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Volumn 65, Issue 5, 2012, Pages 249-253

Actinoplanes rishiriensis sp. nov., a novel motile actinomycete isolated by rehydration and centrifugation method

Author keywords

Actinoplanes; motile actinomycetes; polyphasic taxonomy

Indexed keywords

AMINE; CARDIOLIPIN; DIAMINOPIMELIC ACID; FATTY ACID; GALACTOSE; GLUCOSE; MANNOSE; MENAQUINONE; PHOSPHATIDYL N METHYLETHYLETHANOLAMINE; PHOSPHATIDYLETHANOLAMINE; RNA 16S; UNCLASSIFIED DRUG;

EID: 84861607174     PISSN: 00218820     EISSN: 18811469     Source Type: Journal    
DOI: 10.1038/ja.2012.8     Document Type: Article
Times cited : (7)

References (42)
  • 1
    • 0025139106 scopus 로고
    • Numerical and chemical classification of Actinoplanes and some related actinomycetes
    • Goodfellow, M., Stanton, L. J., Simpson, K. E. & Minnikin, D. E. Numerical and chemical classification of Actinoplanes and some related actinomycetes. J. Gen. Microbiol. 136, 19-36 (1990).
    • (1990) J. Gen. Microbiol. , vol.136 , pp. 19-36
    • Goodfellow, M.1    Stanton, L.J.2    Simpson, K.E.3    Minnikin, D.E.4
  • 2
    • 0002791944 scopus 로고
    • Actinoplanes a new genus of the Actinomycetales
    • Couch,J.N.Actinoplanes, a new genus of the Actinomycetales. J. Elisha Mitchell Sci. Soc. 66, 87-92 (1950).
    • (1950) J. Elisha Mitchell Sci. Soc. , vol.66 , pp. 87-92
    • Couch, J.N.1
  • 3
    • 0023132737 scopus 로고
    • Union of the genera actinoplanes couch ampullariella couch, and amorphosporangium couch in a redefined genus actinoplanes
    • Stackebrandt, E. & Kroppenstedt, R. M. Union of the genera Actinoplanes Couch, Ampullariella Couch, and Amorphosporangium Couch in a redefined genus Actinoplanes. Syst. Appl. Microbiol. 9, 110-114 (1987).
    • (1987) Syst. Appl. Microbiol. , vol.9 , pp. 110-114
    • Stackebrandt, E.1    Kroppenstedt, R.M.2
  • 4
    • 84861604095 scopus 로고
    • Ray fungi and related organisms, actinomycetales izdatel'stvo akademii nauk sssr
    • Krassil'nikov, N. A. Ray fungi and related organisms, Actinomycetales (Izdatel'stvo Akademii Nauk SSSR, Moscow, 1938).
    • (1938) Moscow
    • Krassil'nikov, N.A.1
  • 5
    • 67651165968 scopus 로고    scopus 로고
    • An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
    • Zhi, X. Y., Li, W. J. & Stackebrandt, E. An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. Int. J. Syst. Evol. Microbiol. 59, 589-608 (2009).
    • (2009) Int. J. Syst. Evol. Microbiol. , vol.59 , pp. 589-608
    • Zhi, X.Y.1    Li, W.J.2    Stackebrandt, E.3
  • 6
    • 77952279882 scopus 로고    scopus 로고
    • The genus Actinoplanes and related genera in The Prokaryotes
    • 3rd edn (eds Dworkin, M. Falkow, S. Rosenberg, E. Schleifer, K. H. & Stackebrandt, E., New York
    • Vobis, G. The genus Actinoplanes and related genera in The Prokaryotes: A Handbook on the Biology of Bacteria 3rd edn, Vol. 3 (eds Dworkin, M. Falkow, S. Rosenberg, E. Schleifer, K. H. & Stackebrandt, E.) 623-653 (Springer, New York, 2006).
    • (2006) Handbook on the Biology of Bacteria , vol.3 , pp. 623-653
    • Vobis, G.1
  • 7
    • 70349097632 scopus 로고    scopus 로고
    • Studies on the isolation and distribution of rare actinomycetes in soil
    • Hayakawa, M. Studies on the isolation and distribution of rare actinomycetes in soil. Actinomycetologica 22, 12-19 (2008).
    • (2008) Actinomycetologica , vol.22 , pp. 12-19
    • Hayakawa, M.1
  • 8
    • 0034526177 scopus 로고    scopus 로고
    • Application of a method incorporating differential centrifugation for selective isolation of motile actinomycetes in soil and plant litter
    • Hayakawa, M., Otoguro, M., Takeuchi, T., Yamazaki, T. & Iimura, Y. Application of a method incorporating differential centrifugation for selective isolation of motile actinomycetes in soil and plant litter. Antonie Van Leeuwenhoek 78, 171-185 (2000).
    • (2000) Antonie Van Leeuwenhoek , vol.78 , pp. 171-185
    • Hayakawa, M.1    Otoguro, M.2    Takeuchi, T.3    Yamazaki, T.4    Iimura, Y.5
  • 9
    • 77950597440 scopus 로고    scopus 로고
    • Actinoplanes toevensis sp. nov. and Actinoplanes tereljensis sp. nov., isolated from Mongolian soil
    • Ara, I., Yamamura, H., Tsetseg, B., Daram, D. & Ando, K. Actinoplanes toevensis sp. nov. and Actinoplanes tereljensis sp. nov., isolated from Mongolian soil. Int. J. Syst. Evol. Microbiol. 60, 919-927 (2010).
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 919-927
    • Ara, I.1    Yamamura, H.2    Tsetseg, B.3    Daram, D.4    Ando, K.5
  • 10
    • 77949389888 scopus 로고    scopus 로고
    • Luteipulveratus mongoliensis gen. nov., sp. nov., an actinobacterial taxon in the family Dermacoccaceae
    • Ara, I., Yamamura, H., Tsetseg, B., Daram, D. & Ando, K. Luteipulveratus mongoliensis gen. nov., sp. nov., an actinobacterial taxon in the family Dermacoccaceae. Int. J. Syst. Evol. Microbiol. 60, 574-579 (2010).
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 574-579
    • Ara, I.1    Yamamura, H.2    Tsetseg, B.3    Daram, D.4    Ando, K.5
  • 11
    • 0017865395 scopus 로고
    • Teichomycins new antibiotics from Actinoplanes teichomyceticus nov sp I Description of the producer strain, fermentation studies and biological properties
    • Parenti, F., Beretta, G., Berti, M. & Arioli, V. Teichomycins, new antibiotics from Actinoplanes teichomyceticus nov. sp. I. Description of the producer strain, fermentation studies and biological properties. J. Antibiot. 31, 276-283 (1978).
    • (1978) J. Antibiot. , Issue.31 , pp. 276-283
    • Parenti, F.1    Beretta, G.2    Berti, M.3    Arioli, V.4
  • 12
    • 0016247273 scopus 로고
    • Purpuromycin a new antibiotic isolated from Actinoplanes ianthinogenes nov. sp
    • Coronelli, C., Pagani, H., Bardone, M. R. & Lancini, G. C. Purpuromycin, a new antibiotic isolated from Actinoplanes ianthinogenes nov. sp. J. Antibiot. 27, 161-168 (1974).
    • (1974) J. Antibiot. , vol.27 , pp. 161-168
    • Coronelli, C.1    Pagani, H.2    Bardone, M.R.3    Lancini, G.C.4
  • 13
    • 0020520812 scopus 로고
    • Mycoplanecins, novel antimycobacterial antibiotics from Actinoplanes awajinensis subsp mycoplanecinus subsp. nov I Taxonomy of producing organism and fermentation
    • Torikata, A. et al. Mycoplanecins, novel antimycobacterial antibiotics from Actinoplanes awajinensis subsp. mycoplanecinus subsp. nov. I. Taxonomy of producing organism and fermentation. J. Antibiot. 36, 957-960 (1983).
    • (1983) J. Antibiot. , Issue.36 , pp. 957-960
    • Torikata, A.1
  • 14
    • 0016680833 scopus 로고
    • Lipiarmycin a new antibiotic from Actinoplanes I Description of the producer strain and fermentation studies
    • Parenti, F., Pagani, H. & Beretta, G. Lipiarmycin, a new antibiotic from Actinoplanes. I. Description of the producer strain and fermentation studies. J. Antibiot. 28, 247-252 (1975).
    • (1975) J. Antibiot. , Issue.28 , pp. 247-252
    • Parenti, F.1    Pagani, H.2    Beretta, G.3
  • 15
    • 17944396821 scopus 로고
    • Xylose isomerase from Actinoplanes missouriensis: Primary structure of the gene and protein
    • Amore, R. & Hollenberg, C. P. Xylose isomerase from Actinoplanes missouriensis: Primary structure of the gene and protein. Nucleic Acids Res. 17, 7515 (1989).
    • (1989) Nucleic Acids Res. , vol.17 , pp. 7515
    • Amore, R.1    Hollenberg, C.P.2
  • 16
    • 0018902824 scopus 로고
    • Purification and properties of glucose isomerase of Actinoplanes missouriensis
    • Gong, C. S., Chen, L. F. & George, T. Purification and properties of glucose isomerase of Actinoplanes missouriensis. Biotechnol. Bioeng. 22, 833-845 (1980).
    • (1980) Biotechnol. Bioeng. , vol.22 , pp. 833-845
    • Gong, C.S.1    Chen, L.F.2    George, T.3
  • 17
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J. et al. EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int. J. Syst. Evol. Microbiol. 57, 2259-2261 (2007).
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 2259-2261
    • Chun, J.1
  • 18
    • 83055170074 scopus 로고    scopus 로고
    • Descriptions of Actinoplanes ianthinogenes nom. rev. and Actinoplanes octamycinicus corrig. comb. nov., nom. Rev
    • Tamura, T., Ishida, Y. & Suzuki, K.-I. Descriptions of Actinoplanes ianthinogenes nom. rev. and Actinoplanes octamycinicus corrig. comb. nov., nom. rev. Int. J. Syst. Evol. Microbiol. 61, 2916-2921 (2011).
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 2916-2921
    • Tamura, T.1    Ishida, Y.2    Suzuki, K.-I.3
  • 19
  • 20
    • 0000770675 scopus 로고
    • Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • Wayne, L. G. et al. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37, 463-464 (1987).
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 463-464
    • Wayne, L.G.1
  • 21
    • 0001633459 scopus 로고
    • Humic acid-vitamin agar, a new medium for the selective isolation of soil actinomycetes
    • Hayakawa, M. & Nonomura, H. Humic acid-vitamin agar, a new medium for the selective isolation of soil actinomycetes. J. Ferment. Technol. 65, 501-509 (1987).
    • (1987) J. Ferment. Technol. , vol.65 , pp. 501-509
    • Hayakawa, M.1    Nonomura, H.2
  • 22
    • 0003086375 scopus 로고
    • Heavy metal resistance and melanoid pigment production in the streptomycete flora of copper-polluted vineyard soils
    • Hayakawa, M., Iino, S. & Nonomura, H. Heavy metal resistance and melanoid pigment production in the streptomycete flora of copper-polluted vineyard soils. J. Ferment. Technol. 60, 1-9 (1982).
    • (1982) J. Ferment. Technol. , vol.60 , pp. 1-9
    • Hayakawa, M.1    Iino, S.2    Nonomura, H.3
  • 23
    • 0002151856 scopus 로고
    • Classification of actinomycete genus Ampullariella from soils of Japan
    • Nonomura, H., Iino, S. & Hayakawa, M. Classification of actinomycete genus Ampullariella from soils of Japan. J. Ferment. Technol. 57, 79-85 (1979).
    • (1979) J. Ferment. Technol. , vol.57 , pp. 79-85
    • Nonomura, H.1    Iino, S.2    Hayakawa, M.3
  • 25
    • 0000601431 scopus 로고
    • Fresh isolates of actinomycetes in which the presence of sporogenous aerial mycelia is a fluctuating characteristic
    • Jones, K. L. Fresh isolates of actinomycetes in which the presence of sporogenous aerial mycelia is a fluctuating characteristic. J. Bacteriol. 57, 141-145 (1949).
    • (1949) J. Bacteriol. , vol.57 , pp. 141-145
    • Jones, K.L.1
  • 26
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling, E. B. & Gottlieb, D. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16, 313-340 (1966).
    • (1966) Int. J. Syst. Bacteriol. , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 27
    • 84876693306 scopus 로고
    • Identification of Nocardia caviae (Erikson) nov. comb
    • Gordon, R. E. & Mihm, J.M. Identification of Nocardia caviae (Erikson) nov. comb. Ann. NY. Acad. Sci. 98, 628-636 (1962).
    • (1962) Ann. N.Y. Acad. Sci. , vol.98 , pp. 628-636
    • Gordon, R.E.1    Mihm, J.M.2
  • 28
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa, T., Takizawa, M. & Tanida, S. A rapid analysis for chemical grouping of aerobic actinomycetes. J. Gen. Appl. Microbiol. 29, 319-322 (1983).
    • (1983) J. Gen. Appl. Microbiol. , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 30
    • 0021182575 scopus 로고
    • An integrated procedure for the extraction of bacterial isoprenoid quinines and polar lipids
    • Minnikin, D. E. et al. An integrated procedure for the extraction of bacterial isoprenoid quinines and polar lipids. J. Microbiol. Methods 2, 233-241 (1984).
    • (1984) J. Microbiol. Methods , vol.2 , pp. 233-241
    • Minnikin, D.E.1
  • 31
    • 79551513212 scopus 로고    scopus 로고
    • Mobilicoccus pelagius gen. nov., sp. nov. and Piscicoccus intestinalis gen. nov., sp. nov., two new members of the family Dermatophilaceae, and reclassification of Dermatophilus chelonae (Masters et al. 1995) as Austwickia chelonae gen. nov., comb. Nov
    • Hamada, M. et al. Mobilicoccus pelagius gen. nov., sp. nov. and Piscicoccus intestinalis gen. nov., sp. nov., two new members of the family Dermatophilaceae, and reclassification of Dermatophilus chelonae (Masters et al. 1995) as Austwickia chelonae gen. nov., comb. nov. J. Gen. Appl. Microbiol. 56, 427-436 (2010).
    • (2010) J. Gen. Appl. Microbiol. , Issue.56 , pp. 427-436
    • Hamada, M.1
  • 32
    • 0027317246 scopus 로고
    • Fatty acid and polar lipid composition of the genus Amycolatopsis: Application of fast atom bombardment-mass spectrometry to structure analysis of underivatized phospholipids
    • Yassin, A. F., Haggenei, B., Budzikiewicz, H. & Schaal, K. P. Fatty acid and polar lipid composition of the genus Amycolatopsis: Application of fast atom bombardment-mass spectrometry to structure analysis of underivatized phospholipids. Int. J. Syst. Bacteriol. 43, 414-420 (1993).
    • (1993) Int. J. Syst. Bacteriol. , vol.43 , pp. 414-420
    • Yassin, A.F.1    Haggenei, B.2    Budzikiewicz, H.3    Schaal, K.P.4
  • 33
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol. Lett. 25, 125-128 (1984).
    • (1984) FEMS Microbiol. Lett. , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 34
    • 50549178319 scopus 로고
    • Preparation of transforming deoxyribonucleic acid by phenol treatment
    • Saito, H. & Miura, K.-I. Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim. Biophys. Acta. 72, 619-629 (1963).
    • (1963) Biochim. Biophys. Acta. , vol.72 , pp. 619-629
    • Saito, H.1    Miura, K.-I.2
  • 35
    • 0141502460 scopus 로고    scopus 로고
    • Taxonomic re-evaluation of whorl-forming Streptomyces (formerly Streptoverticillium) species by using phenotypes, DNA-DNA hybridization and sequences of gyrB, and proposal of Streptomyces luteireticuli (ex Katoh and Arai 1957) corrig., sp. nov., nom. rev
    • Hatano, K., Nishii, T. & Kasai, H. Taxonomic re-evaluation of whorl-forming Streptomyces (formerly Streptoverticillium) species by using phenotypes, DNA-DNA hybridization and sequences of gyrB, and proposal of Streptomyces luteireticuli (ex Katoh and Arai 1957) corrig., sp. nov., nom. rev. Int. J. Syst. Evol. Microbiol. 53, 1519-1529 (2003).
    • (2003) Int. J. Syst. Evol. Microbiol. , vol.53 , pp. 1519-1529
    • Hatano, K.1    Nishii, T.2    Kasai, H.3
  • 36
    • 0035196518 scopus 로고    scopus 로고
    • Phylogenetic analysis of the genus Actinoplanes and transfer of Actinoplanes minutisporangius Ruan et al. 1986 and 'Actinoplanes aurantiacus' to Cryptosporangium minutisporangium comb. nov. and Cryptosporangium aurantiacum sp. Nov
    • Tamura, T. & Hatano, K. Phylogenetic analysis of the genus Actinoplanes and transfer of Actinoplanes minutisporangius Ruan et al. 1986 and 'Actinoplanes aurantiacus' to Cryptosporangium minutisporangium comb. nov. and Cryptosporangium aurantiacum sp. nov. Int. J. Syst. Evol. Microbiol. 51, 2119-2125 (2001).
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 2119-2125
    • Tamura, T.1    Hatano, K.2
  • 37
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL-X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. The CLUSTAL-X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882 (1997).
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 38
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K. et al. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739 (2011).
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1
  • 39
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425 (1987).
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 40
    • 0033854992 scopus 로고    scopus 로고
    • Efficiencies of fast algorithms of phylogenetic inference under the criteria of maximum parsimony, minimum evolution, and maximum likelihood when a large number of sequences are used
    • Takahashi, K. & Nei, M. Efficiencies of fast algorithms of phylogenetic inference under the criteria of maximum parsimony, minimum evolution, and maximum likelihood when a large number of sequences are used. Mol. Biol. Evol. 17, 1251-1258 (2000).
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1251-1258
    • Takahashi, K.1    Nei, M.2
  • 41
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39, 783-791 (1985).
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 42
    • 0025799774 scopus 로고
    • Application of calorimetric microdilution plate hybridization for rapid generic identification of 22 Mycobacterium species
    • Kusunoki, S. et al. Application of calorimetric microdilution plate hybridization for rapid generic identification of 22 Mycobacterium species. J. Clin. Microbiol. 29, 1596-1603 (1991).
    • (1991) J. Clin. Microbiol. , vol.29 , pp. 1596-1603
    • Kusunoki, S.1


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