메뉴 건너뛰기




Volumn 7292 LNBI, Issue , 2012, Pages 263-274

Algorithms for knowledge-enhanced supertrees

Author keywords

Evolutionary biology; Robinson Foulds; supertree

Indexed keywords

EVOLUTIONARY BIOLOGY; EXACT SOLUTION; NP-HARD; PERFORMANCE BASED; PHYLOGENETIC RELATIONSHIPS; PHYLOGENETIC TREES; ROBINSON; ROBINSON-FOULDS; SUPERTREE;

EID: 84861112363     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-30191-9_25     Document Type: Conference Paper
Times cited : (5)

References (26)
  • 5
    • 84861137137 scopus 로고    scopus 로고
    • Exploring diversification and genome size evolution in extant gymnosperms through phylogenetic synthesis
    • Burleigh, J.G., Barbazuk, W.B., Davis, J.M., Morse, A.M., Soltis, P.S.: Exploring diversification and genome size evolution in extant gymnosperms through phylogenetic synthesis. Journal of Botany, 292857 (2012)
    • (2012) Journal of Botany , pp. 292857
    • Burleigh, J.G.1    Barbazuk, W.B.2    Davis, J.M.3    Morse, A.M.4    Soltis, P.S.5
  • 8
    • 79955802504 scopus 로고    scopus 로고
    • Fast Local Search for Unrooted Robinson-Foulds Supertrees
    • Chen, J., Wang, J., Zelikovsky, A. (eds.) ISBRA Springer, Heidelberg
    • Chaudhary, R., Burleigh, J.G., Fern'andez-Baca, D.: Fast Local Search for Unrooted Robinson-Foulds Supertrees. In: Chen, J., Wang, J., Zelikovsky, A. (eds.) ISBRA LNCS, vol. 6674, pp. 184-196. Springer, Heidelberg (2011)
    • (2011) LNCS , vol.6674 , pp. 184-196
    • Chaudhary, R.1    Burleigh, J.G.2    Fern'Andez-Baca, D.3
  • 10
    • 34247128200 scopus 로고    scopus 로고
    • The relevance of phylogeny to studies of global change
    • Edwards, E.J., Still, C.J., Donoghue, M.J.: The relevance of phylogeny to studies of global change. Trends Ecol. Evol. 22, 243-249 (2007)
    • (2007) Trends Ecol. Evol. , vol.22 , pp. 243-249
    • Edwards, E.J.1    Still, C.J.2    Donoghue, M.J.3
  • 11
    • 33847171828 scopus 로고    scopus 로고
    • Preserving the evolutionary potential of floras in biodiversity hotspots
    • Forest, F., Grenyer, R., Rouget, M., Davies, T.J., et al.: Preserving the evolutionary potential of floras in biodiversity hotspots. Nature 445, 757-760 (2007)
    • (2007) Nature , vol.445 , pp. 757-760
    • Forest, F.1    Grenyer, R.2    Rouget, M.3    Davies, T.J.4
  • 12
    • 0033723163 scopus 로고    scopus 로고
    • New algorithms for the duplication-loss model
    • Hallett, M.T., Lagergren, J.: New algorithms for the duplication-loss model. In: RECOMB, pp. 138-146 (2000)
    • (2000) RECOMB , pp. 138-146
    • Hallett, M.T.1    Lagergren, J.2
  • 14
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • Jones, D.T., Taylor, W.R., Thornton, J.M.: The rapid generation of mutation data matrices from protein sequences. Comp. Appl. Biosci. 8, 25-282 (1992)
    • (1992) Comp. Appl. Biosci. , vol.8 , pp. 25-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 15
    • 0034938644 scopus 로고    scopus 로고
    • From gene trees to species trees
    • Ma, B., Li, M., Zhang, L.: From gene trees to species trees. SIAM J. Comput. 30, 729-752 (2000)
    • (2000) SIAM J. Comput. , vol.30 , pp. 729-752
    • Ma, B.1    Li, M.2    Zhang, L.3
  • 17
    • 0032030505 scopus 로고    scopus 로고
    • Phylogenetic supertrees: Assembling the trees of life
    • Sanderson, M.J., Purvis, A., Henze, C.: Phylogenetic supertrees: Assembling the trees of life. Trends Ecol. Evol. 13, 105-109 (1998)
    • (1998) Trends Ecol. Evol. , vol.13 , pp. 105-109
    • Sanderson, M.J.1    Purvis, A.2    Henze, C.3
  • 18
    • 33750403801 scopus 로고    scopus 로고
    • Raxml-vi-hpc: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis, A.: Raxml-vi-hpc: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688-2690 (2006)
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 19
    • 50249100595 scopus 로고    scopus 로고
    • A fast bootstrapping algorithm for the raxml web-servers
    • Stamatakis, A., Hoover, P., Rougemont, J.: A fast bootstrapping algorithm for the raxml web-servers. In Systematic Biology 57(5), 758-771 (2008)
    • (2008) Systematic Biology , vol.57 , Issue.5 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 21
    • 70349658769 scopus 로고    scopus 로고
    • Species tree inference by minimizing deep coalescences
    • Than, C., Nakhleh, L.: Species tree inference by minimizing deep coalescences. PLoS Comput. Biol. 5(9), e1000501 (2009)
    • (2009) PLoS Comput. Biol. , vol.5 , Issue.9
    • Than, C.1    Nakhleh, L.2
  • 23
    • 46249126320 scopus 로고    scopus 로고
    • Duptree: A program for large-scale phylogenetic analyses using gene tree parsimony
    • Wehe, A., Bansal, M.S., Burleigh, J.G., Eulenstein, O.: Duptree: A program for large-scale phylogenetic analyses using gene tree parsimony. Bioinformatics 24(13), 1540-1541 (2008)
    • (2008) Bioinformatics , vol.24 , Issue.13 , pp. 1540-1541
    • Wehe, A.1    Bansal, M.S.2    Burleigh, J.G.3    Eulenstein, O.4
  • 25
    • 80955136714 scopus 로고    scopus 로고
    • Algorithms for mdc-based multi-locus phylogeny inference: Beyond rooted binary gene trees on single alleles
    • Yu, Y., Warnow, L., Nakhleh, T.: Algorithms for mdc-based multi-locus phylogeny inference: beyond rooted binary gene trees on single alleles. J. Comput Biol. 18(11), 1543-1559 (2011)
    • (2011) J. Comput Biol. , vol.18 , Issue.11 , pp. 1543-1559
    • Yu, Y.1    Warnow, L.2    Nakhleh, T.3
  • 26
    • 75149146844 scopus 로고    scopus 로고
    • Inferring a species tree from gene trees under the deep coalescence cost
    • Zhang, L.: Inferring a species tree from gene trees under the deep coalescence cost. In: RECOMB, pp. 192-193 (2000)
    • (2000) RECOMB , pp. 192-193
    • Zhang, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.