-
1
-
-
0014958182
-
Stereochemistry of cooperative effects in haemoglobin
-
Perutz MF. Stereochemistry of cooperative effects in haemoglobin. Nature 1970; 228: 726-739.
-
(1970)
Nature
, vol.228
, pp. 726-739
-
-
Perutz, M.F.1
-
2
-
-
0018361151
-
Haemoglobin: the structural changes related to ligand binding and its allosteric mechanism
-
Baldwin J, Chothia C. Haemoglobin: the structural changes related to ligand binding and its allosteric mechanism. J Mol Biol 1979; 129: 175-220.
-
(1979)
J Mol Biol
, vol.129
, pp. 175-220
-
-
Baldwin, J.1
Chothia, C.2
-
3
-
-
78651189765
-
On the nature of allosteric transition: a plausible model
-
Monod J, Wyman J, Changeux JP. On the nature of allosteric transition: a plausible model. J Mol Biol 1965; 12: 88-118.
-
(1965)
J Mol Biol
, vol.12
, pp. 88-118
-
-
Monod, J.1
Wyman, J.2
Changeux, J.P.3
-
5
-
-
0031800335
-
Deciphering the molecular code of hemoglobin allostery
-
Ackers GK. Deciphering the molecular code of hemoglobin allostery. Adv Protein Chem 1998; 51: 185-253.
-
(1998)
Adv Protein Chem
, vol.51
, pp. 185-253
-
-
Ackers, G.K.1
-
6
-
-
0025903710
-
The mutation beta 99 Asp-Tyr stabilizes Y-a new, composite quaternary state of human hemoglobin
-
Smith FR, Lattman EE, Carter CW, Jr. The mutation beta 99 Asp-Tyr stabilizes Y-a new, composite quaternary state of human hemoglobin. Proteins 1991; 10: 81-91.
-
(1991)
Proteins
, vol.10
, pp. 81-91
-
-
Smith, F.R.1
Lattman, E.E.2
Carter Jr, C.W.3
-
7
-
-
0026795182
-
A third quaternary structure of human hemoglobin A at 1.7-A resolution
-
Silva MM, Rogers PH, Arnone A. A third quaternary structure of human hemoglobin A at 1.7-A resolution. J Biol Chem 1992; 267: 17248-17256.
-
(1992)
J Biol Chem
, vol.267
, pp. 17248-17256
-
-
Silva, M.M.1
Rogers, P.H.2
Arnone, A.3
-
8
-
-
0027498175
-
The quaternary structure of carbonmonoxy hemoglobin ypsilanti
-
Janin J, Wodak SJ. The quaternary structure of carbonmonoxy hemoglobin ypsilanti. Proteins 1993; 15: 1-4.
-
(1993)
Proteins
, vol.15
, pp. 1-4
-
-
Janin, J.1
Wodak, S.J.2
-
9
-
-
0027988868
-
The T-to-R transformation in hemoglobin: a reevaluation
-
Srinivasan R, Rose GD. The T-to-R transformation in hemoglobin: a reevaluation. Proc Natl Acad Sci USA 1994; 91: 11113-11117.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 11113-11117
-
-
Srinivasan, R.1
Rose, G.D.2
-
10
-
-
0033954256
-
The Protein Data Bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE. The Protein Data Bank. Nucleic Acids Res 2000; 28: 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
11
-
-
0031587292
-
The high resolution crystal structure of deoxyhemoglobin S
-
Harrington DJ, Adachi K, Royer WE, Jr. The high resolution crystal structure of deoxyhemoglobin S. J Mol Biol 1997; 272: 398-407.
-
(1997)
J Mol Biol
, vol.272
, pp. 398-407
-
-
Harrington, D.J.1
Adachi, K.2
Royer Jr, W.E.3
-
12
-
-
33745571654
-
1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms
-
Park SY, Yokoyama T, Shibayama N, Shiro Y, Tame JR. 1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms. J Mol Biol 2006; 360: 690-701.
-
(2006)
J Mol Biol
, vol.360
, pp. 690-701
-
-
Park, S.Y.1
Yokoyama, T.2
Shibayama, N.3
Shiro, Y.4
Tame, J.R.5
-
13
-
-
58149415056
-
Structure and function of haemoglobin. III. A three-dimensional fourier synthesis of human deoxyhaemoglobin at 5.5 Angstrom resolution
-
Muirhead H, Cox JM, Mazzarella L, Perutz MF. Structure and function of haemoglobin. III. A three-dimensional fourier synthesis of human deoxyhaemoglobin at 5.5 Angstrom resolution. J Mol Biol 1967; 28: 117-156.
-
(1967)
J Mol Biol
, vol.28
, pp. 117-156
-
-
Muirhead, H.1
Cox, J.M.2
Mazzarella, L.3
Perutz, M.F.4
-
14
-
-
0028304962
-
Satisfying hydrogen bonding potential in proteins
-
McDonald IK, Thornton JM. Satisfying hydrogen bonding potential in proteins. J Mol Biol 1994; 238: 777-793.
-
(1994)
J Mol Biol
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
16
-
-
33747818007
-
CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues
-
Dundas J, Ouyang Z, Tseng J, Binkowski A, Turpaz Y, Liang J. CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues. Nucleic Acids Res 2006; 34: W116-W118.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Dundas, J.1
Ouyang, Z.2
Tseng, J.3
Binkowski, A.4
Turpaz, Y.5
Liang, J.6
-
17
-
-
52949132638
-
Cavities and atomic packing in protein structures and interfaces
-
Sonavane S, Chakrabarti P. Cavities and atomic packing in protein structures and interfaces. PLoS Comput Biol 2008; 4: e1000188.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Sonavane, S.1
Chakrabarti, P.2
-
18
-
-
0021908041
-
Reaction pathway for the quaternary structure change in hemoglobin
-
Janin J, Wodak SJ. Reaction pathway for the quaternary structure change in hemoglobin. Biopolymers 1985; 24: 509-526.
-
(1985)
Biopolymers
, vol.24
, pp. 509-526
-
-
Janin, J.1
Wodak, S.J.2
-
19
-
-
0026620795
-
High resolution crystal structures and comparisons of T-state deoxyhaemoglobin and two liganded T-state haemoglobins: T(alpha-oxy)haemoglobin and T(met)haemoglobin
-
Liddington R, Derewenda Z, Dodson E, Hubbard R, Dodson G. High resolution crystal structures and comparisons of T-state deoxyhaemoglobin and two liganded T-state haemoglobins: T(alpha-oxy)haemoglobin and T(met)haemoglobin. J Mol Biol 1992; 228: 551-579.
-
(1992)
J Mol Biol
, vol.228
, pp. 551-579
-
-
Liddington, R.1
Derewenda, Z.2
Dodson, E.3
Hubbard, R.4
Dodson, G.5
-
20
-
-
0027381305
-
Human deoxyhaemoglobin-2,3-diphospho-glycerate complex low-salt structure at 2.5 A resolution
-
Richard V, Dodson GG, Mauguen Y. Human deoxyhaemoglobin-2, 3-diphospho-glycerate complex low-salt structure at 2.5 A resolution. J Mol Biol 1993; 233: 270-274.
-
(1993)
J Mol Biol
, vol.233
, pp. 270-274
-
-
Richard, V.1
Dodson, G.G.2
Mauguen, Y.3
-
21
-
-
17644375152
-
Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions
-
Kavanaugh JS, Rogers PH, Arnone A. Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions. Biochemistry 2005; 44: 6101-6121.
-
(2005)
Biochemistry
, vol.44
, pp. 6101-6121
-
-
Kavanaugh, J.S.1
Rogers, P.H.2
Arnone, A.3
-
22
-
-
20444417111
-
The enigma of the liganded hemoglobin end state: a novel quaternary structure of human carbonmonoxy hemoglobin
-
Safo MK, Abraham DJ. The enigma of the liganded hemoglobin end state: a novel quaternary structure of human carbonmonoxy hemoglobin. Biochemistry 2005; 44: 8347-8359.
-
(2005)
Biochemistry
, vol.44
, pp. 8347-8359
-
-
Safo, M.K.1
Abraham, D.J.2
-
23
-
-
0029062547
-
Allosteric transition intermediates modelled by crosslinked haemoglobins
-
Schumacher MA, Dixon MM, Kluger R, Jones RT, Brennan RG. Allosteric transition intermediates modelled by crosslinked haemoglobins. Nature 1995; 375: 84-87.
-
(1995)
Nature
, vol.375
, pp. 84-87
-
-
Schumacher, M.A.1
Dixon, M.M.2
Kluger, R.3
Jones, R.T.4
Brennan, R.G.5
-
24
-
-
58549107820
-
Structure of relaxed-state human hemoglobin: insight into ligand uptake, transport and release
-
Jenkins JD, Musayev FN, Danso-Danquah R, Abraham DJ, Safo MK. Structure of relaxed-state human hemoglobin: insight into ligand uptake, transport and release. Acta Crystallogr D Biol Crystallogr 2009; 65: 41-48.
-
(2009)
Acta Crystallogr D Biol Crystallogr
, vol.65
, pp. 41-48
-
-
Jenkins, J.D.1
Musayev, F.N.2
Danso-Danquah, R.3
Abraham, D.J.4
Safo, M.K.5
-
25
-
-
0030838618
-
Allosteric intermediates indicate R2 is the liganded hemoglobin end state
-
Schumacher MA, Zheleznova EE, Poundstone KS, Kluger R, Jones RT, Brennan RG. Allosteric intermediates indicate R2 is the liganded hemoglobin end state. Proc Natl Acad Sci USA 1997; 94: 7841-7844.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 7841-7844
-
-
Schumacher, M.A.1
Zheleznova, E.E.2
Poundstone, K.S.3
Kluger, R.4
Jones, R.T.5
Brennan, R.G.6
-
26
-
-
0032540854
-
Crystal structure of a human embryonic haemoglobin: the carbonmonoxy form of gower II (alpha2 epsilon2) haemoglobin at 2.9 A resolution
-
Sutherland-Smith AJ, Baker HM, Hofmann OM, Brittain T, Baker EN. Crystal structure of a human embryonic haemoglobin: the carbonmonoxy form of gower II (alpha2 epsilon2) haemoglobin at 2.9 A resolution. J Mol Biol 1998; 280: 475-484.
-
(1998)
J Mol Biol
, vol.280
, pp. 475-484
-
-
Sutherland-Smith, A.J.1
Baker, H.M.2
Hofmann, O.M.3
Brittain, T.4
Baker, E.N.5
-
27
-
-
0022240308
-
Haemoglobin: the surface buried between the α1β1 and α2β2 dimers in the deoxy and oxy structures
-
Lesk AM, Janin J, Wodak S, Chothia C. Haemoglobin: the surface buried between the α1β1 and α2β2 dimers in the deoxy and oxy structures. J Mol Biol 1985; 183: 267-270.
-
(1985)
J Mol Biol
, vol.183
, pp. 267-270
-
-
Lesk, A.M.1
Janin, J.2
Wodak, S.3
Chothia, C.4
-
28
-
-
0028916221
-
Structure and oxygen affinity of crystalline desArg141 alpha human hemoglobin A in the T state
-
Kavanaugh JS, Chafin DR, Arnone A, Mozzarelli A, Rivetti C, Rossi GL, Kwiatkowski LD, Noble RW. Structure and oxygen affinity of crystalline desArg141 alpha human hemoglobin A in the T state. J Mol Biol 1995; 248: 136-150.
-
(1995)
J Mol Biol
, vol.248
, pp. 136-150
-
-
Kavanaugh, J.S.1
Chafin, D.R.2
Arnone, A.3
Mozzarelli, A.4
Rivetti, C.5
Rossi, G.L.6
Kwiatkowski, L.D.7
Noble, R.W.8
-
29
-
-
52649130704
-
Protein-protein interaction and quaternary structure
-
Janin J, Bahadur RP, Chakrabarti P. Protein-protein interaction and quaternary structure. Q Rev Biophys 2008; 41: 133-80.
-
(2008)
Q Rev Biophys
, vol.41
, pp. 133-180
-
-
Janin, J.1
Bahadur, R.P.2
Chakrabarti, P.3
-
31
-
-
0015977588
-
The interpretation of protein structures: total volume, group volume distributions and packing density
-
Richards FM. The interpretation of protein structures: total volume, group volume distributions and packing density. J Mol Biol 1974; 82: 1-14.
-
(1974)
J Mol Biol
, vol.82
, pp. 1-14
-
-
Richards, F.M.1
-
32
-
-
1042275583
-
A dissection of specific and non-specific protein-protein interfaces
-
Bahadur RP, Chakrabarti P, Rodier F, Janin J. A dissection of specific and non-specific protein-protein interfaces. J Mol Biol 2004; 336: 943-955.
-
(2004)
J Mol Biol
, vol.336
, pp. 943-955
-
-
Bahadur, R.P.1
Chakrabarti, P.2
Rodier, F.3
Janin, J.4
-
33
-
-
0028881975
-
SURFNET: a program for visualizing molecular surfaces, cavities, and intermolecular interactions
-
Laskowski RA. SURFNET: a program for visualizing molecular surfaces, cavities, and intermolecular interactions. J Mol Graph 1995; 13: 323-330.
-
(1995)
J Mol Graph
, vol.13
, pp. 323-330
-
-
Laskowski, R.A.1
-
34
-
-
0027772959
-
Shape complementarity at protein/protein interfaces
-
Lawrence MC, Colman PM. Shape complementarity at protein/protein interfaces. J Mol Biol 1993; 234: 946-950.
-
(1993)
J Mol Biol
, vol.234
, pp. 946-950
-
-
Lawrence, M.C.1
Colman, P.M.2
-
35
-
-
77950867698
-
The subunit interfaces of weakly associated homodimeric proteins
-
Dey S, Pal A, Chakrabarti P, Janin J. The subunit interfaces of weakly associated homodimeric proteins. J Mol Biol 2010; 398: 146-160.
-
(2010)
J Mol Biol
, vol.398
, pp. 146-160
-
-
Dey, S.1
Pal, A.2
Chakrabarti, P.3
Janin, J.4
-
36
-
-
0028607523
-
Cavities and packing at protein interfaces
-
Hubbard SJ, Argos P. Cavities and packing at protein interfaces. Protein Sci 1994; 3: 2194-2206.
-
(1994)
Protein Sci
, vol.3
, pp. 2194-2206
-
-
Hubbard, S.J.1
Argos, P.2
-
37
-
-
0029133271
-
Evidence on close packing and cavities in proteins
-
Hubbard SJ, Argos P. Evidence on close packing and cavities in proteins. Curr Opin Biotechnol 1995; 6: 375-381.
-
(1995)
Curr Opin Biotechnol
, vol.6
, pp. 375-381
-
-
Hubbard, S.J.1
Argos, P.2
-
38
-
-
0016694062
-
Hemoglobin interaction in sickle cell fibers. I: Theoretical approaches to the molecular contacts
-
Levinthal C, Wodak SJ, Kahn P, Dadivanian AK. Hemoglobin interaction in sickle cell fibers. I: Theoretical approaches to the molecular contacts. Proc Natl Acad Sci USA 1975; 72: 1330-1334.
-
(1975)
Proc Natl Acad Sci USA
, vol.72
, pp. 1330-1334
-
-
Levinthal, C.1
Wodak, S.J.2
Kahn, P.3
Dadivanian, A.K.4
-
39
-
-
0034687668
-
Interface sliding as illustrated by the multiple quaternary structures of liganded hemoglobin
-
Mueser TC, Rogers PH, Arnone A. Interface sliding as illustrated by the multiple quaternary structures of liganded hemoglobin. Biochemistry 2000; 39: 15353-15364.
-
(2000)
Biochemistry
, vol.39
, pp. 15353-15364
-
-
Mueser, T.C.1
Rogers, P.H.2
Arnone, A.3
-
40
-
-
0037457899
-
Quaternary structure of hemoglobin in solution
-
Lukin JA, Kontaxis G, Simplaceanu V, Yuan Y, Bax A, Ho C. Quaternary structure of hemoglobin in solution. Proc Natl Acad Sci USA 2003; 100: 517-520.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 517-520
-
-
Lukin, J.A.1
Kontaxis, G.2
Simplaceanu, V.3
Yuan, Y.4
Bax, A.5
Ho, C.6
-
41
-
-
33645978391
-
Quaternary structure of carbonmonoxyhemoglobins in solution: structural changes induced by the allosteric effector inositol hexaphosphate
-
Gong Q, Simplaceanu V, Lukin JA, Giovannelli JL, Ho NT, Ho C. Quaternary structure of carbonmonoxyhemoglobins in solution: structural changes induced by the allosteric effector inositol hexaphosphate. Biochemistry 2006; 45: 5140-5148.
-
(2006)
Biochemistry
, vol.45
, pp. 5140-5148
-
-
Gong, Q.1
Simplaceanu, V.2
Lukin, J.A.3
Giovannelli, J.L.4
Ho, N.T.5
Ho, C.6
-
42
-
-
34548496030
-
Insights into the solution structure of human deoxyhemoglobin in the absence and presence of an allosteric effector
-
Sahu SC, Simplaceanu V, Gong Q, Ho NT, Tian F, Prestegard JH, Ho C. Insights into the solution structure of human deoxyhemoglobin in the absence and presence of an allosteric effector. Biochemistry 2007; 46: 9973-9980.
-
(2007)
Biochemistry
, vol.46
, pp. 9973-9980
-
-
Sahu, S.C.1
Simplaceanu, V.2
Gong, Q.3
Ho, N.T.4
Tian, F.5
Prestegard, J.H.6
Ho, C.7
-
43
-
-
0037474541
-
Structural characterisation and functional significance of transient protein-protein interactions
-
Nooren IM, Thornton JM. Structural characterisation and functional significance of transient protein-protein interactions. J Mol Biol 2003; 325: 991-1018.
-
(2003)
J Mol Biol
, vol.325
, pp. 991-1018
-
-
Nooren, I.M.1
Thornton, J.M.2
-
44
-
-
0026675775
-
Mutagenic dissection of hemoglobin cooperativity: effects of amino acid alteration on subunit assembly of oxy and deoxy tetramers
-
Turner GJ, Galacteros F, Doyle ML, Hedlund B, Pettigrew DW, Turner BW, Smith FR, Moo-Penn W, Rucknagel DL, Ackers GK. Mutagenic dissection of hemoglobin cooperativity: effects of amino acid alteration on subunit assembly of oxy and deoxy tetramers. Proteins 1992; 14: 333-350.
-
(1992)
Proteins
, vol.14
, pp. 333-350
-
-
Turner, G.J.1
Galacteros, F.2
Doyle, M.L.3
Hedlund, B.4
Pettigrew, D.W.5
Turner, B.W.6
Smith, F.R.7
Moo-Penn, W.8
Rucknagel, D.L.9
Ackers, G.K.10
-
45
-
-
0030590215
-
A functional role for protein cavities in domain: domain motions
-
Hubbard SJ, Argos P. A functional role for protein cavities in domain: domain motions. J Mol Biol 1996; 261: 289-300.
-
(1996)
J Mol Biol
, vol.261
, pp. 289-300
-
-
Hubbard, S.J.1
Argos, P.2
|