-
1
-
-
41949120307
-
A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species
-
Andersen MR, et al. 2008. A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species. Proc. Natl. Acad. Sci. U. S. A. 105:4387-4392.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 4387-4392
-
-
Andersen, M.R.1
-
2
-
-
0001910660
-
The regulation of carbon metabolism in Aspergillus nidulans
-
Smith J, Pateman J (ed), Academic Press, London, United Kingdom
-
Arst HN, Jr., Bailey C. 1977. The regulation of carbon metabolism in Aspergillus nidulans, p 131-146. In Smith J, Pateman J (ed), Genetics and physiology of Aspergillus nidulans. Academic Press, London, United Kingdom.
-
(1977)
Genetics and physiology of Aspergillus nidulans
, pp. 131-146
-
-
Arst Jr., H.N.1
Bailey, C.2
-
3
-
-
79960716430
-
Regulation of pentose utilisation by AraR, but not XlnR, differs in Aspergillus nidulans and Aspergillus niger
-
Battaglia E, et al. 2011. Regulation of pentose utilisation by AraR, but not XlnR, differs in Aspergillus nidulans and Aspergillus niger. Appl. Microbiol. Biotechnol. 91:387-397.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.91
, pp. 387-397
-
-
Battaglia, E.1
-
7
-
-
34547348358
-
Regulation of pentose catabolic pathway genes of Aspergillus niger
-
de Groot M, et al. 2007. Regulation of pentose catabolic pathway genes of Aspergillus niger. Food Technol. Biotechnol. 45:134-138.
-
(2007)
Food Technol. Biotechnol.
, vol.45
, pp. 134-138
-
-
de Groot, M.1
-
9
-
-
0030833910
-
The faeA genes from Aspergillus niger and Aspergillus tubingensis encode ferulic acid esterases involved in degradation of complex cell wall polysaccharides
-
de Vries RP, et al. 1997. The faeA genes from Aspergillus niger and Aspergillus tubingensis encode ferulic acid esterases involved in degradation of complex cell wall polysaccharides. Appl. Environ. Microbiol. 63: 4638-4644.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4638-4644
-
-
de Vries, R.P.1
-
10
-
-
0031909985
-
aguA, the gene encoding an extracellular alpha-glucuronidase from Aspergillus tubingensis, is specifically induced on xylose and not on glucuronic acid
-
de Vries RP, Poulsen CH, Madrid S, Visser J. 1998. aguA, the gene encoding an extracellular alpha-glucuronidase from Aspergillus tubingensis, is specifically induced on xylose and not on glucuronic acid. J. Bacteriol. 180:243-249.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 243-249
-
-
de Vries, R.P.1
Poulsen, C.H.2
Madrid, S.3
Visser, J.4
-
11
-
-
0033050120
-
Differential expression of three alpha-galactosidase genes and a single beta-galactosidase gene from Aspergillus niger
-
de Vries RP, et al. 1999. Differential expression of three alpha-galactosidase genes and a single beta-galactosidase gene from Aspergillus niger. Appl. Environ. Microbiol. 65:2453-2460.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 2453-2460
-
-
de Vries, R.P.1
-
12
-
-
0035199524
-
Aspergillus enzymes involved in degradation of plant cell wall polysaccharides
-
de Vries RP, Visser J. 2001. Aspergillus enzymes involved in degradation of plant cell wall polysaccharides. Microbiol. Mol. Biol. Rev. 65:497-522.
-
(2001)
Microbiol. Mol. Biol. Rev.
, vol.65
, pp. 497-522
-
-
de Vries, R.P.1
Visser, J.2
-
13
-
-
0032731963
-
Regulation of the feruloyl esterase (faeA) gene from Aspergillus niger
-
de Vries RP, Visser J. 1999. Regulation of the feruloyl esterase (faeA) gene from Aspergillus niger. Appl. Environ. Microbiol. 65:5500-5503.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 5500-5503
-
-
de Vries, R.P.1
Visser, J.2
-
14
-
-
0032758304
-
CreA modulates the XlnRinduced expression on xylose of Aspergillus niger genes involved in xylan degradation
-
de Vries RP, Visser J, de Graaff LH. 1999. CreA modulates the XlnRinduced expression on xylose of Aspergillus niger genes involved in xylan degradation. Res. Microbiol. 150:281-285.
-
(1999)
Res. Microbiol.
, vol.150
, pp. 281-285
-
-
de Vries, R.P.1
Visser, J.2
de Graaff, L.H.3
-
15
-
-
0027179822
-
The Aspergillus niger carbon catabolite repressor encoding gene, creA
-
Drysdale MR, Kolze SE, Kelly JM. 1993. The Aspergillus niger carbon catabolite repressor encoding gene, creA. Gene 130:241-245.
-
(1993)
Gene
, vol.130
, pp. 241-245
-
-
Drysdale, M.R.1
Kolze, S.E.2
Kelly, J.M.3
-
17
-
-
33644876020
-
Pfam: clans, web tools and services
-
Finn RD, et al. 2006. Pfam: clans, web tools and services. Nucleic Acids Res. 34:D247-D251.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Finn, R.D.1
-
18
-
-
0027772796
-
Cloning and characterization of the abfB gene coding for the major alpha-L-arabinofuranosidase (ABF B) of Aspergillus niger
-
Flipphi MJ, van Heuvel M, van der Veen P, Visser J, de Graaff LH. 1993. Cloning and characterization of the abfB gene coding for the major alpha-L-arabinofuranosidase (ABF B) of Aspergillus niger. Curr. Genet. 24:525-532.
-
(1993)
Curr. Genet.
, vol.24
, pp. 525-532
-
-
Flipphi, M.J.1
van Heuvel, M.2
van der Veen, P.3
Visser, J.4
de Graaff, L.H.5
-
19
-
-
0032867401
-
Two cellobiohydrolase-encoding genes from Aspergillus niger require D-xylose and the xylanolytic transcriptional activator XlnR for their expression
-
Gielkens MM, Dekkers E, Visser J, de Graaff LH. 1999. Two cellobiohydrolase-encoding genes from Aspergillus niger require D-xylose and the xylanolytic transcriptional activator XlnR for their expression. Appl. Environ. Microbiol. 65:4340-4345.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4340-4345
-
-
Gielkens, M.M.1
Dekkers, E.2
Visser, J.3
de Graaff, L.H.4
-
20
-
-
0031039671
-
Arabinoxylan degradation by fungi: characterization of the arabinoxylan-arabinofuranohydrolase encoding genes from Aspergillus niger and Aspergillus tubingensis
-
Gielkens MM, Visser J, de Graaff LH. 1997. Arabinoxylan degradation by fungi: characterization of the arabinoxylan-arabinofuranohydrolase encoding genes from Aspergillus niger and Aspergillus tubingensis. Curr. Genet. 31:22-29.
-
(1997)
Curr. Genet.
, vol.31
, pp. 22-29
-
-
Gielkens, M.M.1
Visser, J.2
de Graaff, L.H.3
-
21
-
-
0036210984
-
EglC, a new endoglucanase from Aspergillus niger with major activity towards xyloglucan
-
Hasper AA, Dekkers E, van Mil M, van de Vondervoort PJ, de Graaff LH. 2002. EglC, a new endoglucanase from Aspergillus niger with major activity towards xyloglucan. Appl. Environ. Microbiol. 68:1556-1560.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1556-1560
-
-
Hasper, A.A.1
Dekkers, E.2
van Mil, M.3
van de Vondervoort, P.J.4
de Graaff, L.H.5
-
22
-
-
0034115471
-
The Aspergillus niger transcriptional activator XlnR, which is involved in the degradation of the polysaccharides xylan and cellulose, also regulates D-xylose reductase gene expression
-
Hasper AA, Visser J, de Graaff LH. 2000. The Aspergillus niger transcriptional activator XlnR, which is involved in the degradation of the polysaccharides xylan and cellulose, also regulates D-xylose reductase gene expression. Mol. Microbiol. 36:193-200.
-
(2000)
Mol. Microbiol
, vol.36
, pp. 193-200
-
-
Hasper, A.A.1
Visser, J.2
de Graaff, L.H.3
-
23
-
-
21344471138
-
Real-time RT-PCR normalisation; strategies and considerations
-
Huggett J, Dheda K, Bustin S, Zumla A. 2005. Real-time RT-PCR normalisation; strategies and considerations. Genes Immun. 6:279-284.
-
(2005)
Genes Immun
, vol.6
, pp. 279-284
-
-
Huggett, J.1
Dheda, K.2
Bustin, S.3
Zumla, A.4
-
24
-
-
0029035405
-
Cloning of the xynB gene encoding xylanase B from Aspergillus niger and its expression in Aspergillus kawachii
-
Kinoshita K, Takano M, Koseki K, Ito K, Iwano K. 1995. Cloning of the xynB gene encoding xylanase B from Aspergillus niger and its expression in Aspergillus kawachii. J. Ferm. Bioeng. 79:422-428.
-
(1995)
J. Ferm. Bioeng.
, vol.79
, pp. 422-428
-
-
Kinoshita, K.1
Takano, M.2
Koseki, K.3
Ito, K.4
Iwano, K.5
-
25
-
-
80052757522
-
L-Arabitol is the actual inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei) Appl
-
Mach-Aigner AR, Gudynaite-Savitch L, Mach RL. 2011. L-Arabitol is the actual inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei) Appl. Environ. Microbiol. 77:5988-5994.
-
(2011)
Environ. Microbiol.
, vol.77
, pp. 5988-5994
-
-
Mach-Aigner, A.R.1
Gudynaite-Savitch, L.2
Mach, R.L.3
-
26
-
-
77749260577
-
D-Xylose as a repressor or inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei)
-
Mach-Aigner AR, Pucher ME, Mach RL. 2010. D-Xylose as a repressor or inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei). Appl. Environ. Microbiol. 76:1770-1776.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 1770-1776
-
-
Mach-Aigner, A.R.1
Pucher, M.E.2
Mach, R.L.3
-
27
-
-
55049124006
-
Transcriptional regulation of xyr1, encoding the main regulator of the xylanolytic and cellulolytic enzyme system in Hypocrea jecorina
-
Mach-Aigner AR, et al. 2008. Transcriptional regulation of xyr1, encoding the main regulator of the xylanolytic and cellulolytic enzyme system in Hypocrea jecorina. Appl. Environ. Microbiol. 74:6554-6562.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 6554-6562
-
-
Mach-Aigner, A.R.1
-
28
-
-
79957857260
-
Xylose triggers reversible phosphorylation of XlnR, the fungal transcriptional activator of xylanolytic and cellulolytic genes in Aspergillus oryzae
-
Noguchi Y, Tanaka H, Kanamaru K, Kato M, Kobayashi T. 2011. Xylose triggers reversible phosphorylation of XlnR, the fungal transcriptional activator of xylanolytic and cellulolytic genes in Aspergillus oryzae. Biosci. Biotechnol. Biochem. 75:953-959.
-
(2011)
Biosci. Biotechnol. Biochem.
, vol.75
, pp. 953-959
-
-
Noguchi, Y.1
Tanaka, H.2
Kanamaru, K.3
Kato, M.4
Kobayashi, T.5
-
29
-
-
0032922096
-
Carbon catabolite repression of the Aspergillus nidulans xlnA gene
-
Orejas M, MacCabe AP, Perez Gonzalez JA, Kumar S, Ramón D. 1999. Carbon catabolite repression of the Aspergillus nidulans xlnA gene. Mol. Microbiol. 31:177-184.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 177-184
-
-
Orejas, M.1
MacCabe, A.P.2
Perez Gonzalez, J.A.3
Kumar, S.4
Ramón, D.5
-
30
-
-
0035110793
-
The wide-domain carbon catabolite repressor CreA indirectly controls expression of the Aspergillus nidulans xlnB gene, encoding the acidic endobeta-(1,4)-xylanase X(24)
-
Orejas M, MacCabe AP, Perez-Gonzalez JA, Kumar S, Ramon D. 2001. The wide-domain carbon catabolite repressor CreA indirectly controls expression of the Aspergillus nidulans xlnB gene, encoding the acidic endobeta-(1,4)-xylanase X(24). J. Bacteriol. 183:1517-1523.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1517-1523
-
-
Orejas, M.1
MacCabe, A.P.2
Perez-Gonzalez, J.A.3
Kumar, S.4
Ramon, D.5
-
31
-
-
0034142291
-
pgaA and pgaB encode two constitutively expressed endopolygalacturonases of Aspergillus niger
-
Parenicová L, Benen JA, Kester HC, Visser J. 2000. pgaA and pgaB encode two constitutively expressed endopolygalacturonases of Aspergillus niger. Biochem. J. 345:637-644.
-
(2000)
Biochem. J.
, vol.345
, pp. 637-644
-
-
Parenicová, L.1
Benen, J.A.2
Kester, H.C.3
Visser, J.4
-
32
-
-
0344447058
-
Molecular cloning and transcriptional regulation of the Aspergillus nidulans xlnD gene encoding a betaxylosidase
-
Pérez-González JA, et al. 1998. Molecular cloning and transcriptional regulation of the Aspergillus nidulans xlnD gene encoding a betaxylosidase. Appl. Environ. Microbiol. 64:1412-1419.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1412-1419
-
-
Pérez-González, J.A.1
-
33
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29:e45.
-
(2001)
Nucleic Acids Res
, vol.29
-
-
Pfaffl, M.W.1
-
34
-
-
49249124795
-
The genetics of Aspergillus nidulans
-
Pontecorvo G, Roper JA, Hemmons LM, Macdonald KD, Bufton AW. 1953. The genetics of Aspergillus nidulans. Adv. Genet. 5:141-238.
-
(1953)
Adv. Genet.
, vol.5
, pp. 141-238
-
-
Pontecorvo, G.1
Roper, J.A.2
Hemmons, L.M.3
Macdonald, K.D.4
Bufton, A.W.5
-
35
-
-
0042733043
-
Mannitol is required for stress tolerance in Aspergillus niger conidiospores
-
Ruijter GJ, et al. 2003. Mannitol is required for stress tolerance in Aspergillus niger conidiospores. Eukaryot. Cell 2:690-698.
-
(2003)
Eukaryot. Cell
, vol.2
, pp. 690-698
-
-
Ruijter, G.J.1
-
36
-
-
0030875380
-
Isolation of Aspergillus niger creA mutants and effects of the mutations on expression of arabinases and L-arabinose catabolic enzymes
-
Ruijter GJ, Vanhanen SA, Gielkens MM, van de Vondervoort PJ, Visser J. 1997. Isolation of Aspergillus niger creA mutants and effects of the mutations on expression of arabinases and L-arabinose catabolic enzymes. Microbiology 143:2991-2998.
-
(1997)
Microbiology
, vol.143
, pp. 2991-2998
-
-
Ruijter, G.J.1
Vanhanen, S.A.2
Gielkens, M.M.3
van de Vondervoort, P.J.4
Visser, J.5
-
38
-
-
69449092483
-
A single amino acid change (Y318F) in the L-arabitol dehydrogenase (LadA) from Aspergillus niger results in a significant increase in affinity for D-sorbitol
-
Rutten L, Ribot C, Trejo-Aguilar B, Wosten HA, de Vries RP. 2009. A single amino acid change (Y318F) in the L-arabitol dehydrogenase (LadA) from Aspergillus niger results in a significant increase in affinity for D-sorbitol. BMC Microbiol. 9:166.
-
(2009)
BMC Microbiol
, vol.9
, pp. 166
-
-
Rutten, L.1
Ribot, C.2
Trejo-Aguilar, B.3
Wosten, H.A.4
de Vries, R.P.5
-
39
-
-
0000246914
-
Carbon catabolite repression in Aspergillus nidulans: a review
-
Scazzocchio C, et al. 1995. Carbon catabolite repression in Aspergillus nidulans: a review. Can. J. Bot. 73:160-166.
-
(1995)
Can. J. Bot.
, vol.73
, pp. 160-166
-
-
Scazzocchio, C.1
-
40
-
-
33845671822
-
Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina
-
Stricker AR, Grosstessner-Hain K, Würleitner E, Mach RL. 2006. Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina. Eukaryot. Cell 5:2128-2137.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 2128-2137
-
-
Stricker, A.R.1
Grosstessner-Hain, K.2
Würleitner, E.3
Mach, R.L.4
-
41
-
-
38649100624
-
Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei)
-
Stricker AR, Mach RL, de Graaff LH. 2008. Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei). Appl. Microbiol. Biotechnol. 78: 211-220.
-
(2008)
Appl. Microbiol. Biotechnol.
, vol.78
, pp. 211-220
-
-
Stricker, A.R.1
Mach, R.L.2
de Graaff, L.H.3
-
42
-
-
43049168768
-
CreA mediates repression of the regulatory gene xlnR which controls the production of xylanolytic enzymes in Aspergillus nidulans
-
Tamayo EN, et al. 2008. CreA mediates repression of the regulatory gene xlnR which controls the production of xylanolytic enzymes in Aspergillus nidulans. Fungal Genet. Biol. 45:984-993.
-
(2008)
Fungal Genet. Biol.
, vol.45
, pp. 984-993
-
-
Tamayo, E.N.1
-
44
-
-
0034796383
-
The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose
-
vanKuyk PA, de Groot MJ, Ruijter GJ, de Vries RP, Visser J. 2001. The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose. Eur. J. Biochem. 268:5414-5423.
-
(2001)
Eur. J. Biochem.
, vol.268
, pp. 5414-5423
-
-
vanKuyk, P.A.1
de Groot, M.J.2
Ruijter, G.J.3
de Vries, R.P.4
Visser, J.5
-
45
-
-
2342540411
-
Aspergillus niger mstA encodes a high-affinity sugar/H+ symporter which is regulated in response to extracellular pH
-
vanKuyk PA, et al. 2004. Aspergillus niger mstA encodes a high-affinity sugar/H+ symporter which is regulated in response to extracellular pH. Biochem. J. 379:375-383.
-
(2004)
Biochem. J.
, vol.379
, pp. 375-383
-
-
vanKuyk, P.A.1
-
46
-
-
0030934768
-
Beta-xylosidase activity, encoded by xlnD, is essential for complete hydrolysis of xylan by Aspergillus niger but not for induction of the xylanolytic enzyme spectrum
-
van Peij NN, Brinkmann J, Vrsanska M, Visser J, de Graaff LH. 1997. Beta-xylosidase activity, encoded by xlnD, is essential for complete hydrolysis of xylan by Aspergillus niger but not for induction of the xylanolytic enzyme spectrum. Eur. J. Biochem. 245:164-173.
-
(1997)
Eur. J. Biochem.
, vol.245
, pp. 164-173
-
-
van Peij, N.N.1
Brinkmann, J.2
Vrsanska, M.3
Visser, J.4
de Graaff, L.H.5
-
47
-
-
0031660773
-
The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger
-
van Peij NN, Gielkens MM, de Vries RP, Visser J, de Graaff LH. 1998. The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger. Appl. Environ. Microbiol. 64:3615-3619.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3615-3619
-
-
van Peij, N.N.1
Gielkens, M.M.2
de Vries, R.P.3
Visser, J.4
de Graaff, L.H.5
-
48
-
-
0031962771
-
Isolation and analysis of xlnR, encoding a transcriptional activator co-ordinating xylanolytic expression in Aspergillus niger
-
van Peij NN, Visser J, de Graaff LH. 1998. Isolation and analysis of xlnR, encoding a transcriptional activator co-ordinating xylanolytic expression in Aspergillus niger. Mol. Microbiol. 27:131-142.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 131-142
-
-
van Peij, N.N.1
Visser, J.2
de Graaff, L.H.3
|