메뉴 건너뛰기




Volumn 2011, Issue , 2011, Pages

The modENCODE data coordination center: Lessons in harvesting comprehensive experimental details

Author keywords

[No Author keywords available]

Indexed keywords

CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER;

EID: 84862196096     PISSN: 17580463     EISSN: None     Source Type: Journal    
DOI: 10.1093/database/bar023     Document Type: Article
Times cited : (25)

References (24)
  • 1
    • 79959503826 scopus 로고    scopus 로고
    • The international hapmap project
    • International HapMap Consortium.
    • International HapMap Consortium. (2003) The International HapMap Project. Nature, 426, 789-796.
    • (2003) Nature , vol.426 , pp. 789-796
  • 2
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • Durbin, R. M., Abecasis, G. R., Altshuler, D. L. et al. (2010) A map of human genome variation from population-scale sequencing. Nature, 467, 1061-1073.
    • (2010) Nature , vol.467 , pp. 1061-1073
    • Durbin, R.M.1    Abecasis, G.R.2    Altshuler, D.L.3
  • 4
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: A platform for investigating biology
    • C. elegans Sequencing Consortium.
    • C. elegans Sequencing Consortium. (1998) Genome sequence of the nematode C. elegans: A platform for investigating biology. Science, 282, 2012-2018.
    • (1998) Science , vol.282 , pp. 2012-2018
  • 7
    • 33645277092 scopus 로고    scopus 로고
    • The mged ontology: A resource for semantics-based description of microarray experiments
    • Whetzel, P. L., Parkinson, H., Causton, H. C. et al. (2006) The MGED Ontology: A resource for semantics-based description of microarray experiments. Bioinformatics, 22, 866-873.
    • (2006) Bioinformatics , vol.22 , pp. 866-873
    • Whetzel, P.L.1    Parkinson, H.2    Causton, H.C.3
  • 8
    • 33845699793 scopus 로고    scopus 로고
    • NCBI GEO standards and services for microarray data [1]
    • DOI 10.1038/nbt1206-1471, PII NBT12061471
    • Edgar, R. and Barrett, T. (2006) NCBI GEO standards and services for microarray data. Nat. Biotechnol., 24, 1471-1472. (Pubitemid 44967456)
    • (2006) Nature Biotechnology , vol.24 , Issue.12 , pp. 1471-1472
    • Edgar, R.1    Barrett, T.2
  • 9
    • 79959373803 scopus 로고    scopus 로고
    • Minimum compliance for a microarray experiment?
    • NatureEditors.
    • NatureEditors. (2006) Minimum compliance for a microarray experiment? Nat. Genet., 38, 1089.
    • (2006) Nat. Genet. , vol.38 , pp. 1089
  • 10
    • 45749118607 scopus 로고    scopus 로고
    • Promoting coherent minimum reporting guidelines for biological and biomedical investigations: The mibbi project
    • Taylor, C. F., Field, D., Sansone, S. A. et al. (2008) Promoting coherent minimum reporting guidelines for biological and biomedical investigations: The MIBBI project. Nat. Biotechnol., 26, 889-896.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 889-896
    • Taylor, C.F.1    Field, D.2    Sansone, S.A.3
  • 11
    • 33845643077 scopus 로고    scopus 로고
    • A simple spreadsheet-based, miame-supportive format for microarray data: Mage-Tab
    • Rayner, T. F., Rocca-Serra, P., Spellman, P. T. et al. (2006) A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TA B. BMC Bioinformatics, 7, 489.
    • (2006) BMC Bioinformatics , vol.7 , pp. 489
    • Rayner, T.F.1    Rocca-Serra, P.2    Spellman, P.T.3
  • 15
    • 84864041833 scopus 로고
    • A C. elegans database, Documentation, code and data available from anonymous FTP servers at and lirmm.lirmm.fr, cele.mrc-lmb.cam.ac.uk, ncbi.nlm. nih.gov
    • Durbin, R. and Thierry-Mieg, J. (1991) A C. elegans database, Documentation, code and data available from anonymous FTP servers at and lirmm.lirmm.fr, cele.mrc-lmb.cam.ac.uk, ncbi.nlm. nih.gov.
    • (1991)
    • Durbin, R.1    Thierry-Mieg, J.2
  • 16
    • 78650331647 scopus 로고    scopus 로고
    • Identification of functional elements and regulatory circuits by drosophila modencode
    • Roy, S., Ernst, J., Kharchenko, P. V. et al. (2010) Identification of functional elements and regulatory circuits by Drosophila modENCOD E. Science, 330, 1787-1797.
    • (2010) Science , vol.330 , pp. 1787-1797
    • Roy, S.1    Ernst, J.2    Kharchenko, P.V.3
  • 17
    • 78650410139 scopus 로고    scopus 로고
    • Integrative analysis of the caenorhabditis elegans genome by the modencode project
    • Gerstein, M. B., Lu, Z. J., Van Nostrand, E. L. et al. (2010) Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science, 330, 1775-1787.
    • (2010) Science , vol.330 , pp. 1775-1787
    • Gerstein, M.B.1    Lu, Z.J.2    Van Nostrand, E.L.3
  • 19
    • 22044443709 scopus 로고    scopus 로고
    • The sequence ontology: A tool for the unification of genome annotations
    • Eilbeck, K., Lewis, S. E., Mungall, C. J. et al. (2005) The Sequence Ontology: A tool for the unification of genome annotations. Genome Biol., 6, R44.
    • (2005) Genome Biol. , vol.6
    • Eilbeck, K.1    Lewis, S.E.2    Mungall, C.J.3
  • 21
    • 84949805606 scopus 로고    scopus 로고
    • Modeling biomedical experimental processes with obi
    • Brinkman, R. R., Courtot, M., Derom, D. et al. (2010) Modeling biomedical experimental processes with OB I. J. Biomed. Semantics, 1 (Suppl. 1), S7.
    • (2010) J. Biomed. Semantics , vol.1 , Issue.SUPPL. 1
    • Brinkman, R.R.1    Courtot, M.2    Derom, D.3
  • 22
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and samtools
    • Li, H., Handsaker, B., Wysoker, A. et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3
  • 24
    • 0037293354 scopus 로고    scopus 로고
    • Building a cell and anatomy ontology of Caenorhabditis elegans
    • DOI 10.1002/cfg.248
    • Lee, R. Y. and Sternberg, P. W. (2003) Building a cell and anatomy ontology of Caenorhabditis elegans. Comp. Funct. Genomics, 4, 121-126. (Pubitemid 36304751)
    • (2003) Comparative and Functional Genomics , vol.4 , Issue.1 , pp. 121-126
    • Lee, R.Y.N.1    Sternberg, P.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.