Differential proteomic expressions between superior and inferior spikelets of rice in response to varied nitrogen treatments

Australian Journal of Crop Science

Volumn 6, Issue 2, 2012, Pages 316-325

  Zhang, Zhixing ^a   Chen, Jun ^a   Li, Zhong ^a   Chen, Hongfei ^a   Fang, Changxun ^a   Huang, Jinwen ^a   Lin, Wenxiong ^a  

^a Fujian Agricultural and Forestry University   (China)

Author keywords

Grain filling; Proteomics; Rice; Superior and inferior spikelets

Indexed keywords

EID: 84861801797     PISSN: 18352693     EISSN: 18352707     Source Type: Journal    
DOI: None     Document Type: Article

References (54)

1. Ao HJ, Wang SH, Zou YB, Peng SB, Tang QY, Fang YX, Chen Y, Xiao AM, Chen YM, Xiong CM (2008) Study on yield stability and dry matter characteristics of super hybrid rice. Sci Agr Sin. 41:1927-1936.
2. Becraft PW, Asuncion-Crabb Y (2000) Positional cues specify and maintain aleurone cell fate in maize endosperm development. Development 127:4039-4048.
3. Caspar T, Huber SC, Somerville C (1985) Alterations in growth, photosynthesis, and respiration in a starchless mutant of Arabidopsis thaliana (L.) deficient in chloroplast phosphoglucomutase activity. Plant Physiol. 79:11-17.
4. Choudhury NH, Juliano BO (1980) Lipids in developing and mature rice grain. Phytochemistry 19:1063-1069.
5. Craig KL, Tyers M (1999) The F-box: a new motif for ubiquitin dependent proteolysis in cell cycle regulation and signal transduction. Prog Biophys Mol Bio. 72:299-328.
6. Fageria NK (2007) Yield physiology of rice. J Plant Nutr. 30:843-879.
7. Fait A, Angelovici R, Less H, Ohad I, Urbanczyk-Wochniak E, Fernie A, Galili G (2006) Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiol. 142:839-854.
8. Flores HE, Filner P. (1985) Polyamine catabolism in higher plants: characterization of pyrroline dehydrogenase. Plant Growth Regul. 3:277-291.
9. Fritzius T, Aeschbacher R, Wiemken A, Wingler A (2001) Induction of ApL3 expression by trehalose complements the starch-deficient Arabidopsis mutant adg2-1. lacking ApL1, the large subunit of ADP-glucose pyrophosphorylase. Plant Physiol. 126:883-889.
10. Garrels J (1983) Quantitative two-dimensional gel electrophoresis of proteins. Method Enzymol. 100:411-423.
11. Guo YC, Lin WX, Liang YY, Cheng FY, Liang KJ (2002) Physioecological studies on dry matter production and yield formation in new plant type (NPT) rice: I. Dry matter production and grain-filling characteristics in NPT rice. J Fujian Agric Univ. 31:418-422.
12. Gutierrez L, Wuytswinkel OV, Castelain M, Bellini C (2007) Combined networks regulating seed maturation. Trends Plant Sci. 12:294-300.
13. Ichihara K, Kobayashi N, Saito K (2003) Lipid synthesis and acyl-CoA synthetase in developing rice seeds. Lipids 38:881-884.
14. Ishimaru T, Hirose T, Matsuda T, Goto A, Takahashi K, Sasaki H, Terao T, Ishii R, Ohsugi R, Yamagishi T (2005) Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): Comparison of caryopses located at different positions in a panicle. Plant Cell Physiol. 46: 620-624.
15. Iwasaki Y, Mae T, Makino A, Ohira K, Ojima K (1992) Nitrogen accumulation in the inferior spikelet of rice ear during ripening. Soil Sci Plant Nutr. 38:517-517.
16. Juan C, Zhong W, Gang C, WangYX, Mo YW (2006) Effects of Various Nitrogen Fertilizer Treatments on Filling and Respiratory Rate of Rice Caryopsis. Chi J Rice Sci. 4:396-400.
17. Kato T, Shinmura D, Taniguchi A (2007) Activities of enzymes for sucrose-starch conversion in developing endosperm of rice and their association with grain filling in extra-heavy panicle types. Plant Prod Sci. 10:442-450.
18. Krishnan S, Dayanandan P (2003) Structural and histochemical studies on grain-filling in the caryopsis of rice (Oryza sativa L.). J Biosci. 28:455-469.
19. Kvaale A, Olsen A (1986) Rates of cell division in developing barley endosperms. Ann Bot. 57:829-833.
20. Leesawatwong M, Jamjod S, Kuo J, Dell B, Rerkasem B (2005) Nitrogen fertilizer increases seed protein and milling quality of rice. Cereal Chem. 82:588-593.
21. Li JJ, Zhang HL, Wang DP, Tang B, Chen C, Zhang DL, Zhang MH, Duan JZ, Xiong HY, Li ZC (2011) Rice Omics and biotechnology in China.Plant Omic J. 4(6):302-317.
22. Liang JS, Zhang JH, Cao XH (2001) Grain sink strength may be related to the poor grain filling of indican/japonica rice (Oryza sativa) hybrids, Physiol. Plantarum 112:470-477.
23. Lin WX, Wu ZQ, Liang YY (1992) Impact of climatic conditiong on the grain-filling properties of hybrid rice. Chi J Agr. 13:4-8.
24. -ΔΔ Ct method. Methods 25:402-408.
25. Ma HH, Fan CL, Zeng PY (2008) The PHD Finger: a Reader of The Histone Code. Prog Biochem Biophys. 35:625-630.
26. Macnicol PK, Jacobsen JV (2001) Regulation of alcohol dehydrogenase gene expression in barley aleurone by gibberellin and abscisic acid. Physiol. Plantarum 111:533-539.
27. Mechin V, Thevenot C, Guilloux ML, Prioul JL, Damerval C (2007) Developmental analysis of maize endosperm proteome suggests a pivotal role for pyruvate orthophosphate dikinase. Plant Physiol.143:1203-1219.
28. Moon J, Parry G., Estelle M (2004) The ubiquitin-proteasome pathway and plant development. Plant Cell 16:3181-3195.
29. Murty PS, Murty KS (1982) Spikelet sterility in relation to nitrogen and carbohydrate contents in rice. Indian J Plant Physiol. 25:40-48.
30. Peng S, Cassman KG, Virmani SS, Sheehy J, Khush GS. (1999) Yield potential trends of tropical rice since the release of IR8 and the challenge of increasing rice yield potential. Crop Sci. 39:1552-1559.
31. Perez CM, Juliano BO, Liboon SP, Alcantara JM, Cassman KG (1996) Effects of late nitrogen fertilizer application on head rice yield, protein content, and grain quality of rice. Cereal Chem 73:556-560.
32. Qiu HM, Wu JC, Yang GQ, Dong B, Li DH (2004) Changes in the uptake function of the rice root to nitrogen, phosphorus and potassium under brown planthopper, Nilaparvata lugens (Stal)(Homoptera: Delphacidae) and pesticide stresses, and effect of pesticides on rice-grain filling in field. Crop Prot. 23:1041-1048.
33. Ramasamy S, Ten Berge H, Purushothaman S (1997) Yield formation in rice in response to drainage and nitrogen application. Field Crop Res. 51:65-82.
34. Rao CS, Lin X, Pike HM, Molotkovsky JG, Brown RE (2004) Glycolipid Transfer Protein Mediated Transfer of Glycosphingolipids between Membranes: A Model for Action Based on Kinetic and Thermodynamic Analyses. Biochemistry 43:13805-13815.
35. Ringli C, Keller B, Ryser U (2001) Glycine-rich proteins as structural components of plant cell walls. Cell Mol Life Sci. 58:1430-1441.
36. Sun CX, Palmqvist S, Olsson H, Boren M, Ahlandsberg S, Jansson C (2003) A novel WRKY transcription factor, SUSIBA2, participates in sugar signaling in barley by binding to the sugar-responsive elements of the iso1 promoter. Plant Cell 15:2076-2092.
37. Tang T, Xie H, Wang YX, Lu B, Liang JS (2009) The effect of sucrose and abscisic acid interaction on sucrose synthase and its relationship to grain filling of rice (Oryza sativa L.). J Exp Bot. 60 2641-2652.
38. Tetlow IJ (2006) Understanding storage starch biosynthesis in plants: a means to quality improvement. Botany 84:1167-1185.
39. Umemoto T, Nakamura Y, Ishikura N (1994) Effect of grain location on the panicle on activities involved in starch synthesis in rice endosperm. Phytochemistry 36:843-847.
40. Wang HB, Zhang ZX, Li H, He HB, Fang CX, Zhang AJ, Li QS, Chen RH, Guo XK, Lin H, Wu LK, Lin S, Chen T, Lin RY, Peng XX, Lin WX. (2011) Characterization of Metaproteomics in Crop Rhizospheric Soil. J Proteome Res. 10(3):932-940.
41. Wopereis PM., Watanabe H, Moreira J, Wopereis M (2002) Effect of late nitrogen application on rice yield, grain quality and profitability in the Senegal River valley. Eur J Agron. 17:191-198.
42. Wu C, Shao GJ, Lu WY, Ma LJ, Cui XF, Cao P., Hou XY (2007) Genetic Analysis of Grain Filling Rate in Different Growth Stages of Superior and Inferior Grains in Rice. Sci Agr Sin. 40:1135-1141.
43. Xie Z, Zhang ZL, Zou X, Yang GX, Komatsu S, Shen Q. (2006) Interactions of two abscisic-acid induced WRKY genes in repressing gibberellin signaling in aleurone cells. Plant J. 46:231-242.
44. Xu SB, Li T., Deng ZY, Chong K, Xue YB, Wang T (2008) Dynamic proteomic analysis reveals a switch between central carbon metabolism and alcoholic fermentation in rice filling grains. Plant physiol. 148:908-925.
45. Yang JC, Peng SB, Zhang ZJ, Wang ZQ, Visperas RM, Zhu QS (2002) Grain and dry matter yields and partitioning of assimilates in japonica/indica hybrid rice. Crop Sci. 42:766-772.
46. Yang JC, Zhang JH (2010) Grain-filling problem in'super'rice. J Exp Bot. 61:1-5.
47. Yang JC, Zhang JH, Wang ZQ, Liu K, Wang P (2006) Post-anthesis development of inferior and superior spikelets in rice in relation to abscisic acid and ethylene. J Exp Bot. 57:149-160.
48. Yang JC, Zhang JH, Wang ZQ, Zhu QS (2003) Hormones in the grains in relation to sink strength and postanthesis development of spikelets in rice. Plant Growth Regul. 41:185-195.
49. Yang JC, Zhang JH, Wang ZQ, Zhu QS, Wang W. (2001) Hormonal changes in the grains of rice subjected to water stress during grain filling. Plant physiol. 127:315-323.
50. Zhang H, Li HW, Yuan LM, Wang ZQ, Yang JC, Zhang JH (2011) Post-anthesis alternate wetting and moderate soil drying enhances activities of key enzymes in sucrose-to-starch conversion in inferior spikelets of rice. J Exp Bot.doi: 10.1093/jxb/err263
51. Zhang H., Tan GL, Yang LN, Yang JC, Zhang JH, Zhao BH (2009) Hormones in the grains and roots in relation to post-anthesis development of inferior and superior spikelets in japonica/indica hybrid rice. Plant Physiol Bioch. 47:195-204.
52. Zhang LM, Lin S, Bouman B, Xue CY, Wei FT, Tao HB, Yang XG, Wang HQ, Zhao DL, Dittert K (2009) Response of aerobic rice growth and grain yield to N fertilizer at two contrasting sites near Beijing, China. Field Crop Res. 114:45-53.
53. Zhang ZX, Li Z, Chen J, Li QS, Chen LH, Chen HF, Huang JW, Lin WX (2011) Effects of Nitrogen Management on Protein Expression of Flag Leaves during Grain-Filling Period in Large Panicle Rice (Oryza sativa L.). Acta Agron Sin. 37(5):842-854.
54. Zhu QS, Cao XZ, Luo YQ (1988) Growth analysis on the process of grain filling in rice. Acta Agron Sin. 14:182-192