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Volumn 28, Issue 9, 2012, Pages 1287-1289

GRIP: A computational tool to simulate transcription factor binding in prokaryotes

Author keywords

[No Author keywords available]

Indexed keywords

PROKARYOTA;

EID: 84860495813     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts132     Document Type: Article
Times cited : (9)

References (12)
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  • 3
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  • 4
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    • Models of transcription factor binding: sensitivity of activation functions to model assumptions
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    • Chu, D.1
  • 5
    • 77949397232 scopus 로고    scopus 로고
    • Facilitated search of proteins on DNA: correlations are important
    • Das, R.K. and Kolomeisky, A.B. (2010) Facilitated search of proteins on DNA: correlations are important. Phys. Chem. Chem. Phys., 12, 2999-3004.
    • (2010) Phys. Chem. Chem. Phys. , vol.12 , pp. 2999-3004
    • Das, R.K.1    Kolomeisky, A.B.2
  • 6
    • 34249932435 scopus 로고    scopus 로고
    • Probing transcription factor dynamics at the single-molecule level in a living cell
    • Elf, J. et al. (2007) Probing transcription factor dynamics at the single-molecule level in a living cell. Science, 316, 1191-1194.
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    • Elf, J.1
  • 7
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    • Physical constraints and functional characteristics of transcription factor-DNA interaction
    • Gerland, U. et al. (2002) Physical constraints and functional characteristics of transcription factor-DNA interaction. PNAS, 99, 12015-12020.
    • (2002) PNAS , vol.99 , pp. 12015-12020
    • Gerland, U.1
  • 8
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
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    • Gillespie, D.T.1
  • 9
    • 72149127671 scopus 로고    scopus 로고
    • How a protein searches for its site on DNA: the mechanism of facilitated diffusion
    • Mirny, L. et al. (2009) How a protein searches for its site on DNA: the mechanism of facilitated diffusion. J. Phys. A, Math. Theor., 42, 434013.
    • (2009) J. Phys. A, Math. Theor. , vol.42 , pp. 434013
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  • 10
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    • Diffusion of transcription factors can drastically enhance the noise in gene expression
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  • 12
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    • Spatial effects on the speed and reliability of protein-DNA search
    • Wunderlich, Z. and Mirny, L.A. (2008) Spatial effects on the speed and reliability of protein-DNA search. Nucleic Acids Res., 36, 3570-3578.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.