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Volumn 29, Issue 5, 2010, Pages 65-73

Phylogenetic diversity of bacteria associated with the marine sponge Agelas robusta from South China Sea

Author keywords

Agelas robusta; Phylogenetic diversity; South China Sea; Sponge specific bacteria

Indexed keywords

ACIDOBACTERIA; ACTINOBACTERIA; AGELAS; ANTHOZOA; BACTERIA (MICROORGANISMS); BACTEROIDETES; CHLOROFLEXI; CHLOROFLEXI (CLASS); CYANOBACTERIA; FIRMICUTES; GEMMATIMONADETES; OTUS; PLANCTOMYCETES; PROTEOBACTERIA; SYNECHOCOCCUS;

EID: 84861733172     PISSN: 0253505X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s13131-010-0064-5     Document Type: Article
Times cited : (2)

References (46)
  • 1
    • 33646547894 scopus 로고    scopus 로고
    • Characterization of a culturable alphaproteobacterial symbiont common to many marine sponges and evidence for vertical transmission via sponge larvae
    • Enticknap JJ, Kelly M, Peraud O, et al. 2006. Characterization of a culturable alphaproteobacterial symbiont common to many marine sponges and evidence for vertical transmission via sponge larvae. Appl Environ Microbiol, 72: 3724-3732
    • (2006) Appl Environ Microbiol , vol.72 , pp. 3724-3732
    • Enticknap, J.J.1    Kelly, M.2    Peraud, O.3
  • 2
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39: 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 3
    • 2942620063 scopus 로고    scopus 로고
    • Discovery of the novel candidate phylum "Poribacteria" in marine sponges
    • Fieseler L, Horn M, Wagner M, et al. 2004. Discovery of the novel candidate phylum "Poribacteria" in marine sponges. Appl Environ Microbiol, 70: 3724- 3732
    • (2004) Appl Environ Microbiol , vol.70 , pp. 3724-3732
    • Fieseler, L.1    Horn, M.2    Wagner, M.3
  • 4
    • 0037545904 scopus 로고    scopus 로고
    • Cladespecific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Se
    • Fuller NJ, Marie D, Partensky F, et al. 2003. Cladespecific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Appl Environ Microbiol, 69: 2430-2443
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2430-2443
    • Fuller, N.J.1    Marie, D.2    Partensky, F.3
  • 5
    • 58849131910 scopus 로고    scopus 로고
    • Characterization of antifungal chitinase from marine Streptomyces sp. DA11 associated with South China Sea sponge Craniella australiensis
    • Han Yue, Yang Bingjie, Zhang Fengli, et al. 2009. Characterization of antifungal chitinase from marine Streptomyces sp. DA11 associated with South China Sea sponge Craniella australiensis. Mar Biotechnol (NY), 11: 132-140
    • (2009) Mar Biotechnol (NY) , vol.11 , pp. 132-140
    • Han, Y.1    Yang, B.2    Zhang, F.3
  • 6
    • 66249094562 scopus 로고    scopus 로고
    • Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters
    • HardoimCC, Costa R, Araujo FV, et al. 2009. Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters. Appl Environ Microbiol, 75: 3331-3343
    • (2009) Appl Environ Microbiol , vol.75 , pp. 3331-3343
    • Hardoim, C.C.1    Costa, R.2    Araujo, F.V.3
  • 8
    • 0036729439 scopus 로고    scopus 로고
    • Molecular evidence for a uniform microbial community in sponges from different oceans
    • Hentschel U, Hopke J, Horn M, et al. 2002. Molecular evidence for a uniform microbial community in sponges from different oceans. Appl Environ Microbiol, 68: 4431-4440
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4431-4440
    • Hentschel, U.1    Hopke, J.2    Horn, M.3
  • 9
    • 0035062712 scopus 로고    scopus 로고
    • Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicol
    • Hentschel U, Schmid M, Wagner M, et al. 2001. Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicola. FEMS Microbiol Ecol, 35: 305-312
    • (2001) FEMS Microbiol Ecol , vol.35 , pp. 305-312
    • Hentschel, U.1    Schmid, M.2    Wagner, M.3
  • 11
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz P, GoebelBM, Pace NR. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. JBacteriol, 180: 4765-4774
    • (1998) JBacteriol , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 12
    • 0031054730 scopus 로고    scopus 로고
    • New anticancer antibiotics pelagiomicins, produced by a new marine bacterium Pelagiobacter variabilis
    • Imamura N, Nishijima M, Takadera T, et al. 1997. New anticancer antibiotics pelagiomicins, produced by a new marine bacterium Pelagiobacter variabilis. JAntibiot (Tokyo), 50: 8-12
    • (1997) JAntibiot (Tokyo) , vol.50 , pp. 8-12
    • Imamura, N.1    Nishijima, M.2    Takadera, T.3
  • 13
    • 53149127234 scopus 로고    scopus 로고
    • Insight into the microbial community structure of a Norwegian deep-water coral reef environment
    • Jensen S, Neufeld JD, Birkeland NK, et al. 2008. Insight into the microbial community structure of a Norwegian deep-water coral reef environment. Deep Sea Res, 55: 1554-1563
    • (2008) Deep Sea Res , vol.55 , pp. 1554-1563
    • Jensen, S.1    Neufeld, J.D.2    Birkeland, N.K.3
  • 14
    • 34848927561 scopus 로고    scopus 로고
    • Diversity of culturable actinobacteria isolated from marine sponge Haliclona sp
    • Jiang Shumei, Sun Wei, Chen Minjie, et al. 2007. Diversity of culturable actinobacteria isolated from marine sponge Haliclona sp. Antonie Van Leeuwenhoek, 92: 405-416
    • (2007) Antonie Van Leeuwenhoek , vol.92 , pp. 405-416
    • Jiang, S.1    Sun, W.2    Chen, M.3
  • 15
    • 4944236083 scopus 로고    scopus 로고
    • Ecological studies on Prochlorococcus in the China Seas
    • Jiao Nianzhi, Yang Yanhui. 2002. Ecological studies on Prochlorococcus in the China Seas. Chinese Sci Bull, 47: 1243-1250
    • (2002) Chinese Sci Bull , vol.47 , pp. 1243-1250
    • Jiao, N.1    Yang, Y.2
  • 16
    • 44849090313 scopus 로고    scopus 로고
    • Diversity of microbes associated with the marine sponge, Haliclona simulans, isolated from Irish waters and identification of polyketide synthase genes from the sponge metagenome
    • Kennedy J, CodlingCE, JonesBV, et al. 2008. Diversity of microbes associated with the marine sponge, Haliclona simulans, isolated from Irish waters and identification of polyketide synthase genes from the sponge metagenome. Environ Microbiol, 10: 1888- 1902
    • (2008) Environ Microbiol , vol.10 , pp. 1888-1902
    • Kennedy, J.1    Codling, C.E.2    Jones, B.V.3
  • 17
    • 15944395584 scopus 로고    scopus 로고
    • Marine actinomycetes related to the "Salinospora" group from the Great Barrier Reef sponge Pseudoceratina clavat
    • Kim TK, Garson MJ, Fuerst JA. 2005. Marine actinomycetes related to the "Salinospora" group from the Great Barrier Reef sponge Pseudoceratina clavata. Environ Microbiol, 7: 509-518
    • (2005) Environ Microbiol , vol.7 , pp. 509-518
    • Kim, T.K.1    Garson, M.J.2    Fuerst, J.A.3
  • 18
    • 33644964280 scopus 로고    scopus 로고
    • Discovery of a new source of rifamycin antibiotics in marine sponge actinobacteria by phylogenetic prediction
    • Kim TK, Hewavitharana AK, Shaw PN, et al. 2006. Discovery of a new source of rifamycin antibiotics in marine sponge actinobacteria by phylogenetic prediction. Appl Environ Microbiol, 72: 2118-2125
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2118-2125
    • Kim, T.K.1    Hewavitharana, A.K.2    Shaw, P.N.3
  • 19
    • 70349414422 scopus 로고    scopus 로고
    • Evidence for vertical transmission of bacterial symbionts from adult to embryo in the Caribbean sponge Svenzea zeai
    • Lee OO, Chui PY, Wong YH, et al. 2009. Evidence for vertical transmission of bacterial symbionts from adult to embryo in the Caribbean sponge Svenzea zeai. Appl Environ Microbiol, 75: 6147-6156
    • (2009) Appl Environ Microbiol , vol.75 , pp. 6147-6156
    • Lee, O.O.1    Chui, P.Y.2    Wong, Y.H.3
  • 20
    • 66249094531 scopus 로고    scopus 로고
    • Inter- and intra-specific variations of bacterial communities associated with marine sponges from San Juan Island, Washington, USA
    • Lee OO, Wong YH, Qian Peiyuan. 2009. Inter- and intra-specific variations of bacterial communities associated with marine sponges from San Juan Island, Washington, USA. Appl Environ Microbiol, 75: 3513-3521
    • (2009) Appl Environ Microbiol , vol.75 , pp. 3513-3521
    • Lee, O.O.1    Wong, Y.H.2    Qian, P.3
  • 21
    • 0032488780 scopus 로고    scopus 로고
    • Precambrian sponges with cellular structures
    • LiCW, Chen Junyuan, Hua TE. 1998. Precambrian sponges with cellular structures. Science, 279: 879- 882
    • (1998) Science , vol.279 , pp. 879-882
    • Li, C.W.1    Junyuan, C.2    Hua, T.E.3
  • 22
    • 0028795166 scopus 로고
    • Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. Sepedonicus
    • Li Xiang, De Boer SH. 1995. Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus. Phytopathol, 85: 837-842
    • (1995) Phytopathol , vol.85 , pp. 837-842
    • Li Xiang1    De Boer, S.H.2
  • 23
    • 35448964401 scopus 로고    scopus 로고
    • Cultivable bacterial community from South China Sea sponge as revealed by DGGE fingerprinting and 16S rDNA phylogenetic analysis
    • Li Zhiyong, He Liming, Miao Xiaoling. 2007. Cultivable bacterial community from South China Sea sponge as revealed by DGGE fingerprinting and 16S rDNA phylogenetic analysis. Curr Microbiol, 55: 465-472
    • (2007) Curr Microbiol , vol.55 , pp. 465-472
    • Li, Z.1    He, L.2    Miao, X.3
  • 24
    • 33748615414 scopus 로고    scopus 로고
    • Marine sponge Craniella austrialiensis-associated bacterial diversity revelation based on 16S rDNA library and biologically active Actinomycetes screening, phylogenetic analysis
    • Li Zhiyong, Liu Yan. 2006. Marine sponge Craniella austrialiensis- associated bacterial diversity revelation based on 16S rDNA library and biologically active Actinomycetes screening, phylogenetic analysis. Lett Appl Microbiol, 43: 410-416
    • (2006) Lett Appl Microbiol , vol.43 , pp. 410-416
    • Li, Z.1    Liu, Y.2
  • 25
    • 4944251635 scopus 로고    scopus 로고
    • Natural community structure of cyanobacteria in the South China Sea as revealed by rpoC1 gene sequence analysis
    • Ma Ying, Jiao Nianzhi, Zeng Yonghui. 2004. Natural community structure of cyanobacteria in the South China Sea as revealed by rpoC1 gene sequence analysis. Lett Appl Microbiol, 39: 353-358
    • (2004) Lett Appl Microbiol , vol.39 , pp. 353-358
    • Ma, Y.1    Jiao, N.2    Zeng, Y.3
  • 26
    • 46149112822 scopus 로고    scopus 로고
    • Phylogenetic diversity and spatial distribution of the microbial community associated with the Caribbean deep-water sponge Polymastia cf. Corticata by 16S rRNA, aprA, and amoA gene analysis
    • Meyer B, Kuever J. 2008. Phylogenetic diversity and spatial distribution of the microbial community associated with the Caribbean deep-water sponge Polymastia cf. corticata by 16S rRNA, aprA, and amoA gene analysis. Microb Ecol, 56: 306-321
    • (2008) Microb Ecol , vol.56 , pp. 306-321
    • Meyer, B.1    Kuever, J.2
  • 27
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace NR. 1997. Amolecular view of microbial diversity and the biosphere. Science, 276: 734-740
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: Anew method for reconstructing phylogenetic trees
    • Saitou N, Nei M. 1987. The neighbor-joining method: Anew method for reconstructing phylogenetic trees. Mol Bio Evol, 4: 406-425
    • (1987) Mol Bio Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 57449117293 scopus 로고    scopus 로고
    • Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts
    • Schmitt S, Angermeier H, Schiller R, et al. 2008. Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts. Appl Environ Microbiol, 74: 7694-7708
    • (2008) Appl Environ Microbiol , vol.74 , pp. 7694-7708
    • Schmitt, S.1    Angermeier, H.2    Schiller, R.3
  • 30
    • 33846426845 scopus 로고    scopus 로고
    • Vertical transmission of diverse microbes in the tropical sponge Corticium sp
    • Sharp KH, Eam B, Faulkner DJ, et al. 2007. Vertical transmission of diverse microbes in the tropical sponge Corticium sp. Appl Environ Microbiol, 73: 622-629
    • (2007) Appl Environ Microbiol , vol.73 , pp. 622-629
    • Sharp, K.H.1    Eam, B.2    Faulkner, D.J.3
  • 31
    • 9744283395 scopus 로고    scopus 로고
    • Pseudovibrio denitrificans gen. Nov., sp. Nov., a marine, facultatively anaerobic, fermentative bacterium capable of denitrification
    • Shieh WY, Lin YT, Jean WD. 2004. Pseudovibrio denitrificans gen. nov., sp. nov., a marine, facultatively anaerobic, fermentative bacterium capable of denitrification. Int JSyst Evol Microbiol 54: 2307-2312
    • (2004) Int JSyst Evol Microbiol , vol.54 , pp. 2307-2312
    • Shieh, W.Y.1    Lin, Y.T.2    Jean, W.D.3
  • 32
    • 22144472989 scopus 로고    scopus 로고
    • 16S rRNA phylogeny of sponge-associated cyanobacteri
    • Steindler L, Huchon D, Avni A, et al. 2005. 16S rRNA phylogeny of sponge-associated cyanobacteria. Appl Environ Microbiol, 71: 4127-4131
    • (2005) Appl Environ Microbiol , vol.71 , pp. 4127-4131
    • Steindler, L.1    Huchon, D.2    Avni, A.3
  • 33
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, et al. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol, 24: 1596-1599
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3
  • 34
    • 34250733462 scopus 로고    scopus 로고
    • Spongeassociated microorganisms: Evolution, ecology, and biotechnological potential
    • Taylor MW, Radax R, Steger D, et al. 2007. Spongeassociated microorganisms: evolution, ecology, and biotechnological potential. Microbiol Mol Biol Rev, 71: 295-347
    • (2007) Microbiol Mol Biol Rev , vol.71 , pp. 295-347
    • Taylor, M.W.1    Radax, R.2    Steger, D.3
  • 35
    • 33845606325 scopus 로고    scopus 로고
    • Spatial distribution of sponge-associated bacteria in the Mediterranean sponge Tethya aurantium
    • Thiel V, Neulinger SC, Staufenberger T, et al. 2007. Spatial distribution of sponge-associated bacteria in the Mediterranean sponge Tethya aurantium. FEMS Microbiol Ecol, 59: 47-63
    • (2007) FEMS Microbiol Ecol , vol.59 , pp. 47-63
    • Thiel, V.1    Neulinger, S.C.2    Staufenberger, T.3
  • 36
    • 16644401933 scopus 로고    scopus 로고
    • The biogeography and phylogeny of unicellular cyanobacterial symbionts in sponges from Australia and the Mediterranean
    • Usher KM, Fromont J, Sutton DC, et al. 2004. The biogeography and phylogeny of unicellular cyanobacterial symbionts in sponges from Australia and the Mediterranean. Microb Ecol, 48: 167-177
    • (2004) Microb Ecol , vol.48 , pp. 167-177
    • Usher, K.M.1    Fromont, J.2    Sutton, D.C.3
  • 37
    • 0016664580 scopus 로고
    • ́etude en microscopie ́electronique del'association entre bact́eries et spongiaires du genre Verongia (Dictyoceratida)
    • Vacelet J. 1975. ́etude en microscopie ́electronique del'association entre bact́eries et spongiaires du genre Verongia (Dictyoceratida). JMicrosc Biol Cell, 23: 271-288
    • (1975) JMicrosc Biol Cell , vol.23 , pp. 271-288
    • Vacelet, J.1
  • 38
    • 0000393614 scopus 로고
    • Electron microscope study of the association between some sponges and bacteri
    • Vacelet J, Donadey C. 1977. Electron microscope study of the association between some sponges and bacteria. JExp Mar Ecol, 30: 301-314
    • (1977) JExp Mar Ecol , vol.30 , pp. 301-314
    • Vacelet, J.1    Donadey, C.2
  • 39
    • 60749112033 scopus 로고    scopus 로고
    • Microbial communities associated with the invasive Hawaiian sponge Mycale armat
    • Wang Guangyi, Yoon SH, Lefait E. 2009. Microbial communities associated with the invasive Hawaiian sponge Mycale armata. ISME J, 3: 374-377
    • (2009) ISME J , vol.3 , pp. 374-377
    • Guangyi, W.1    Yoon, S.H.2    Lefait, E.3
  • 40
    • 0037154435 scopus 로고    scopus 로고
    • Sequence analysis of 16S rRNA gene of cyanobacteria associated with the marine sponge Mycale (Carmia) hentscheli
    • Webb VL, Maas EW. 2002. Sequence analysis of 16S rRNA gene of cyanobacteria associated with the marine sponge Mycale (Carmia) hentscheli. FEMS Microbiol Lett, 207: 43-47
    • (2002) FEMS Microbiol Lett , vol.207 , pp. 43-47
    • Webb, V.L.1    Maas, E.W.2
  • 41
    • 49449089866 scopus 로고    scopus 로고
    • Temperature thresholds for bacterial symbiosis with a sponge
    • Webster NS, Cobb RE, Negri AP. 2008. Temperature thresholds for bacterial symbiosis with a sponge. ISME J, 2: 830-842
    • (2008) ISME J , vol.2 , pp. 830-842
    • Webster, N.S.1    Cobb, R.E.2    Negri, A.P.3
  • 42
    • 1342311191 scopus 로고    scopus 로고
    • Diverse microbial communities inhabit Antarctic sponges
    • Webster NS, Negri AP, Munro MM, et al. 2004. Diverse microbial communities inhabit Antarctic sponges. Environ Microbiol, 6: 288-300
    • (2004) Environ Microbiol , vol.6 , pp. 288-300
    • Webster, N.S.1    Negri, A.P.2    Munro, M.M.3
  • 43
    • 0035158608 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile
    • Webster NS, Wilson KJ, Blackall LL, et al. 2001. Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile. Appl Environ Microbiol, 67: 434-444
    • (2001) Appl Environ Microbiol , vol.67 , pp. 434-444
    • Webster, N.S.1    Wilson, K.J.2    Blackall, L.L.3
  • 44
    • 33645027091 scopus 로고    scopus 로고
    • Bacterial diversity in the breadcrumb sponge Halichondria panicea (Pallas)
    • Wichels A, Wurtz S, Dopke H, et al. 2006. Bacterial diversity in the breadcrumb sponge Halichondria panicea (Pallas). FEMS Microbiol Ecol, 56: 102-118
    • (2006) FEMS Microbiol Ecol , vol.56 , pp. 102-118
    • Wichels, A.1    Wurtz, S.2    Dopke, H.3
  • 45
    • 63449139007 scopus 로고    scopus 로고
    • The screening of antimicrobial bacteria with diverse novel nonribosomal peptide synthetase (NRPS) genes from South China sea sponges
    • Zhang Wei, Li Zhiyong, Miao Xiaoling, et al. 2009. The screening of antimicrobial bacteria with diverse novel nonribosomal peptide synthetase (NRPS) genes from South China sea sponges. Mar Biotechnol (NY), 11: 346-355
    • (2009) Mar Biotechnol (NY) , vol.11 , pp. 346-355
    • Zhang, W.1    Li, Z.2    Miao, X.3
  • 46
    • 0042567238 scopus 로고    scopus 로고
    • Biopotentials of marine sponges from China oceans: Past and future
    • Zhang Wei, Xue Song, Zhao Quanyu, et al. 2003. Biopotentials of marine sponges from China oceans: Past and future. Biomol Eng, 20: 413-419
    • (2003) Biomol Eng , vol.20 , pp. 413-419
    • Zhang, W.1    Xue, S.2    Zhao, Q.3


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