A universal real-time assay for the detection of Lyssaviruses

Journal of Virological Methods

Volumn 177, Issue 1, 2011, Pages 87-93

  Hayman, David T S ^a,b,c,d   Banyard, Ashley C ^a   Wakeley, Philip R ^a   Harkess, Graeme ^a   Marston, Denise ^a   Wood, J L N ^b   Cunningham, Andrew A ^c   Fooks, Anthony R ^a,e  

^a VETERINARY LABORATORIES AGENCY   (United Kingdom)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^c INSTITUTE OF ZOOLOGY   (United Kingdom)

^d Department of Environmental and Radiological Health Sciences   (United States)

^e UNIVERSITY OF LIVERPOOL   (United Kingdom)

Author keywords

Bat; Lyssavirus; Rabies; Real time PCR; SYBR Green; Synthetic DNA

Indexed keywords

SYNTHETIC DNA; VIRUS RNA;

ANIMAL TISSUE; ARAVAN VIRUS; ARTICLE; AUSTRALIAN BAT LYSSAVIRUS 1; CONTROLLED STUDY; DUVENHAGE VIRUS; EUROPEAN BAT LYSSAVIRUS 1; EUROPEAN BAT LYSSAVIRUS 2; IRKUT VIRUS; KHUJAND VIRUS; LAGOS BAT LYSSAVIRUS; LIMIT OF DETECTION; MOKOLA VIRUS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RABIES VIRUS; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION; RHABDOVIRUS; SENSITIVITY AND SPECIFICITY; SHIMONI BAT VIRUS; SPECIES IDENTIFICATION; VIRUS DETECTION; VIRUS GENE; WEST CAUCASIAN BAT VIRUS;

ANIMALS; BASE SEQUENCE; GENES, VIRAL; LYSSAVIRUS; MOLECULAR SEQUENCE DATA; REAL-TIME POLYMERASE CHAIN REACTION; RHABDOVIRIDAE INFECTIONS; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT;

LYSSAVIRUS; MOKOLA VIRUS; RABIES VIRUS;

EID: 84860389106     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2011.07.002     Document Type: Article

References (39)

1. Badrane H., Bahloul C., Perrin P., Tordo N. Evidence of two Lyssavirus phylogroups with distinct pathogenicity and immunogenicity. J. Virol. 2001, 75:3268-3276.
2. Badrane H., Tordo N. Host switching in Lyssavirus history from the Chiroptera to the Carnivora orders. J. Virol. 2001, 75:8096-8104.
3. Banyard A., Hayman D.T.S., Johnson N., McElhinney L., Fooks A.R. Bats and Lyssaviruses. Adv. Virus Res. 2011, 79:239-289.
4. Brookes S.M., Healy D.M., Fooks A.R. Ability of rabies vaccine strains to elicit cross-neutralising antibodies. Dev. Biol. (Basel) 2006, 125:185-193.
5. Brookes S.M., Parsons G., Johnson N., McElhinney L.M., Fooks A.R. Rabies human diploid cell vaccine elicits cross-neutralising and cross-protecting immune responses against European and Australian bat Lyssaviruses. Vaccine 2005, 23:4101-4109.
6. Childs J., Real A.L. Epidemiology. Rabies 2007, 123-200. Elsevier, London. A.C. Jackson, W.H. Wunner (Eds.).
7. Coertse J., Weyer J., Nel L.H., Markotter W. Improved PCR methods for the detection of African rabies and rabies-related Lyssaviruses. J. Clin. Microbiol. 2010, 48:3949-3955.
8. Davis P.L., Rambaut A., Bourhy H., Holmes E.C. The evolutionary dynamics of canid and mongoose rabies virus in Southern Africa. Arch. Virol. 2007, 152:1251-1258.
9. Delmas O., Holmes E.C., Talbi C., Larrous F., Dacheux L., Bouchier C., Bourhy H. Genomic diversity and evolution of the Lyssaviruses. PLoS ONE 2008, 3:e2057.
10. Dzikwi A.A., Kuzmin I.I., Umoh J.U., Kwaga J.K., Ahmad A.A., Rupprecht C.E. Evidence of Lagos bat virus circulation among Nigerian fruit bats. J. Wildl. Dis. 2010, 46:267-271.
11. Fooks A.R., Johnson N., Freuling C.M., Wakeley P.R., Banyard A.C., McElhinney L.M., Marston D.A., Dastjerdi A., Wright E., Weiss R.A., Muller T. Emerging technologies for the detection of rabies virus: challenges and hopes in the 21st century. PLoS Negl. Trop. Dis. 2009, 3:e530.
12. Hanlon C.A., DeMattos C.A., DeMattos C.C., Niezgoda M., Hooper D.C., Koprowski H., Notkins A., Rupprecht C.E. Experimental utility of rabies virus-neutralizing human monoclonal antibodies in post-exposure prophylaxis. Vaccine 2001, 19:3834-3842.
13. Hanlon C.A., Kuzmin I.V., Blanton J.D., Weldon W.C., Manangan J.S., Rupprecht C.E. Efficacy of rabies biologics against new Lyssaviruses from Eurasia. Virus Res. 2005, 111:44-54.
14. Hass C.C., Dragoo J.W. Rabies in hooded and striped skunks in Arizona. J. Wildl. Dis. 2006, 42:825-829.
15. Heaton P.R., Johnstone P., McElhinney L.M., Cowley R., O'Sullivan E., Whitby J.E. Heminested PCR assay for detection of six genotypes of rabies and rabies-related viruses. J. Clin. Microbiol. 1997, 35:2762-2766.
16. © real-time RT-PCR 'double check' strategy. J. Clin. Microbiol. 2010, 48:3970-3978.
17. ICTV. 2009. Taxonomy: Updates Since the 8th Report, 2009. http://talk.ictvonline.org/files/ictv_official_taxonomy_updates_since_the_8th_report/m/vertebrate-2008/1208.aspx.
18. Johnson N., Black C., Smith J., Un H., McElhinney L.M., Aylan O., Fooks A.R. Rabies emergence among foxes in Turkey. J. Wildl. Dis. 2003, 39:262-270.
19. King A.A., Meredith C.D., Thomson G.R. The biology of southern African Lyssavirus variants. Curr. Top. Microbiol. Immunol. 1994, 187:267-295.
20. Knobel D.L., Cleaveland S., Coleman P.G., Fevre E.M., Meltzer M.I., Miranda M.E., Shaw A., Zinsstag J., Meslin F.X. Re-evaluating the burden of rabies in Africa and Asia. Bull. World Health Organ. 2005, 83:360-368.
21. Knobel D.L., Kaare M., Fevre E.M., Cleaveland S. Dog Rabies and its Control. Rabies 2007, 573-594. Elsevier. A.C. Jackson, W.H. Wunner (Eds.).
22. Kuzmin I. Possible emergence of West Caucasian bat virus in Africa. Emerg. Infect. Dis. 2008, 14:1887-1889.
23. Kuzmin I.V., Hughes G.J., Botvinkin A.D., Orciari L.A., Rupprecht C.E. Phylogenetic relationships of Irkut and West Caucasian bat viruses within the Lyssavirus genus and suggested quantitative criteria based on the N gene sequence for Lyssavirus genotype definition. Virus Res. 2005, 111:28-43.
24. Kuzmin I.V., Mayer A.E., Niezgoda M., Markotter W., Agwanda B., Breiman R.F., Rupprecht C.E. Shimoni bat virus, a new representative of the Lyssavirus genus. Virus Res. 2010, 149:197-210.
25. Kuzmin I.V., Niezgoda M., Franka R., Agwanda B., Markotter W., Beagley J.C., Urazova O.Y., Breiman R.F., Rupprecht C.E. Lagos bat virus in Kenya. J. Clin. Microbiol. 2008, 46:1451-1461.
26. Kuzmin I.V., Niezgoda M., Franka R., Agwanda B., Markotter W., Beagley J.C., Urazova O.Y., Breiman R.F., Rupprecht C.E. Possible emergence of West Caucasian bat virus in Africa. Emerg. Infect. Dis. 2008, 14:1887-1889.
27. Kuzmin I.V., Orciari L.A., Arai Y.T., Smith J.S., Hanlon C.A., Kameoka Y., Rupprecht C.E. Bat Lyssaviruses (Aravan and Khujand) from Central Asia: phylogenetic relationships according to N, P and G gene sequences. Virus Res. 2003, 97:65-79.
28. Markotter W., Kuzmin I., Rupprecht C.E., Nel L.H. Phylogeny of Lagos bat virus: Challenges for Lyssavirus taxonomy. Virus Res. 2008, 135:10-21.
29. Markotter W., Kuzmin I.V., Rupprecht C.E., Nel L.H. Lagos bat virus virulence in mice inoculated by the peripheral route. Epidemiol. Infect. 2009, 137:1155-1162.
30. Nel L.H., Thomson G.R., Von Teichman B.F. Molecular epidemiology of rabies virus in South Africa. Onderstepoort J. Vet. Res. 1993, 60:301-306.
31. Real L.A., Russell C., Waller L., Smith D., Childs J. Spatial dynamics and molecular ecology of North American rabies. J. Hered. 2005, 96:253-260.
32. Rupprecht C.E., Smith J.S., Fekadu M., Childs J.E. The ascension of wildlife rabies: a cause for public health concern or intervention?. Emerg. Infect. Dis. 1995, 1:107-114.
33. Sabeta C.T., Markotter W., Mohale D.K., Shumba W., Wandeler A.I., Nel L.H. Mokola virus in domestic mammals, South Africa. Emerg. Infect. Dis. 2007, 13:1371-1373.
34. Swanepoel R., Barnard B.J., Meredith C.D., Bishop G.C., Bruckner G.K., Foggin C.M., Hubschle O.J. Rabies in Southern Africa. Onderstepoort J. Vet. Res. 1993, 60:325-346.
35. Velasco-Villa A., Orciari L.A., Souza V., Juarez-Islas V., Gomez-Sierra M., Castillo A., Flisser A., Rupprecht C.E. Molecular epizootiology of rabies associated with terrestrial carnivores in Mexico. Virus Res. 2005, 111:13-27.
36. von Teichman B.F., Thomson G.R., Meredith C.D., Nel L.H. Molecular epidemiology of rabies virus in South Africa: evidence for two distinct virus groups. J. Gen. Virol. 1995, 76:73-82.
37. Wakeley P.R., Johnson N., McElhinney L.M., Marston D., Sawyer J., Fooks A.R. Development of a real-time, TaqMan reverse transcription-PCR assay for detection and differentiation of Lyssavirus genotypes 1, 5, and 6. J. Clin. Microbiol. 2005, 43:2786-2792.
38. Weyer J., Kuzmin I.V., Rupprecht C.E., Nel L.H. Cross-protective and cross-reactive immune responses to recombinant vaccinia viruses expressing full-length Lyssavirus glycoprotein genes. Epidemiol. Infect. 2008, 136:670-678.
39. Wright E., Hayman D.T., Vaughan A., Temperton N.J., Wood J.L., Cunningham A.A., Suu-Ire R., Weiss R.A., Fooks A.R. Virus neutralising activity of African fruit bat (Eidolon helvum) sera against emerging Lyssaviruses. Virology 2010, 408:183-189.