-
1
-
-
0032526320
-
Overexpression of Rad51 protein stimulates homologous recombination and increases resistance of mammalian cells to ionizing radiation
-
DOI 10.1093/nar/26.12.2859
-
Vispe, S., Cazaux, C., Lesca, C. and Defais, M. (1998) Overexpression of Rad51 protein stimulates homologous recombination and increases resistance of mammalian cells to ionizing radiation. Nucleic Acids Res., 26, 2859-2864. (Pubitemid 28297517)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.12
, pp. 2859-2864
-
-
Vispe, S.1
Cazaux, C.2
Lesca, C.3
Defais, M.4
-
2
-
-
0032518657
-
Rad51-deficient vertebrate cells accumulate chromosomal breaks prior to cell death
-
DOI 10.1093/emboj/17.2.598
-
Sonoda, E., Sasaki, M.S., Buerstedde, J.M., Bezzubova, O., Shinohara, A., Ogawa, H., Takata, M., Yamaguchi-Iwai, Y. and Takeda, S. (1998) Rad51-deficient vertebrate cells accumulate chromosomal breaks prior to cell death. EMBO J., 17, 598-608. (Pubitemid 28045499)
-
(1998)
EMBO Journal
, vol.17
, Issue.2
, pp. 598-608
-
-
Sonoda, E.1
Sasaki, M.S.2
Buerstedde, J.-M.3
Bezzubova, O.4
Shinohara, A.5
Ogawa, H.6
Takata, M.7
Yamaguchi-Iwai, Y.8
Takeda, S.9
-
3
-
-
0029987450
-
Targeted disruption of the Rad51 gene leads to lethality in embryonic mice
-
DOI 10.1073/pnas.93.13.6236
-
Tsuzuki, T., Fujii, Y., Sakumi, K., Tominaga, Y., Nakao, K., Sekiguchi, M., Matsushiro, A., Yoshimura, Y. and Morita, T. (1996) Targeted disruption of the Rad51 gene leads to lethality in embryonic mice. Proc. Natl Acad. Sci. USA, 93, 6236-6240. (Pubitemid 26230288)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.13
, pp. 6236-6240
-
-
Tsuzuki, T.1
Fujii, Y.2
Sakumi, K.3
Tominaga, Y.4
Nakao, K.5
Sekiguchi, M.6
Matsushiro, A.7
Yoshimura, Y.8
Morita, T.9
-
4
-
-
0842329805
-
Rad51 overexpression promotes alternative double-strand break repair pathways and genome instability
-
DOI 10.1038/sj.onc.1207098
-
Richardson, C., Stark, J.M., Ommundsen, M. and Jasin, M. (2004) Rad51 overexpression promotes alternative double-strand break repair pathways and genome instability. Oncogene, 23, 546-553. (Pubitemid 38175009)
-
(2004)
Oncogene
, vol.23
, Issue.2
, pp. 546-553
-
-
Richardson, C.1
Stark, J.M.2
Ommundsen, M.3
Jasin, M.4
-
5
-
-
0034672182
-
Over-expression of wild-type Rad51 correlates with histological grading of invasive ductal breast cancer
-
Maacke, H., Opitz, S., Jost, K., Hamdorf, W., Henning, W., Kruger, S., Feller, A.C., Lopens, A., Diedrich, K., Schwinger, E. et al. (2000) Over-expression of wild-type Rad51 correlates with histological grading of invasive ductal breast cancer. Int. J. Cancer, 88, 907-913.
-
(2000)
Int. J. Cancer
, vol.88
, pp. 907-913
-
-
Maacke, H.1
Opitz, S.2
Jost, K.3
Hamdorf, W.4
Henning, W.5
Kruger, S.6
Feller, A.C.7
Lopens, A.8
Diedrich, K.9
Schwinger, E.10
-
6
-
-
0006279648
-
The synergistic interaction between RecA protein and SSB protein during DNA strand exchange
-
CRC press
-
Kowalczykowski, S.C. and Zarling, D.A. (1995) The synergistic interaction between RecA protein and SSB protein during DNA strand exchange. Gene Targeting (Ed Vega). CRC press, pp. 167-210.
-
(1995)
Gene Targeting (Ed Vega).
, pp. 167-210
-
-
Kowalczykowski, S.C.1
Zarling, D.A.2
-
7
-
-
2342574864
-
Genetic re-engineering of Saccharomyces cerevisiae RAD51 leads to a significant increase in the frequency of gene repair in vivo
-
DOI 10.1093/nar/gkh506
-
Liu, L., Maguire, K.K. and Kmiec, E.B. (2004) Genetic re-engineering of Saccharomyces cerevisiae RAD51 leads to a significant increase in the frequency of gene repair in vivo. Nucleic Acids Res., 32, 2093-2101. (Pubitemid 38854765)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.7
, pp. 2093-2101
-
-
Liu, L.1
Maguire, K.K.2
Kmiec, E.B.3
-
8
-
-
77952280117
-
The discovery of zinc fingers and their development for practical applications in gene regulation and genome manipulation
-
Klug, A. (2010) The discovery of zinc fingers and their development for practical applications in gene regulation and genome manipulation. Q. Rev. Biophys., 43, 1-21.
-
(2010)
Q. Rev. Biophys.
, vol.43
, pp. 1-21
-
-
Klug, A.1
-
9
-
-
23344453535
-
Rad51 siRNA delivered by HVJ envelope vector enhances the anti-cancer effect of cisplatin
-
DOI 10.1002/jgm.753
-
Ito, M., Yamamoto, S., Nimura, K., Hiraoka, K., Tamai, K. and Kaneda, Y. (2005) Rad51 siRNA delivered by HVJ envelope vector enhances the anti-cancer effect of cisplatin. J. Gene Med., 7, 1044-1052. (Pubitemid 41195066)
-
(2005)
Journal of Gene Medicine
, vol.7
, Issue.8
, pp. 1044-1052
-
-
Ito, M.1
Yamamoto, S.2
Nimura, K.3
Hiraoka, K.4
Tamai, K.5
Kaneda, Y.6
-
10
-
-
0032540152
-
In vitro and in vivo potentiation of radiosensitivity of malignant gliomas by antisense inhibition of the RAD51 gene
-
DOI 10.1006/bbrc.1998.8440
-
Ohnishi, T., Taki, T., Hiraga, S., Arita, N. and Morita, T. (1998) In vitro and in vivo potentiation of radiosensitivity of malignant gliomas by antisense inhibition of the RAD51 gene. Biochem. Biophys. Res. Commun., 245, 319-324. (Pubitemid 28418498)
-
(1998)
Biochemical and Biophysical Research Communications
, vol.245
, Issue.2
, pp. 319-324
-
-
Ohnishi, T.1
Taki, T.2
Hiraga, S.3
Arita, N.4
Morita, T.5
-
11
-
-
0035902614
-
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA
-
DOI 10.1073/pnas.111005398
-
Yu, X., Jacobs, S.A., West, S.C., Ogawa, T. and Egelman, E.H. (2001) Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA. Proc. Natl Acad. Sci. USA, 98, 8419-8424. (Pubitemid 32678044)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.15
, pp. 8419-8424
-
-
Yu, X.1
Jacobs, S.A.2
West, S.C.3
Ogawa, T.4
Egelman, E.H.5
-
12
-
-
0027167689
-
Similarity of the yeast RAD51 filament to the bacterial RecA filament
-
Ogawa, T., Yu, X., Shinohara, A. and Egelman, E.H. (1993) Similarity of the yeast RAD51 filament to the bacterial RecA filament. Science, 259, 1896-1899. (Pubitemid 23124460)
-
(1993)
Science
, vol.259
, Issue.5103
, pp. 1896-1899
-
-
Ogawa, T.1
Yu, X.2
Shinohara, A.3
Egelman, E.H.4
-
13
-
-
71049127349
-
A non-canonical DNA structure enables homologous recombination in various genetic systems
-
Masuda, T., Ito, Y., Terada, T., Shibata, T. and Mikawa, T. (2009) A non-canonical DNA structure enables homologous recombination in various genetic systems. J. Biol. Chem., 284, 30230-30239.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 30230-30239
-
-
Masuda, T.1
Ito, Y.2
Terada, T.3
Shibata, T.4
Mikawa, T.5
-
14
-
-
44349162159
-
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
-
Chen, Z., Yang, H. and Pavletich, N.P. (2008) Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures. Nature, 453, 489-484.
-
(2008)
Nature
, vol.453
, pp. 489-484
-
-
Chen, Z.1
Yang, H.2
Pavletich, N.P.3
-
15
-
-
78049378633
-
Modeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments
-
Saladin, A., Amourda, C., Poulain, P., Feey, N., Baaden, M., Zacharias, M., Delalande, O. and Preost, C. (2010) Modeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments. Nucleic Acids Res., 38, 6313-6323.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 6313-6323
-
-
Saladin, A.1
Amourda, C.2
Poulain, P.3
Feey, N.4
Baaden, M.5
Zacharias, M.6
Delalande, O.7
Preost, C.8
-
16
-
-
3142653230
-
Geometry of the DNA strands within the RecA nucleofilament: Role in homologous recombination
-
DOI 10.1017/S0033583504003956
-
Preost, C. and Takahashi, M. (2003) Geometry of the DNA strands within the RecA nucleofilament: role in homologous recombination. Q. Rev. Biophys., 36, 429-453. (Pubitemid 38902195)
-
(2003)
Quarterly Reviews of Biophysics
, vol.36
, Issue.4
, pp. 429-453
-
-
Prevost, C.1
Takahashi, M.2
-
17
-
-
33747171129
-
Direct evaluation of a kinetic model for RecA-mediated DNA-strand exchange: The importance of nucleic acid dynamics and entropy during homologous genetic recombination
-
DOI 10.1002/cbic.200600038
-
Xiao, J., Lee, A.M. and Singleton, S.F. (2006) Direct evaluation of a kinetic model for RecA-mediated DNA-strand exchange: the importance of nucleic acid dynamics and entropy during homologous genetic recombination. Chembiochem, 7, 1265-1278. (Pubitemid 44230851)
-
(2006)
ChemBioChem
, vol.7
, Issue.8
, pp. 1265-1278
-
-
Xiao, J.1
Lee, A.M.2
Singleton, S.F.3
-
18
-
-
0030584084
-
Human Rad51 protein promotes ATP-dependent homologous pairing and strand transfer reactions in vitro
-
DOI 10.1016/S0092-8674(00)81394-X
-
Baumann, P., Benson, F.E. and West, S.C. (1996) Human Rad51 protein promotes ATP-dependent homologous pairing and strand transfer reactions in vitro. Cell, 87, 757-766. (Pubitemid 26386948)
-
(1996)
Cell
, vol.87
, Issue.4
, pp. 757-766
-
-
Baumann, P.1
Benson, F.E.2
West, S.C.3
-
19
-
-
0031029556
-
Activities of human recombination protein Rad51
-
DOI 10.1073/pnas.94.2.463
-
Gupta, R.C., Bazemore, L.R., Golub, E.I. and Radding, C.M. (1997) Activities of human recombination protein Rad51. Proc. Natl Acad. Sci. USA, 94, 463-468. (Pubitemid 27053656)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.2
, pp. 463-468
-
-
Gupta, R.C.1
Bazemore, L.R.2
Golub, E.I.3
Radding, C.M.4
-
21
-
-
28844505344
-
Calcium ion promotes yeast Dmc1 activity via formation of long and fine helical filaments with single-stranded DNA
-
DOI 10.1074/jbc.M505896200
-
Lee, M.H., Chang, Y.C., Hong, E.L., Grubb, J., Chang, C.S., Bishop, D.K. and Wang, T.F. (2005) Calcium ion promotes yeast Dmc1 activity via formation of long and fine helical filaments with single-stranded DNA. J. Biol. Chem., 280, 40980-40984. (Pubitemid 41780593)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.49
, pp. 40980-40984
-
-
Lee, M.-H.1
Chang, Y.-C.2
Hong, E.L.3
Grubb, J.4
Chang, C.-S.5
Bishop, D.K.6
Wang, T.-F.7
-
22
-
-
33845968081
-
Calcium stiffens archaeal Rad51 recombinase from Methanococcus voltae for homologous recombination
-
DOI 10.1074/jbc.M607785200
-
Qian, X., He, Y., Ma, X., Fodje, M.N., Grochulski, P. and Luo, Y. (2006) Calcium stiffens archaeal Rad51 recombinase from Methanococcus voltae for homologous recombination. J. Biol. Chem., 281, 39380-39387. (Pubitemid 46041897)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.51
, pp. 39380-39387
-
-
Qian, X.1
He, Y.2
Xinfeng, Ma.3
Fodje, M.N.4
Grochulski, P.5
Luo, Y.6
-
23
-
-
37549051303
-
Real-time measurements of the nucleation, growth and dissociation of single Rad51-DNA nucleoprotein filaments
-
Mine, J., Disseau, L., Takahashi, M., Cappello, G., Dutreix, M. and Viovy, J.-L. (2007) Real-time measurements of the nucleation, growth and dissociation of single Rad51-DNA nucleoprotein filaments. Nucleic Acids Res., 35, 7171-7187.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 7171-7187
-
-
Mine, J.1
Disseau, L.2
Takahashi, M.3
Cappello, G.4
Dutreix, M.5
Viovy, J.-L.6
-
24
-
-
20844461121
-
Human Rad51 filaments on double- and single-stranded DNA: Correlating regular and irregular forms with recombination function
-
DOI 10.1093/nar/gki640
-
Ristic, D., Modesti, M., Van der Heijden, T., Van Noort, J., Dekker, C., Kanaar, R. and Wyman, C. (2005) Human Rad51 filaments on double-and single-stranded DNA: correlating regular and irregular forms with recombination function. Nucleic Acids Res., 33, 3292-3302. (Pubitemid 41194473)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.10
, pp. 3292-3302
-
-
Ristic, D.1
Modesti, M.2
Van Der Heijden, T.3
Van Noort, J.4
Dekker, C.5
Kanaar, R.6
Wyman, C.7
-
25
-
-
0017873807
-
Base stacking in a fluorescent dinucleoside monophosphate: εApεA
-
DOI 10.1002/bip.1978.360170519
-
Baker, B.M., Vanderkool, J. and Kallenbach, N.R. (1978) Base stacking in A fluorescent dinucleoside monophosphate: eApeA. Biopolymers, 17, 1361-1372. (Pubitemid 8326937)
-
(1978)
Biopolymers
, vol.17
, Issue.5
, pp. 1361-1372
-
-
Baker, B.M.1
Vanderkooi, J.2
Kallenbach, N.R.3
-
26
-
-
0016206255
-
Chloroacetaldehyde-modified dinucleoside phosphates. Dynamic fluorescence quenching and quenching due to intramolecular complexation
-
Tolman, G.L., Barrio, J.R. and Leonard, N.J. (1974) Chloroacetaldehyde- modified dinucleoside phosphates. Dynamic fluorescence quenching and quenching due to intramolecular complexation. Biochemistry, 13, 4869-4878.
-
(1974)
Biochemistry
, vol.13
, pp. 4869-4878
-
-
Tolman, G.L.1
Barrio, J.R.2
Leonard, N.J.3
-
27
-
-
0020997753
-
Binding of RecA protein to single-stranded nucleic acids: Spectroscopic studies using fluorescent polynucleotides
-
Cazenave, C., Toulme, J.J. and Helène, C. (1983) Binding of RecA protein to single-stranded nucleic acids: spectroscopic studies using fluorescent polynucleotides. EMBO J., 2, 2247-2251.
-
(1983)
EMBO J.
, vol.2
, pp. 2247-2251
-
-
Cazenave, C.1
Toulme, J.J.2
Helène, C.3
-
28
-
-
0025955453
-
Cofactor-induced orientation of the DNA bases in single-stranded DNA complexed with RecA protein: A fluorescence anisotropy and time-decay study
-
Chabbert, M., Lami, H. and Takahashi, M. (1991) Cofactor-induced orientation of the DNA bases in single-stranded DNA complexed with RecA protein. A fluorescence anisotropy and time-decay study. J. Biol. Chem., 266, 5395-5400. (Pubitemid 21909506)
-
(1991)
Journal of Biological Chemistry
, vol.266
, Issue.9
, pp. 5395-5400
-
-
Chabbert, M.1
Lami, H.2
Takahashi, M.3
-
29
-
-
33745628345
-
Roles of the human Rad51 L1 and L2 loops in DNA binding
-
DOI 10.1111/j.1742-4658.2006.05323.x
-
Matsuo, Y., Sakane, I., Takizawa, Y., Takahashi, M. and Kurumizaka, H. (2006) Roles of the human Rad51 L1 and L2 loops in DNA binding. FEBS J., 273, 3148-3159. (Pubitemid 43990920)
-
(2006)
FEBS Journal
, vol.273
, Issue.14
, pp. 3148-3159
-
-
Matsuo, Y.1
Sakane, I.2
Takizawa, Y.3
Takahashi, M.4
Kurumizaka, H.5
-
30
-
-
69449083857
-
Structure of human Rad51 protein filament from molecular modeling and site-specific linear dichroism spectroscopy
-
Reymer, A., Frykholm, K., Morimatsu, K., Takahashi, M. and Norde, B. (2009) Structure of human Rad51 protein filament from molecular modeling and site-specific linear dichroism spectroscopy. Proc. Natl Acad. Sci. USA, 106, 13248-13253.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 13248-13253
-
-
Reymer, A.1
Frykholm, K.2
Morimatsu, K.3
Takahashi, M.4
Norde, B.5
-
31
-
-
4143068081
-
Crystal structure of archaeal recombinase RadA: A snapshot of its extended conformation
-
DOI 10.1016/j.molcel.2004.07.014, PII S1097276504004368
-
Wu, Y., He, Y., Moya, I.A., Qian, X. and Luo, Y. (2004) Crystal structure of archaeal recombinase RADA: a snapshot of its extended conformation. Mol. Cell, 15, 423-435. (Pubitemid 39092758)
-
(2004)
Molecular Cell
, vol.15
, Issue.3
, pp. 423-435
-
-
Wu, Y.1
He, Y.2
Moya, I.A.3
Qian, X.4
Luo, Y.5
-
32
-
-
0026560451
-
Linear dichroism spectroscopy of nucleic acids
-
Norde, B., Kubista, M. and Kuruscev, T. (1992) Linear dichroism spectroscopy of nucleic acids. Quart. Rev. Biophys., 25, 51-170.
-
(1992)
Quart. Rev. Biophys.
, vol.25
, pp. 51-170
-
-
Norde, B.1
Kubista, M.2
Kuruscev, T.3
-
33
-
-
78650655986
-
Linear dichroism and circular dichroism: A textbook on polarized light spectroscopy
-
Cambridge, UK
-
Norde, B., Rodger, A. and Dafforn, T. (2010) Linear Dichroism and Circular Dichroism: A Textbook on Polarized Light Spectroscopy. The Royal Society of Chemistry, Cambridge, UK.
-
(2010)
The Royal Society of Chemistry
-
-
Norde, B.1
Rodger, A.2
Dafforn, T.3
-
34
-
-
0037015051
-
Arrangement of RecA protein in its active filament determined by polarized-light spectroscopy
-
DOI 10.1073/pnas.142404499
-
Morimatsu, K., Takahashi, M. and Norde, B. (2002) Arrangement of RecA protein in its active filament determined by polarized-light spectroscopy. Proc. Natl Acad. Sci. USA, 99, 11688-11693. (Pubitemid 34994460)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.18
, pp. 11688-11693
-
-
Morimatsu, K.1
Takahashi, M.2
Norden, B.3
-
35
-
-
0023655315
-
Linear dichroism study of RecA-DNA complexes. Structural evidence and binding stoichiometries
-
Takahashi, M., Kubista, M. and Norde, B. (1987) Linear dichroism study of RecA-DNA complexes. Structural evidence and binding stoichiometries. J. Biol. Chem., 262, 8109-8111.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 8109-8111
-
-
Takahashi, M.1
Kubista, M.2
Norde, B.3
-
36
-
-
0026448320
-
Structure of RecA-DNA complexes studied by combination of linear dichroism and small-angle neutron scattering measurements on flow-oriented samples
-
Norde, B., Elvingson, C., Kubista, M., Sjoberg, B., Ryberg, H., Ryberg, M., Mortensen, K. and Takahashi, M. (1992) Structure of RecA-DNA complexes studied by combination of linear dichroism and small-angle neutron scattering measurements on flow-oriented samples. J. Mol. Biol., 226, 1175-1191.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 1175-1191
-
-
Norde, B.1
Elvingson, C.2
Kubista, M.3
Sjoberg, B.4
Ryberg, H.5
Ryberg, M.6
Mortensen, K.7
Takahashi, M.8
-
37
-
-
0023661673
-
Kinetic studies of recA protein binding to a fluorescent single-stranded polynucleotide
-
Chabbert, M., Cazenave, C. and Helène, C. (1987) Kinetic studies of recA protein binding to a fluorescent single-stranded polynucleotide. Biochemistry, 26, 2218-2225.
-
(1987)
Biochemistry
, vol.26
, pp. 2218-2225
-
-
Chabbert, M.1
Cazenave, C.2
Helène, C.3
-
38
-
-
0022429092
-
Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation nucleotide cofactors
-
Menetski, J.P. and Kowalczykowski, S.C. (1985) Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation nucleotide cofactors. J. Mol. Biol., 181, 281-295.
-
(1985)
J. Mol. Biol.
, vol.181
, pp. 281-295
-
-
Menetski, J.P.1
Kowalczykowski, S.C.2
-
39
-
-
0036829631
-
ADP stabilizes the human Rad51-single stranded DNA complex and promotes its DNA annealing activity
-
DOI 10.1046/j.1365-2443.2002.00588.x
-
Kim, H.K., Morimatsu, K., Norde, B., Ardhammar, M. and Takahashi, M. (2002) ADP stabilizes the human Rad51-single stranded DNA complex and promotes its DNA annealing activity. Genes Cells, 7, 1125-1134. (Pubitemid 35256334)
-
(2002)
Genes to Cells
, vol.7
, Issue.11
, pp. 1125-1134
-
-
Kim, H.-K.1
Morimatsu, K.2
Norden, B.3
Ardhammar, M.4
Takahashi, M.5
-
40
-
-
0018034008
-
Interaction of tobacco mosaic virus protein with synthetic polynucleotides containing a fluorescent label: Optical properties of poly(A, epsilonA) and poly(C, epsilonC) copolymers and energy migration from the tryptophan to 1, N6-ethenoadenine or 3, N4-etheno
-
Ledneva, R.K., Razjivin, A.P. and Bogdanov, A.A. (1978) Interaction of tobacco mosaic virus protein with synthetic polynucleotides containing a fluorescent label: optical properties of poly(A, epsilonA) and poly(C, epsilonC) copolymers and energy migration from the tryptophan to 1, N6-ethenoadenine or 3, N4-etheno. Nucleic Acids Res., 5, 4225-4243.
-
(1978)
Nucleic Acids Res.
, vol.5
, pp. 4225-4243
-
-
Ledneva, R.K.1
Razjivin, A.P.2
Bogdanov, A.A.3
-
41
-
-
42449098062
-
Inhibition of filament formation of human Rad51 protein by a small peptide derived from the BRC-motif of the BRCA2 protein
-
DOI 10.1111/j.1365-2443.2008.01180.x
-
Nomme, J., Takizawa, Y., Martinez, S.F., Renodon-Cornière, A., Fleury, F., Weigel, P., Yamamoto, K., Kurumizaka, H. and Takahashi, M. (2008) Inhibition of filament formation of human Rad51 protein by a small peptide derived from the BRC-motif of the BRCA2 protein. Genes Cells, 13, 471-481. (Pubitemid 351567048)
-
(2008)
Genes to Cells
, vol.13
, Issue.5
, pp. 471-481
-
-
Nomme, J.1
Takizawa, Y.2
Martinez, S.F.3
Renodon-Corniere, A.4
Fleury, F.5
Weigel, P.6
Yamamoto, K.-I.7
Kurumizaka, H.8
Takahashi, M.9
-
42
-
-
4444221565
-
UCSF Chimera - A visualization system for exploratory research and analysis
-
Pettersen, E.F., Goddard, T.D., Huang, C.C., Couch, G.S., Greenblatt, D.M., Meng, E.C. and Ferrin, T.E. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem., 25, 1605-1612.
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
43
-
-
33748518255
-
Comparison of multiple amber force fields and development of improved protein backbone parameters
-
DOI 10.1002/prot.21123
-
Hornak, V., Abel, R., Okur, A., Strockbine, B., Roitberg, A. and Simmerling, C. (2006) Comparison of multiple amber force fields and development of improved protein backbone parameters. Proteins, 65, 712-725. (Pubitemid 44583220)
-
(2006)
Proteins: Structure, Function and Genetics
, vol.65
, Issue.3
, pp. 712-725
-
-
Hornak, V.1
Abel, R.2
Okur, A.3
Strockbine, B.4
Roitberg, A.5
Simmerling, C.6
-
44
-
-
34547559704
-
PDB2PQR: Expanding and upgrading automated preparation of biomolecular structures for molecular simulations
-
Dolinsky, T.J., Czodrowski, P., Li, H., Nielsen, J.E., Jensen, J.H., Klebe, G. and Baker, N.A. (2007) PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations. Nucleic Acids Res., 35, W522-W525.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Dolinsky, T.J.1
Czodrowski, P.2
Li, H.3
Nielsen, J.E.4
Jensen, J.H.5
Klebe, G.6
Baker, N.A.7
-
45
-
-
0029633186
-
AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules
-
Pearlman, D.A., Case, D.A., Caldwell, J.W., Ross, W.S., Cheatham, T.E., Debolt, S., Ferguson, D., Seibel, G. and Kollman, P. (1995) AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules. Comput. Phys. Commun., 91, 1-41.
-
(1995)
Comput. Phys. Commun.
, vol.91
, pp. 1-41
-
-
Pearlman, D.A.1
Case, D.A.2
Caldwell, J.W.3
Ross, W.S.4
Cheatham, T.E.5
Debolt, S.6
Ferguson, D.7
Seibel, G.8
Kollman, P.9
-
46
-
-
23444454552
-
The Amber biomolecular simulation programs
-
DOI 10.1002/jcc.20290
-
Case, D.A., Cheatham, T.E., Darden, T., Gohlke, H., Luo, R., Merz, K.M., Onufriev, A., Simmerling, C., Wang, B. and Woods, R.J. (2005) The Amber biomolecular simulation programs. J. Comput. Chem., 26, 1668-1688. (Pubitemid 43076180)
-
(2005)
Journal of Computational Chemistry
, vol.26
, Issue.16
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham III, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz Jr., K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
47
-
-
0038647531
-
Ph- and salt-dependent self-assembly of human Rad51 protein analyzed as fluorescence resonance energy transfer between labeled proteins
-
DOI 10.1093/jb/mvg076
-
Yoshioka, K., Yumoto-Yoshioka, Y., Fleury, F. and Takahashi, M. (2003) pH-and salt-dependent self-assembly of human Rad51 protein analyzed as fluorescence resonance energy transfer between labeled proteins. J. Biochem., 133, 593-597. (Pubitemid 36759466)
-
(2003)
Journal of Biochemistry
, vol.133
, Issue.5
, pp. 593-597
-
-
Yoshioka, K.-I.1
Yumoto-Yoshioka, Y.2
Fleury, F.3
Takahashi, M.4
-
48
-
-
0000136275
-
Right-handed triplex formed between peptide nucleic acid PNA-T8 and Poly(dA) shown by linear dichroism and circular dichroism spectroscopy
-
Kim, S.K., Nielsen, P.E., Egholm, M., Buchardt, O., Berg, R.H. and Norde, B. (1993) Right-handed triplex formed between peptide nucleic acid PNA-T8 and Poly(dA) shown by linear dichroism and circular dichroism spectroscopy. J. Am. Chem. Soc., 115, 6477-6481.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 6477-6481
-
-
Kim, S.K.1
Nielsen, P.E.2
Egholm, M.3
Buchardt, O.4
Berg, R.H.5
Norde, B.6
-
49
-
-
0033578401
-
Tyrosine, phenylalanine, and disulfide contributions to the circular dichroism of proteins: Circular dichroism spectra of wild-type and mutant bovine pancreatic trypsin inhibitor
-
Sreerama, N., Manning, M.C., Powers, M.E., Zhang, J.X., Goldenberg, D.P. and Woody, R.W. (1999) Tyrosine, phenylalanine, and disulfide contributions to the circular dichroism of proteins: circular dichroism spectra of wild-type and mutant bovine pancreatic trypsin inhibitor. Biochemistry, 38, 10814-10822.
-
(1999)
Biochemistry
, vol.38
, pp. 10814-10822
-
-
Sreerama, N.1
Manning, M.C.2
Powers, M.E.3
Zhang, J.X.4
Goldenberg, D.P.5
Woody, R.W.6
-
50
-
-
0000481519
-
Electronic transition dipole moments of the 1 p-ethenoadenine chromophore
-
Holme, A., Albinsson, B. and Nordcn, B. (1994) Electronic transition dipole moments of the 1 p-ethenoadenine chromophore. J. Phys. Chem., 94, 13460-13469.
-
(1994)
J. Phys. Chem.
, vol.94
, pp. 13460-13469
-
-
Holme, A.1
Albinsson, B.2
Nordcn, B.3
-
51
-
-
52949150762
-
Structural analysis of the human Rad51 protein-DNA complex filament by tryptophan fluorescence scanning analysis: Transmission of allosteric effects between ATP binding and DNA binding
-
Renodon-Cornière, A., Takizawa, Y., Conilleau, S., Tran, V., Iwai, S., Kurumizaka, H. and Takahashi, M. (2008) Structural analysis of the human Rad51 protein-DNA complex filament by tryptophan fluorescence scanning analysis: transmission of allosteric effects between ATP binding and DNA binding. J. Mol. Biol., 383, 575-587.
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 575-587
-
-
Renodon-Cornière, A.1
Takizawa, Y.2
Conilleau, S.3
Tran, V.4
Iwai, S.5
Kurumizaka, H.6
Takahashi, M.7
-
52
-
-
27144526413
-
Crystal structure of Methanococcus voltae RadA in complex with ADP: Hydrolysis-induced conformational change
-
DOI 10.1021/bi051222i
-
Qian, X., Wu, Y., He, Y. and Luo, Y. (2005) Crystal structure of Methanococcus voltae RadA in complex with ADP: hydrolysis-induced conformational change. Biochemistry, 44, 13753-13761. (Pubitemid 41507456)
-
(2005)
Biochemistry
, vol.44
, Issue.42
, pp. 13753-13761
-
-
Qian, X.1
Wu, Y.2
He, Y.3
Luo, Y.4
-
53
-
-
58849096231
-
Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules
-
Hilario, J., Amitani, I., Baskin, R.J. and Kowalczykowski, S.C. (2009) Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules. Proc. Natl Acad. Sci. USA, 106, 361-368.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 361-368
-
-
Hilario, J.1
Amitani, I.2
Baskin, R.J.3
Kowalczykowski, S.C.4
-
55
-
-
16944363081
-
Ionized intracellular calcium concentration predicts excitotoxic neuronal death: Observations with low-affinity fluorescent calcium indicators
-
Hyrc, K., Handran, S.D., Rothman, S.M. and Goldberg, M.P. (1997) Ionized intracellular calcium concentration predicts excitotoxic neuronal death: observations with low-affinity fluorescent calcium indicators. J. Neurosci., 17, 6669-6677. (Pubitemid 27366619)
-
(1997)
Journal of Neuroscience
, vol.17
, Issue.17
, pp. 6669-6677
-
-
Goldberg, M.P.1
-
56
-
-
0028135040
-
Spatiotemporal dynamics of intracellular [Ca2+]i oscillations during the growth and meiotic maturation of mouse oocytes
-
Carroll, J., Swann, K., Whittingham, D. and Whitaker, M. (1994) Spatiotemporal dynamics of intracellular [Ca2+]i oscillations during the growth and meiotic maturation of mouse oocytes. Development, 120, 3507-3517.
-
(1994)
Development
, vol.120
, pp. 3507-3517
-
-
Carroll, J.1
Swann, K.2
Whittingham, D.3
Whitaker, M.4
-
57
-
-
33644834545
-
Calcium at fertilization and in early development
-
Whitaker, M. (2006) Calcium at fertilization and in early development. Physiol. Rev., 86, 25-88.
-
(2006)
Physiol. Rev.
, vol.86
, pp. 25-88
-
-
Whitaker, M.1
-
58
-
-
79954605020
-
Ikarugamycin induces DNA damage, intracellular calcium increase, p38 MAP kinase activation and apoptosis in HL-60 human promyelocytic leukemia cells
-
Popescu, R., Heiss, E.H., Ferk, F., Peschel, A., Knasmueller, S., Dirsch, V.M., Krupitza, G. and Kopp, B. (2011) Ikarugamycin induces DNA damage, intracellular calcium increase, p38 MAP kinase activation and apoptosis in HL-60 human promyelocytic leukemia cells. Mutat. Res., 709-710, 60-66.
-
(2011)
Mutat. Res.
, vol.709-710
, pp. 60-66
-
-
Popescu, R.1
Heiss, E.H.2
Ferk, F.3
Peschel, A.4
Knasmueller, S.5
Dirsch, V.M.6
Krupitza, G.7
Kopp, B.8
-
59
-
-
0027337880
-
2+ signals
-
Schieven, G.L., Kirihara, J.M., Burg, D.L., Geahlen, R.L. and Ledbetter, J.A. (1993) p72syk tyrosine kinase is activated by oxidizing conditions that induce lymphocyte tyrosine phosphorylation and Ca2+Signals. J. Biol. Chem., 268, 16688-16692. (Pubitemid 23229982)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.22
, pp. 16688-16692
-
-
Schieven, G.L.1
Kirihara, J.M.2
Burg, D.L.3
Geahlen, R.L.4
Ledbetter, J.A.5
-
60
-
-
79953014380
-
Halenaquinone, a chemical compound that specifically inhibits the secondary DNA binding of RAD51
-
Takaku, M., Kainuma, T., Ishida-Takaku, T., Ishigami, S., Suzuki, H., Tashiro, S., Van Soest, R.W., Nakao, Y. and Kurumizaka, H. (2011) Halenaquinone, a chemical compound that specifically inhibits the secondary DNA binding of RAD51. Genes Cells, 16, 427-436.
-
(2011)
Genes Cells
, vol.16
, pp. 427-436
-
-
Takaku, M.1
Kainuma, T.2
Ishida-Takaku, T.3
Ishigami, S.4
Suzuki, H.5
Tashiro, S.6
Van Soest, R.W.7
Nakao, Y.8
Kurumizaka, H.9
-
61
-
-
33748771770
-
Conserved conformation of RecA protein after executing the DNA strand-exchange reaction. A site-specific linear dichroism structure study
-
DOI 10.1021/bi060621q
-
Frykholm, K., Morimatsu, K. and Norde, B. (2006) Conserved conformation of RecA protein after executing the DNA strand-exchange reaction. A site-specific linear dichroism structure study. Biochemistry, 45, 11172-11178. (Pubitemid 44413664)
-
(2006)
Biochemistry
, vol.45
, Issue.37
, pp. 11172-11178
-
-
Frykholm, K.1
Morimatsu, K.2
Norden, B.3
|