation
-
The testis-specific factor CTCFL cooperates with the protein methyltransferase PRMT7 in H19 imprinting control region methylation. Jelinic P, Stehle JC, Shaw P, PLoS Biol 2006 4 355
-
(2006)
PLoS Biol
, vol.4
, pp. 5355
-
-
Jelinic, P.1
Stehle, J.C.2
Shaw, P.3
-
25
-
-
84857727055
-
Genomic imprinting and its relevance to congenital disease, infertility, molar pregnancy and induced pluripotent stem cell
-
Genomic imprinting and its relevance to congenital disease, infertility, molar pregnancy and induced pluripotent stem cell. Tomizawa S, Sasaki H, J Hum Genet 2012 57 84 91
-
(2012)
J Hum Genet
, vol.57
, pp. 84-91
-
-
Tomizawa, S.1
Sasaki, H.2
-
26
-
-
77952001181
-
Expression of a testis-specific form of Gal3st1 (CST), a gene essential for spermatogenesis, is regulated by the CTCF paralogous gene BORIS
-
Expression of a testis-specific form of Gal3st1 (CST), a gene essential for spermatogenesis, is regulated by the CTCF paralogous gene BORIS. Suzuki T, Kosaka-Suzuki N, Pack S, Shin DM, Yoon J, Abdullaev Z, Pugacheva E, Morse HC, Loukinov D, Lobanenkov V, Mol Cell Biol 2010 30 2473 2484
-
(2010)
Mol Cell Biol
, vol.30
, pp. 2473-2484
-
-
Suzuki, T.1
Kosaka-Suzuki, N.2
Pack, S.3
Shin, D.M.4
Yoon, J.5
Abdullaev, Z.6
Pugacheva, E.7
Morse, H.C.8
Loukinov, D.9
Lobanenkov, V.10
-
27
-
-
79960976523
-
Transcription factor BORIS (Brother of the Regulator of Imprinted Sites) directly induces expression of a cancer-testis antigen, TSP50, through regulated binding of BORIS to the promoter
-
Transcription factor BORIS (Brother of the Regulator of Imprinted Sites) directly induces expression of a cancer-testis antigen, TSP50, through regulated binding of BORIS to the promoter. Kosaka-Suzuki N, Suzuki T, Pugacheva EM, Vostrov AA, Morse HC, Loukinov D, Lobanenkov V, J Biol Chem 2011 286 27378 27388
-
(2011)
J Biol Chem
, vol.286
, pp. 27378-27388
-
-
Kosaka-Suzuki, N.1
Suzuki, T.2
Pugacheva, E.M.3
Vostrov, A.A.4
Morse, H.C.5
Loukinov, D.6
Lobanenkov, V.7
-
28
-
-
0037075032
-
The non-coding Air RNA is required for silencing autosomal imprinted genes
-
The non-coding Air RNA is required for silencing autosomal imprinted genes. Sleutels F, Zwart R, Barlow DP, Nature 2002 415 810 813 (Pubitemid 34150505)
-
(2002)
Nature
, vol.415
, Issue.6873
, pp. 810-813
-
-
Sleutels, F.1
Zwart, R.2
Barlow, D.P.3
-
29
-
-
54449083071
-
Stra8 and its inducer, retinoic acid, regulate meiotic initiation in both spermatogenesis and oogenesis in mice
-
Stra8 and its inducer, retinoic acid, regulate meiotic initiation in both spermatogenesis and oogenesis in mice. Anderson EL, Baltus AE, Roepers-Gajadien HL, Hassold TJ, de Rooij DG, van Pelt AM, Page DC, Proc Natl Acad Sci U S A 2008 105 14976 14980
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 14976-14980
-
-
Anderson, E.L.1
Baltus, A.E.2
Roepers-Gajadien, H.L.3
Hassold, T.J.4
De Rooij, D.G.5
Van Pelt, A.M.6
Page, D.C.7
-
30
-
-
55449103543
-
STRA8-deficient spermatocytes initiate, but fail to complete, meiosis and undergo premature chromosome condensation
-
STRA8-deficient spermatocytes initiate, but fail to complete, meiosis and undergo premature chromosome condensation. Mark M, Jacobs H, Oulad-Abdelghani M, Dennefeld C, Feret B, Vernet N, Codreanu CA, Chambon P, Ghyselinck NB, J Cell Sci 2008 121 3233 3242
-
(2008)
J Cell Sci
, vol.121
, pp. 3233-3242
-
-
Mark, M.1
Jacobs, H.2
Oulad-Abdelghani, M.3
Dennefeld, C.4
Feret, B.5
Vernet, N.6
Codreanu, C.A.7
Chambon, P.8
Ghyselinck, N.B.9
-
31
-
-
0029956804
-
Characterization of a premeiotic germ cell-specific cytoplasmic protein encoded by Stra8, a novel retinoic acid-responsive gene
-
DOI 10.1083/jcb.135.2.469
-
Characterization of a premeiotic germ cellspecific cytoplasmic protein encoded by Stra8, a novel retinoic acid-responsive gene. Oulad-Abdelghani M, Bouillet P, Decimo D, Gansmuller A, Heyberger S, Dolle P, Bronner S, Lutz Y, Chambon P, The Journal of cell biology 1996 135 469 477 (Pubitemid 26359339)
-
(1996)
Journal of Cell Biology
, vol.135
, Issue.2
, pp. 469-477
-
-
Oulad-Abdelghani, M.1
Bouillet, P.2
Decimo, D.3
Gansmuller, A.4
Heyberger, S.5
Dolle, P.6
Bronner, S.7
Lutz, Y.8
Chambon, P.9
-
32
-
-
46449101976
-
Expression of stimulated by retinoic acid gene 8 (Stra8) in Spermatogenic Cells Induced by retinoic acid: An in vivo study in vitamin A-sufficient postnatal murine testes
-
DOI 10.1095/biolreprod.107.066795
-
Expression of stimulated by retinoic acid gene 8 (Stra8) in spermatogenic cells induced by retinoic acid: an in vivo study in vitamin A-sufficient postnatal murine testes. Zhou Q, Nie R, Li Y, Friel P, Mitchell D, Hess RA, Small C, Griswold MD, Biol Reprod 2008 79 35 42 (Pubitemid 351931040)
-
(2008)
Biology of Reproduction
, vol.79
, Issue.1
, pp. 35-42
-
-
Zhou, Q.1
Nie, R.2
Li, Y.3
Friel, P.4
Mitchell, D.5
Hess, R.A.6
Small, C.7
Griswold, M.D.8
-
33
-
-
26944443679
-
The microtubule plus-end-tracking protein CLIP-170 associates with the spermatid manchette and is essential for spermatogenesis
-
DOI 10.1101/gad.344505
-
The microtubule plus-end-tracking protein CLIP-170 associates with the spermatid manchette and is essential for spermatogenesis. Akhmanova A, Mausset-Bonnefont AL, van Cappellen W, Keijzer N, Hoogenraad CC, Stepanova T, Drabek K, van der Wees J, Mommaas M, Onderwater J, et al. Genes Dev 2005 19 2501 2515 (Pubitemid 41483697)
-
(2005)
Genes and Development
, vol.19
, Issue.20
, pp. 2501-2515
-
-
Akhmanova, A.1
Mausset-Bonnefont, A.-L.2
Van Cappellen, W.3
Keijzer, N.4
Hoogenraad, C.C.5
Stepanova, T.6
Drabek, K.7
Van Der Wees, J.8
Mommaas, M.9
Onderwater, J.10
Van Der Meulen, H.11
Tanenbaum, M.E.12
Medema, R.H.13
Hoogerbrugge, J.14
Vreeburg, J.15
Uringa, E.-J.16
Grootegoed, J.A.17
Grosveld, F.18
Galjart, N.19
-
34
-
-
0036788073
-
Cell junction dynamics in the testis: Sertoli-germ cell interactions and male contraceptive development
-
Cell junction dynamics in the testis: Sertoli-germ cell interactions and male contraceptive development. Cheng CY, Mruk DD, Physiol Rev 2002 82 825 874
-
(2002)
Physiol Rev
, vol.82
, pp. 825-874
-
-
Cheng, C.Y.1
Mruk, D.D.2
-
35
-
-
0037007067
-
Paranodal junction formation and spermatogenesis require sulfoglycolipids
-
DOI 10.1073/pnas.032068299
-
Paranodal junction formation and spermatogenesis require sulfoglycolipids. Honke K, Hirahara Y, Dupree J, Suzuki K, Popko B, Fukushima K, Fukushima J, Nagasawa T, Yoshida N, Wada Y, Taniguchi N, Proc Natl Acad Sci U S A 2002 99 4227 4232 (Pubitemid 34285968)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.7
, pp. 4227-4232
-
-
Honke, K.1
Hirahara, Y.2
Dupree, J.3
Suzuki, K.4
Popko, B.5
Fukushima, K.6
Fukushima, J.7
Nagasawa, T.8
Yoshida, N.9
Wada, Y.10
Taniguchi, N.11
-
36
-
-
7444230925
-
Localization and expression of TSP50 protein in human and rodent testes
-
DOI 10.1016/j.urology.2004.05.012, PII S0090429504005898
-
Localization and expression of TSP50 protein in human and rodent testes. Xu HP, Yuan L, Shan J, Feng H, Urology 2004 64 826 832 (Pubitemid 39446083)
-
(2004)
Urology
, vol.64
, Issue.4
, pp. 826-832
-
-
Xu, H.-P.1
Yuan, L.2
Shan, J.3
Feng, H.L.4
-
37
-
-
0346562866
-
Derivation of embryonic germ cells and male gametes from embryonic stem cells
-
DOI 10.1038/nature02247
-
Derivation of embryonic germ cells and male gametes from embryonic stem cells. Geijsen N, Horoschak M, Kim K, Gribnau J, Eggan K, Daley GQ, Nature 2004 427 148 154 (Pubitemid 38094954)
-
(2004)
Nature
, vol.427
, Issue.6970
, pp. 148-154
-
-
Geijsen, N.1
Horoschak, M.2
Kim, K.3
Gribnau, J.4
Eggan, K.5
Daley, G.Q.6
-
38
-
-
38049019108
-
Culture and genetic modification of mouse germline stem cells
-
Culture and genetic modification of mouse germline stem cells. Kanatsu-Shinohara M, Shinohara T, Ann N Y Acad Sci 2007 1120 59 71
-
(2007)
Ann N y Acad Sci
, vol.1120
, pp. 59-71
-
-
Kanatsu-Shinohara, M.1
Shinohara, T.2
-
39
-
-
34347238237
-
Global gene expression profiling reveals similarities and differences among mouse pluripotent stem cells of different origins and strains
-
DOI 10.1016/j.ydbio.2007.05.004, PII S0012160607008809
-
Global gene expression profiling reveals similarities and differences among mouse pluripotent stem cells of different origins and strains. Sharova LV, Sharov AA, Piao Y, Shaik N, Sullivan T, Stewart CL, Hogan BL, Ko MS, Dev Biol 2007 307 446 459 (Pubitemid 47001365)
-
(2007)
Developmental Biology
, vol.307
, Issue.2
, pp. 446-459
-
-
Sharova, L.V.1
Sharov, A.A.2
Piao, Y.3
Shaik, N.4
Sullivan, T.5
Stewart, C.L.6
Hogan, B.L.M.7
Ko, M.S.H.8
-
40
-
-
13944262909
-
A germ cell origin of embryonic stem cell?
-
DOI 10.1242/dev.01586
-
A germ cell origin of embryonic stem cells? Zwaka TP, Thomson JA, Development 2005 132 227 233 (Pubitemid 40268273)
-
(2005)
Development
, vol.132
, Issue.2
, pp. 227-233
-
-
Zwaka, T.P.1
Thomson, J.A.2
-
41
-
-
34248347841
-
CTCF-dependent chromatin boundary element between the latency-associated transcript and ICP0 promoters in the herpes simplex virus type 1 genome
-
DOI 10.1128/JVI.02447-06
-
CTCF-dependent chromatin boundary element between the latency-associated transcript and ICP0 promoters in the herpes simplex virus type 1 genome. Chen Q, Lin L, Smith S, Huang J, Berger SL, Zhou J, Journal of virology 2007 81 5192 5201 (Pubitemid 46744429)
-
(2007)
Journal of Virology
, vol.81
, Issue.10
, pp. 5192-5201
-
-
Chen, Q.1
Lin, L.2
Smith, S.3
Huang, J.4
Berger, S.L.5
Zhou, J.6
-
42
-
-
78650758676
-
Histone H3K27ac separates active from poised enhancers and predicts developmental state
-
Histone H3K27ac separates active from poised enhancers and predicts developmental state. Creyghton MP, Cheng AW, Welstead GG, Kooistra T, Carey BW, Steine EJ, Hanna J, Lodato MA, Frampton GM, Sharp PA, et al. Proceedings of the National Academy of Sciences of the United States of America 2010 107 21931 21936
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, pp. 21931-21936
-
-
Creyghton, M.P.1
Cheng, A.W.2
Welstead, G.G.3
Kooistra, T.4
Carey, B.W.5
Steine, E.J.6
Hanna, J.7
Lodato, M.A.8
Frampton, G.M.9
Sharp, P.A.10
-
43
-
-
77951920690
-
C-Myc regulates transcriptional pause release
-
c-Myc regulates transcriptional pause release. Rahl PB, Lin CY, Seila AC, Flynn RA, McCuine S, Burge CB, Sharp PA, Young RA, Cell 2010 141 432 445
-
(2010)
Cell
, vol.141
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
Sharp, P.A.7
Young, R.A.8
-
44
-
-
34250745886
-
Nucleosome stability mediated by histone variants H3.3 and H2A.Z
-
DOI 10.1101/gad.1547707
-
Nucleosome stability mediated by histone variants H3.3 and H2A.Z. Jin C, Felsenfeld G, Genes & development 2007 21 1519 1529 (Pubitemid 46955724)
-
(2007)
Genes and Development
, vol.21
, Issue.12
, pp. 1519-1529
-
-
Jin, C.1
Felsenfeld, G.2
-
45
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
-
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions. Jin C, Zang C, Wei G, Cui K, Peng W, Zhao K, Felsenfeld G, Nature Genetics 2009 41 941 945
-
(2009)
Nature Genetics
, vol.41
, pp. 941-945
-
-
Jin, C.1
Zang, C.2
Wei, G.3
Cui, K.4
Peng, W.5
Zhao, K.6
Felsenfeld, G.7
-
46
-
-
77649099092
-
Distinct factors control histone variant H3.3 localization at specific genomic regions
-
Distinct factors control histone variant H3.3 localization at specific genomic regions. Goldberg AD, Banaszynski LA, Noh KM, Lewis PW, Elsaesser SJ, Stadler S, Dewell S, Law M, Guo X, Li X, et al. Cell 2010 140 678 691
-
(2010)
Cell
, vol.140
, pp. 678-691
-
-
Goldberg, A.D.1
Banaszynski, L.A.2
Noh, K.M.3
Lewis, P.W.4
Elsaesser, S.J.5
Stadler, S.6
Dewell, S.7
Law, M.8
Guo, X.9
Li, X.10
-
47
-
-
79956302047
-
TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
-
TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity. Williams K, Christensen J, Pedersen MT, Johansen JV, Cloos PA, Rappsilber J, Helin K, Nature 2011 473 343 348
-
(2011)
Nature
, vol.473
, pp. 343-348
-
-
Williams, K.1
Christensen, J.2
Pedersen, M.T.3
Johansen, J.V.4
Cloos, P.A.5
Rappsilber, J.6
Helin, K.7
-
48
-
-
33846590537
-
Chromosome-wide nucleosome replacement and H3.3 incorporation during mammalian meiotic sex chromosome inactivation
-
DOI 10.1038/ng1949, PII NG1949
-
Chromosome-wide nucleosome replacement and H3.3 incorporation during mammalian meiotic sex chromosome inactivation. Van der Heijden GW, Derijck AA, Posfai E, Giele M, Pelczar P, Ramos L, Wansink DG, Van der Vlag J, Peters AH, De Boer P, Nature Genetics 2007 39 251 258 (Pubitemid 46184358)
-
(2007)
Nature Genetics
, vol.39
, Issue.2
, pp. 251-258
-
-
Van Der Heijden, G.W.1
Derijck, A.A.H.A.2
Posfai, E.3
Giele, M.4
Pelczar, P.5
Ramos, L.6
Wansink, D.G.7
Van Der Vlag, J.8
Peters, A.H.F.M.9
De Boer, P.10
-
49
-
-
55449121084
-
BAT3 and SET1A form a complex with CTCFL/BORIS to modulate H3K4 histone dimethylation and gene expression
-
BAT3 and SET1A form a complex with CTCFL/BORIS to modulate H3K4 histone dimethylation and gene expression. Nguyen P, Bar-Sela G, Sun L, Bisht KS, Cui H, Kohn E, Feinberg AP, Gius D, Mol Cell Biol 2008 28 6720 6729
-
(2008)
Mol Cell Biol
, vol.28
, pp. 6720-6729
-
-
Nguyen, P.1
Bar-Sela, G.2
Sun, L.3
Bisht, K.S.4
Cui, H.5
Kohn, E.6
Feinberg, A.P.7
Gius, D.8
-
50
-
-
56549103395
-
The cohesin complex and its roles in chromosome biology
-
The cohesin complex and its roles in chromosome biology. Peters JM, Tedeschi A, Schmitz J, Genes & development 2008 22 3089 3114
-
(2008)
Genes & Development
, vol.22
, pp. 3089-3114
-
-
Peters, J.M.1
Tedeschi, A.2
Schmitz, J.3
-
51
-
-
46149113242
-
CTCF physically links cohesin to chromatin
-
DOI 10.1073/pnas.0801273105
-
CTCF physically links cohesin to chromatin. Rubio ED, Reiss DJ, Welcsh PL, Disteche CM, Filippova GN, Baliga NS, Aebersold R, Ranish JA, Krumm A, Proceedings of the National Academy of Sciences of the United States of America 2008 105 8309 8314 (Pubitemid 351904752)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.24
, pp. 8309-8314
-
-
Rubio, E.D.1
Reiss, D.J.2
Welcsh, P.L.3
Disteche, C.M.4
Filippova, G.N.5
Baliga, N.S.6
Aebersold, R.7
Ranish, J.A.8
Krumm, A.9
-
52
-
-
79958065572
-
Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity
-
Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity. Xiao T, Wallace J, Felsenfeld G, Molecular and cellular biology 2011 31 2174 2183
-
(2011)
Molecular and Cellular Biology
, vol.31
, pp. 2174-2183
-
-
Xiao, T.1
Wallace, J.2
Felsenfeld, G.3
-
53
-
-
6944231017
-
Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation
-
DOI 10.1038/ng1426
-
Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation. Yu W, Ginjala V, Pant V, Chernukhin I, Whitehead J, Docquier F, Farrar D, Tavoosidana G, Mukhopadhyay R, Kanduri C, et al. Nat Genet 2004 36 1105 1110 (Pubitemid 41184473)
-
(2004)
Nature Genetics
, vol.36
, Issue.10
, pp. 1105-1110
-
-
Yu, W.1
Ginjala, V.2
Pant, V.3
Chernukhin, I.4
Whitehead, J.5
Docquier, F.6
Farrar, D.7
Tavoosidana, G.8
Mukhopadhyay, R.9
Kanduri, C.10
Oshimura, M.11
Feinberg, A.P.12
Lobanenkov, V.13
Klenova, E.14
Ohlsson, R.15
-
54
-
-
34547871989
-
Genomic and expression profiling of human spermatocytic seminomas: Pathogenetic implications
-
DOI 10.1111/j.1365-2605.2007.00779.x
-
Genomic and expression profiling of human spermatocytic seminomas: pathogenetic implications. Looijenga LH, Stoop H, Hersmus R, Gillis AJ, Wolter Oosterhuis J, Int J Androl 2007 30 328 335 discussion 335-326 (Pubitemid 47254422)
-
(2007)
International Journal of Andrology
, vol.30
, Issue.4
, pp. 328-335
-
-
Looijenga, L.H.J.1
Stoop, H.2
Hersmus, R.3
Gillis, A.J.M.4
Wolter Oosterhuis, J.5
-
55
-
-
79951574778
-
BORIS/CTCFL-mediated transcriptional regulation of the hTERT telomerase gene in testicular and ovarian tumor cells
-
BORIS/CTCFL-mediated transcriptional regulation of the hTERT telomerase gene in testicular and ovarian tumor cells. Renaud S, Loukinov D, Alberti L, Vostrov A, Kwon YW, Bosman FT, Lobanenkov V, Benhattar J, Nucleic Acids Res 2011 39 862 873
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 862-873
-
-
Renaud, S.1
Loukinov, D.2
Alberti, L.3
Vostrov, A.4
Kwon, Y.W.5
Bosman, F.T.6
Lobanenkov, V.7
Benhattar, J.8
-
56
-
-
79954582740
-
Coordinated cancer germline antigen promoter and global DNA hypomethylation in ovarian cancer: Association with the BORIS/CTCF expression ratio and advanced stage
-
Coordinated cancer germline antigen promoter and global DNA hypomethylation in ovarian cancer: association with the BORIS/CTCF expression ratio and advanced stage. Woloszynska-Read A, Zhang W, Yu J, Link PA, Mhawech-Fauceglia P, Collamat G, Akers SN, Ostler KR, Godley LA, Odunsi K, Karpf AR, Clinical cancer research: an official journal of the American Association for Cancer Research 2011 17 2170 2180
-
(2011)
Clinical Cancer Research: An Official Journal of the American Association for Cancer Research
, vol.17
, pp. 2170-2180
-
-
Woloszynska-Read, A.1
Zhang, W.2
Yu, J.3
Link, P.A.4
Mhawech-Fauceglia, P.5
Collamat, G.6
Akers, S.N.7
Ostler, K.R.8
Godley, L.A.9
Odunsi, K.10
Karpf, A.R.11
-
57
-
-
77955687310
-
BORIS/CTCFL expression is insufficient for cancer-germline antigen gene expression and DNA hypomethylation in ovarian cell lines
-
BORIS/CTCFL expression is insufficient for cancer-germline antigen gene expression and DNA hypomethylation in ovarian cell lines. Woloszynska-Read A, James SR, Song C, Jin B, Odunsi K, Karpf AR, Cancer Immun 2010 10 6
-
(2010)
Cancer Immun
, vol.10
, pp. 6
-
-
Woloszynska-Read, A.1
James, S.R.2
Song, C.3
Jin, B.4
Odunsi, K.5
Karpf, A.R.6
-
58
-
-
78249277873
-
The structural complexity of the human BORIS gene in gametogenesis and cancer
-
The structural complexity of the human BORIS gene in gametogenesis and cancer. Pugacheva EM, Suzuki T, Pack SD, Kosaka-Suzuki N, Yoon J, Vostrov AA, Barsov E, Strunnikov AV, Morse HC, Loukinov D, Lobanenkov V, PloS one 2010 5 13872
-
(2010)
PloS One
, vol.5
, pp. 513872
-
-
Pugacheva, E.M.1
Suzuki, T.2
Pack, S.D.3
Kosaka-Suzuki, N.4
Yoon, J.5
Vostrov, A.A.6
Barsov, E.7
Strunnikov, A.V.8
Morse, H.C.9
Loukinov, D.10
Lobanenkov, V.11
-
59
-
-
38549148703
-
The vertebrate genome annotation (Vega) database
-
The vertebrate genome annotation (Vega) database. Wilming LG, Gilbert JG, Howe K, Trevanion S, Hubbard T, Harrow JL, Nucleic Acids Res 2008 36 753 760
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4753-4760
-
-
Wilming, L.G.1
Gilbert, J.G.2
Howe, K.3
Trevanion, S.4
Hubbard, T.5
Harrow, J.L.6
-
60
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Langmead B, Trapnell C, Pop M, Salzberg SL, Genome Biol 2009 10 25
-
(2009)
Genome Biol
, vol.10
, pp. 1825
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
61
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Model-based analysis of ChIP-Seq (MACS). Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS, Genome Biol 2008 9 137
-
(2008)
Genome Biol
, vol.9
, pp. 18137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
Liu, X.S.11
-
62
-
-
79251595543
-
A systems approach to analyze transcription factors in mammalian cells
-
A systems approach to analyze transcription factors in mammalian cells. Soler E, Andrieu-Soler C, Boer E, Bryne JC, Thongjuea S, Rijkers E, Demmers J, Ijcken W, Grosveld F, Methods 2011 53 151 162
-
(2011)
Methods
, vol.53
, pp. 151-162
-
-
Soler, E.1
Andrieu-Soler, C.2
Boer, E.3
Bryne, J.C.4
Thongjuea, S.5
Rijkers, E.6
Demmers, J.7
Ijcken, W.8
Grosveld, F.9
-
63
-
-
0032826179
-
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
-
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Hertz GZ, Stormo GD, Bioinformatics 1999 15 563 577 (Pubitemid 29462105)
-
(1999)
Bioinformatics
, vol.15
, Issue.7-8
, pp. 563-577
-
-
Hertz, G.Z.1
Stormo, G.D.2
-
64
-
-
4544341015
-
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
-
Article3
-
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Smyth GK, Stat Appl Genet Mol Biol 2004 3 Article3 http://www.degruyter.com/view/j/sagmb.2004.3.1/sagmb.2004.3.1.1027/ sagmb.2004.3.1.1027.xml
-
(2004)
Stat Appl Genet Mol Biol
, vol.3
-
-
Smyth, G.K.1
|