Similar taxonomic richness but different communities of ectomycorrhizas in native forests and non-native plantation forests

Mycorrhiza

Volumn 22, Issue 5, 2012, Pages 371-382

  O'Hanlon, Richard ^a   Harrington, Thomas J ^a  

^a UNIVERSITY OF LIMERICK   (Ireland)

Author keywords

Above ground; Morphotyping; Nursery; Picea sitchensis; Pinus sylvestris; Quercus spp.; RFLP

Indexed keywords

CONIFEROUS FOREST; DECIDUOUS FOREST; ECTOMYCORRHIZA; FUNGUS; INVASIVE SPECIES; MORPHOTYPE; MULTIVARIATE ANALYSIS; NATIVE SPECIES; PLANTATION FORESTRY; SPECIES RICHNESS; SPORE; TAXONOMY;

ARTICLE; BIODIVERSITY; CLASSIFICATION; ECOSYSTEM; GENETICS; MICROBIOLOGY; MYCORRHIZA; OAK; PINE; SPRUCE; SYMBIOSIS; TREE;

BIODIVERSITY; ECOSYSTEM; MYCORRHIZAE; PICEA; PINUS; QUERCUS; SYMBIOSIS; TREES;

ELAPHOMYCES GRANULATUS; LACCARIA; LACCARIA AMETHYSTINA; PICEA SITCHENSIS; PINUS SYLVESTRIS; QUERCUS;

EID: 84862229243     PISSN: 09406360     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00572-011-0412-0     Document Type: Article

References (95)

1. Agerer R (1987-2002) Colour atlas of ectomycorrhizae (1st-12th ed). Einhorn-Verlag, Schwäbisch Gmünd.
2. Agerer R (2001) Exploration types of ectomycorrhizae-a proposal to classify ectomycorrhizal mycelial systems according to their patterns of differentiation and putative ecological importance. Mycorrhiza 11: 107-114.
3. Alexander I, Watling R (1987) Macrofungi of Sitka spruce in Scotland. Proc R Soc Edinb 93: 107-115.
4. Anonymous (2006) Sampling and soil analysis. Available at http://www. icp-forests. org/pdf/Chapt_3a_2006(2). pdf.
5. Baier R, Ingenhaag J, Blaschke H, Göttlein A, Agerer R (2006) Vertical distribution of an ectomycorrhizal community in upper soil horizons of a young Norway spruce (Picea abies [L.] Karst.) stand of the Bavarian Limestone Alps. Mycorrhiza 16: 197-206.
6. Barreotavena MB, Pildain MB, Salgado S, Eberhart JL (2010) Molecular identification of ectomycorrhizas associated with Ponderossa pine seedlings in Patagonian nurseries (Argentina). Can J For R 40: 1940-1950.
7. Bothwell KS, Prescott CE, Jones MD (2001) Factors contributing to the superior growth and N nutrition of 11-year-old lodgepole pine compared with Sitka spruce on a N-poor cedar-hemlock cutover. Can J For Res 31: 1272-1279.
8. Bruns TD, Bidartondo M, Taylor DL (2002) Host specificity in ectomycorrhizal communities: what do the exceptions tell us? Integ Comp Biol 42: 352-359.
9. Buee M, Courty PE, Mignot D, Garbaye J (2007) Soil niche effect on species diversity and catabolic activities in an ectomycorrhizal fungal community. Soil Biol Biochem 39: 1947-1955.
10. Buee M, Maurice JP, Zeller B, Andrianarisoa S, Ranger J, Courtecuisse R, Marçais B, Le Tacon F (2011) Influence of tree species on richness and diversity of epigeous fungal communities in a French temperate forest stand. Fungal Ecol 4: 22-31.
11. Cline ET, Ammirati JF, Edmonds RL (2005) Does proximity to mature trees influence ectomycorrhizal fungus communities of Douglas-fir seedlings? New Phytol 166: 993-1009.
12. Cole EE, Mitchell FJG (2003) Human impact on the Irish landscape during the late Holocene inferred from palynological studies at three peatland sites. Holocene 13: 507-515.
13. Colwell RK (2004) EstimateS: statistical estimate of species richness and shared species from samples, Version 7. at http://viceroy. eeb. uconn. edu/estimates.
14. Colwell RK, Mao CX, Chang J (2004) Interpolating, extrapolating, and comparing incidence-based species accumulation curves. Ecology 85: 2717-2727.
15. Courty P, Franc A, Pierrat J, Garbaye J (2008) Temporal changes in the ectomycorrhizal community in two soil horizons of a temperate oak forest. Appl Environ Microb 74: 5792-5801.
16. Cross JR (2006) The potential natural vegetation of Ireland. Biol Environ 106B: 65-116.
17. Cullings KW, Parker VT, Finley SK, Vogler DR (2000) Ectomycorrhizal specificity patterns in a mixed Pinus contorta and Picea engelmannii stand in Yellowstone National Park. Appl Environ Microbiol 66: 4988-4991.
18. Dahlberg A, Jonssen L, Nylund J (1997) Species diversity and distribution of biomass above and below ground among ectomycorrhizal fungi in an old-growth Norway spruce forest in south Sweden. Can J Bot 75: 1323-1335.
19. Department of Agriculture, Forestry and Food (1996) Growing for the future. A strategic plan for the development of the forestry sector in Ireland. Department of Agriculture, Forestry and Food, Dublin.
20. Dickie IA, Reich PB (2005) Ectomycorrhizal fungal communities at forest edges. J Ecol 93: 244-255.
21. Dickie IA, Bing X, Koide R (2002) Vertical niche differentiation of ectomycorrhizal hyphae in soil as shown by T-RFLP analysis. New Phytol 156: 527-535.
22. Dickie IA, Avis PG, McLaughlin DJ, Reich PB (2003) Good-enough RFLP matcher (GERM) program. Mycorrhiza 13: 171-172.
23. Dickie IA, Bolstridge N, Cooper JA, Peltzer DA (2010) Co-invasion by Pinus and its mycorrhizal fungi. New Phytol 187: 475-484.
24. Druebert C, Lang C, Valtanen K, Polle A (2009) Beech carbon productivity as driver of ectomycorrhizal abundance and diversity. Plant Cell Environ 32: 992-1003.
25. MET Eireann (2011) Ireland's meteorological service. at http://www. met. ie/.
26. Erland S, Taylor AFS (2002) Diversity of ectomycorrhizal communities in relation to the abiotic environment. In: van der Heijden M, Sanders I (eds) The ecology of mycorrhizas. ecological studies series, vol 157. Springer, Berlin, pp 163-200.
27. Farrelly N, Ni Dhubhain A, Nieuwenhuis M (2011) Site index of Sitka spruce (Picea sitchensis) in relation to different measures of site quality in Ireland. Can J For Res 41: 265-278.
28. Ferris R, Peace AJ, Newton AC (2000) Macrofungal communities of low land Scot's pine and Norway spruce plantations in England: relationships with site factors and stand structure. For Ecol Manage 131: 255-267.
29. Flynn D, Newton AC, Ingleby K (1998) Ectomycorrhizal colonisation of Sitka spruce [Picea sitchensis] (Bong.) Carr] seedlings in a Scottish plantation forest. Mycorrhiza 7: 313-317.
30. Forest Resources Assessment (2010) Global forest resource assessment 2010 main report. Food and Agriculture Organisation, Rome.
31. Gardener MJ, Radford T (1980) Soil associations of Ireland and their land use potential. An Foras Talúntais, Dublin.
32. Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2: 113-118.
33. Gardes M, Bruns TD (1996) Community structure of ectomycorrhizal fungi in a Pinus muricata forest: above- and below-ground views. Can J Bot 74: 1572-1583.
34. Genney DR, Anderson IC, Alexander IJ (2006) Fine-scale distribution of pine ectomycorrhizas and their extrametrical mycelium. New Phytol 170: 381-390.
35. Gherbi H, Delaruelle C, Selosse MA, Martin F (1999) High genetic diversity in a population of the ectomycorrhizal basidiomycete Laccaria amethystina in a 150-year-old beech forest. Mol Ecol 8: 2003-2013.
36. Gibson F, Deacon JW (1988) Experimental study of establishment of ectomycorrhizas in different regions of birch root systems. Trans Br Mycol Soc 91: 239-251.
37. Goodman DM, Trofymow JA (1998) Comparison of communities of ectomycorrhizal fungi in old growth and mature stands of Douglas fir at two sites on southern Vancouver Island. Can J For Res 28: 574-581.
38. Grogan HM, O'Neil JJ, Mitchell DT (1994) Mycorrhizal associations of Sitka spruce seedlings propagated in Irish tree nurseries. Eur J For Path 24: 335-344.
39. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98.
40. Hall TA (2005) BioEdit v7. 0. 5. at: http://www. mbio. ncsu. edu/bioedit/page1. html.
41. Helm DJ, Allen EB, Trappe JM (1996) Mycorrhizal chronose-quence near Exit Glacier, Alaska. Can J Bot 74: 1496-1506.
42. Heslin MC, Blasius D, McElhinney C, Mitchell DT (1992) Mycorrhizal and associated fungi of Sitka spruce in Irish forest mixed stands. Eur J Forest Pathol 22: 46-57.
43. Horton TR, Bruns TD (2001) The molecular revolution in ectomycorrhizal ecology: Peeking into the black-box. Mol Ecol 10: 1855-1871.
44. Humphrey JW, Newton AC, Peace AJ, Holden E (2000) The importance of conifer plantations in northern Britain as a habitat for native fungi. Biol Conserv 96: 241-252.
45. Humphrey JW, Ferris R, Quine C (2003) Biodiversity in Britain's planted forests. Forestry Commission, Edinburgh pp 51-62.
46. Ishida TA, Nara K, Hogetsu T (2007) Host effects on ectomycorrhizal fungal communities: insight from eight host species in mixed conifer-broadleaf Forests. New Phytol 174: 430-440.
47. Izzo AD, Agbowo J, Bruns TD (2005) Detection of plot-level changes in ectomycorrhizal communities across years in an old-growth mixed-conifer forest. New Phytol 166: 619-630.
48. Jones MD, Durall DM, Harniman SMK, Classen DC, Simard SW (1997) Ectomycorrhizal diversity on Betula papyrifera and Pseudotsuga menziesii seedlings grown in the greenhouse or outplanted in single-species and mixed plots in southern British Columbia. Can J For Res 27: 1872-1889.
49. Joyce P, O'Carroll N (2002) Sitka spruce in Ireland. COFORD, Dublin.
50. Jumpponen J, Trappe JM, Cázares E (1999) Ectomycorrhizal fungi in Lyman Lake Basin: a comparison between primary and secondary successional sites. Mycologia 91: 575-582.
51. Koide RT, Shumway DL, Xu B, Sharda JN (2007) On temporal partitioning of a community of ectomycorrhizal fungi. New Phytol 174: 420-429.
52. Kõljalg U, Larsson K-H, Abarenkov K, Nilsson RH, Alexander IJ, Eberhardt U, Erland S, Høiland K, Kjøller R, Larsson E, Pennanen T, Sen R, Taylor AFS, Tedersoo L, Vrålstad T, Ursing BM (2005) UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. New Phytol 166: 1063-1068.
53. Kranabetter JM (2004) Ectomycorrhizal community effects on hybrid spruce seedling growth and nutrition in clearcuts. Can J Bot 82: 983-991.
54. Lang C, Seven J, Polle A (2011) Host preferences and differential contributions of deciduous tree species shape mycorrhizal species richness in a mixed Central European forest. Mycorrhiza 21: 297-308.
55. Luoma DL, Eberhart JL, Molina R, Stockdale CA (2006) The spatial influence of Psuedotsuga menziessi retention trees on ectomycorrhizal diversity. Can J For Res 36: 2561-2573.
56. Magurran AE (2004) Measuring biological diversity. Wiley, Oxford.
57. McCune B, Grace JB (2002) Analysis of ecological communities. MjM Software Design, Oregon.
58. Menkis A, Vasiliauskas R, Taylor AFS, Stenlid J, Finlay R (2005) Fungal communities in mycorrhizal roots of conifer seedlings in forest nurseries under different cultivation systems, assessed by morphotyping, direct sequencing and mycelial isolation. Mycorrhiza 16: 33-41.
59. Mikola P (1973) Application of mycorrhizal symbiosis in forestry practice. In: Marks GC, Kozlowski TT (eds) Ectomycorrhizae: their ecology and physiology. Academic, New York, pp 383-411.
60. Molina RJ, Massicotte HB, Trappe JM (1992) Specificity phenomena in mycorrhizal symbioses: Community-ecological consequences and practical implications. In: Allen MF (ed) Mycorrhizal functioning, an integrative plant-fungal process. Chapman and Hall, New York, pp 357-423.
61. Moreau P-A, Peintner U, Gardes M (2006) Phylogeny of the ectomycorrhizal mushroom genus Alnicola (Basidiomycota, Cortinariaceae) based on rDNA sequences with special emphasis on host specificity and morphological characters. Mol Phylogenet Evol 38: 794-807.
62. Newton AC (1992) Towards a functional classification of ectomycorrhizal fungi. Mycorrhiza 2: 75-79.
63. Nuñez MA, Horton TR, Simberloff D (2009) Lack of belowground mutualisms hinders Pinaceae invasions. Ecology 90: 2352-2359.
64. O'Hanlon R (2011) The diversity of fungi in four Irish forest types. PhD Dissertation, University of Limerick, Limerick, Ireland.
65. O'Hanlon R, Harrington TJ (2011a) Diversity and distribution of mushroom forming fungi (Agaricomycetes) in Ireland. Biol Environ 111B: 117-133.
66. O'Hanlon R, Harrington TJ (2011b) The macrofungal component of biodiversity in Irish Sitka spruce forests. Irish Forestry (in press).
67. Palfner G, Casanova-Katny AM, Read DJ (2005) The mycorrhizal community in a forest chronosequence of Sitka spruce [Picea sitchensis (Bong.) Carr.] in Northern England. Mycorrhiza 15: 571-579.
68. Peay KG, Kennedy PG, Bruns TD (2011) Rethinking ectomycorrhizal succession: are root density and hyphal exploration types drivers of spatial and temporal zonation? Fungal Ecol 4: 233-240.
69. Pena R, Offermann C, Simon J, Naumann PS, Geßler A, Holst J, Mayer H, Kögel-Knabner I, Rennenberg H, Polle A (2010) Girdling affects ectomycorrhizal diversity and reveals functional differences of EM community composition in a mature beech forest (Fagus sylvatica). Appl Environ Microbiol 76: 1831-1841.
70. Peter M, Ayer F, Egli S, Honegger R (2001) Above and belowground community structure of ectomycorrhizal fungi in three Norway spruce (Picea abies) stands in Switzerland. Can J Bot 79: 1134-1151.
71. Pickles BJ, Genney DR, Potts JP, Lennon JJ, Anderson IC, Alexander IJ (2010) Spatial and temporal ecology of Scot's pine ectomycorrhizas. New Phytol 186: 755-768.
72. Porter TM, Skillman JE, Moncalvo JM (2008) Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario. Mol Ecol 17: 3037-3050.
73. Pringle A, Bever JD, Gardes M, Parrent JL, Rillig MC, Klironomos JN (2009) Mycorrhizal symbioses and plant invasions. Annu Rev Ecol Evol Syst 40: 699-715.
74. Redecker D, Szaro TM, Bowman JR, Bruns TD (2001) Small genets of Lactarius xanthogalactus, Russula cremoricolor, and Amanita francheti in late stage ectomycorrhizal successions. Mol Ecol 10: 1025-1034.
75. Richard F, Millot S, Gardes M, Selosse MA (2005) Diversity and specificity of ectomycorrhizal fungi retrieved from an old-growth Mediterranean forest dominated by Quercus ilex. New Phytol 166: 1011-1023.
76. Roche JR, Mitchell FJG, Waldren S (2009) Plant community ecology of Pinus sylvestris, an extirpated species reintroduced to Ireland. Biodiv Conserv 18: 2185-2203.
77. Scattolin L, Montecchio L, Mosca E, Agerer R (2008) Vertical distribution of the ectomycorrhizal community in the top soil of Norway spruce stands. Eur J For Res 127: 347-357.
78. Smith SE, Read DJ (2008) Mycorrhizal symbiosis, 3rd edn. Academic, London.
79. Smith ME, Douhan GW, Rizzo DM (2007) Ectomycorrhizal community structure in a xeric Quercus woodland based on rDNA sequence analysis of sporocarps and pooled roots. New Phytol 174: 847-863.
80. Straatsma G, Ayer F, Egli S (2001) Species richness, abundance and phylogeny of fungal fruit bodies over 21 years in a Swiss forest plot. Mycol Res 105: 512-523.
81. Taylor AFS (2002) Fungal diversity in ectomycorrhizal communities: sampling effort and species detection. Plant Soil 244: 19-28.
82. Taylor AFS, Alexander IJ (1989) Demography and population of ectomycorrhizas of Sitka spruce fertilized with N. Agricult Ecosys Environ 28: 493-496.
83. Tedersoo L, Suvi T, Beaver K, Kõljalg U (2007) Ectomycorrhizal fungi of the Seychelles: diversity patterns and host shifts from the native Vateriopsis seychellarum (Dipterocarpaceae) and Intsia bijuga (Caesalpiniaceae) to the introduced Eucalyptus robusta (Myrtaceae), but not Pinus caribea (Pinaceae). New Phytol 175: 321-333.
84. Tennant D (1975) A test of a modified line intersect method of estimating root length. J Ecol 63: 995-1001.
85. Thomas GW, Jackson RM (1979) Sheathing mycorrhizas of nursery grown Picea sitchensis. Trans Br Mycol Soc 73: 117-125.
86. Thomas GW, Rogers D, Jackson R (1983) Changes in the mycorrhizal status of Sitka spruce following outplanting. Plant Soil 71: 319-323.
87. Trocha LK, Kałucka I, Stasińska M, Nowak W, Dabert M, Leski T, Rudawska M, Oleksyn J (2011) Ectomycorrhizal fungal communities of native and non-native Pinus and Quercus species in a common garden of 35-year-old trees. Mycorrhiza. doi: 10. 1007/s00572-011-0387-x.
88. UK Forestry Commission (2003) National inventory of woodland and trees: Great Britain. The Forestry Commission, Edinburgh.
89. Valentine LL, Fiedler TL, Hart AN, Petersen CA, Berninghausen HK, Southworth D (2004) Biodiversity of ectomycorrhizal fungi associated with Quercus garryana. Can J Bot 82: 123-135.
90. Vellinga EC, Wolfe BE, Pringle A (2009) Global patterns of ectomycorrhizal introductions. New Phytol 181: 960-973.
91. Visser S (1995) Ectomycorrhizal succession in jack pine stands following wildfire. New Phytol 129: 389-401.
92. Wang B, Qiu YL (2006) Phylogenetic distribution and evolution of mycorrhizas in land plants. Mycorrhiza 16: 299-363.
93. White TJ, Bruns TD, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, New York pp 315-322.
94. Whittaker RH (1965) Dominance and diversity in plant communities. Science 147: 250-260.
95. Wurzburger N, Hartshorn AS, Hendrick RL (2004) Ectomycorrhizal fungal community structure across a bog-forest ecotone in southeastern Alaska. Mycorrhiza 14: 383-389.