Inferring epidemic contact structure from phylogenetic trees

PLoS Computational Biology

Volumn 8, Issue 3, 2012, Pages

  Leventhal, Gabriel E ^a   Kouyos, Roger ^b   Stadler, Tanja ^a   von Wyl, Viktor ^c   Yerly, Sabine ^d   Böni, Jürg ^e   Cellerai, Cristina ^f   Klimkait, Thomas ^g   Günthard, Huldrych F ^c   Bonhoeffer, Sebastian ^a  

^a ETH ZURICH   (Switzerland)

^b PRINCETON UNIVERSITY   (United States)

^c UNIVERSITY HOSPITAL ZURICH   (Switzerland)

^d GENEVA UNIVERSITY HOSPITALS   (Switzerland)

^e UNIVERSITY OF ZURICH   (Switzerland)

^f LAUSANNE UNIVERSITY HOSPITAL   (Switzerland)

^g UNIVERSITY OF BASEL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGY; MIXING;

CONTACT NETWORKS; CONTACT STRUCTURE; DISEASE OUTBREAKS; EPIDEMIC SPREADING; GENETIC FINGERPRINTS; NULL MODEL; PATHOGEN POPULATIONS; PHYLOGENETIC TREES; RANDOM MIXING; TREE IMBALANCE;

EPIDEMIOLOGY;

ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; EPIDEMIC; EVOLUTIONARY RATE; GENETIC DIFFERENCE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; MATHEMATICAL COMPUTING; MATHEMATICAL MODEL; PHYLOGENETIC TREE; PROCESS MODEL; SENSITIVITY ANALYSIS; SEQUENCE DATABASE; VIRUS PATHOGENESIS; VIRUS REPLICATION; VIRUS TRANSMISSION; VIRUS VIRULENCE;

EID: 84861162090     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1002413     Document Type: Article

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