메뉴 건너뛰기




Volumn 89, Issue 3, 2012, Pages 185-192

Evaluation of four RNA extraction methods for gene expression analyses of Cryptosporidium parvum and Toxoplasma gondii oocysts

Author keywords

Cryptosporidium; Microarray; MRNA isolation; Oocyst; Real time PCR; Toxoplasma gondii

Indexed keywords

COMPLEMENTARY DNA; GENOMIC DNA; HEAT SHOCK PROTEIN 70; MESSENGER RNA;

EID: 84860368330     PISSN: 01677012     EISSN: 18728359     Source Type: Journal    
DOI: 10.1016/j.mimet.2012.03.010     Document Type: Article
Times cited : (7)

References (44)
  • 1
    • 0028986348 scopus 로고
    • An improved method for isolating RNA from coccidian oocysts
    • Abrahamsen M.S., Clark T.G., White M.W. An improved method for isolating RNA from coccidian oocysts. J. Parasitol. 1995, 81:107-109.
    • (1995) J. Parasitol. , vol.81 , pp. 107-109
    • Abrahamsen, M.S.1    Clark, T.G.2    White, M.W.3
  • 4
    • 10244259234 scopus 로고    scopus 로고
    • Improved purification methods for calf-derived Cryptosporidium parvum oocysts using discontinuous sucrose and cesium chloride gradients
    • Arrowood M.J., Donaldson K. Improved purification methods for calf-derived Cryptosporidium parvum oocysts using discontinuous sucrose and cesium chloride gradients. J. Eukaryot. Microbiol. 1996, 43:89S.
    • (1996) J. Eukaryot. Microbiol. , vol.43
    • Arrowood, M.J.1    Donaldson, K.2
  • 6
    • 77956231962 scopus 로고    scopus 로고
    • Treatment of cryptosporidiosis: do we know what we think we know?
    • Cabada M.M., White A.C. Treatment of cryptosporidiosis: do we know what we think we know?. Curr. Opin. Infect. Dis. 2010, 23:494-499.
    • (2010) Curr. Opin. Infect. Dis. , vol.23 , pp. 494-499
    • Cabada, M.M.1    White, A.C.2
  • 7
    • 0018126773 scopus 로고
    • Ultrastructure of excystment of Toxoplasma gondii oocysts
    • Christie E., Pappas P.W., Dubey J.P. Ultrastructure of excystment of Toxoplasma gondii oocysts. J. Protozool. 1978, 25:438-443.
    • (1978) J. Protozool. , vol.25 , pp. 438-443
    • Christie, E.1    Pappas, P.W.2    Dubey, J.P.3
  • 8
    • 77955468481 scopus 로고    scopus 로고
    • Cryptosporidiosis: environmental, therapeutic, and preventive challenges
    • Collinet-Adler S., Ward H.D. Cryptosporidiosis: environmental, therapeutic, and preventive challenges. Eur. J. Clin. Microbiol. Infect. Dis. 2010, 29:927-935.
    • (2010) Eur. J. Clin. Microbiol. Infect. Dis. , vol.29 , pp. 927-935
    • Collinet-Adler, S.1    Ward, H.D.2
  • 12
    • 0347357683 scopus 로고    scopus 로고
    • Cryptosporidium parvum regulation of human epithelial cell gene expression
    • Deng M., Lancto C.A., Abrahamsen M.S. Cryptosporidium parvum regulation of human epithelial cell gene expression. Int. J. Parasitol. 2004, 34:73-82.
    • (2004) Int. J. Parasitol. , vol.34 , pp. 73-82
    • Deng, M.1    Lancto, C.A.2    Abrahamsen, M.S.3
  • 13
    • 0030301884 scopus 로고    scopus 로고
    • Infectivity and pathogenicity of Toxoplasma gondii oocysts for cats
    • Dubey J.P. Infectivity and pathogenicity of Toxoplasma gondii oocysts for cats. J. Parasitol. 1996, 82:957-961.
    • (1996) J. Parasitol. , vol.82 , pp. 957-961
    • Dubey, J.P.1
  • 15
    • 0015417824 scopus 로고
    • A simplified method for isolation of Toxoplasma gondii from the feces of cats
    • Dubey J.P., Swan G.V., Frenkel J.K. A simplified method for isolation of Toxoplasma gondii from the feces of cats. J. Parasitol. 1972, 58:1005-1006.
    • (1972) J. Parasitol. , vol.58 , pp. 1005-1006
    • Dubey, J.P.1    Swan, G.V.2    Frenkel, J.K.3
  • 17
    • 57149098472 scopus 로고    scopus 로고
    • General biology
    • CRC Press and IWA Publishing, Boca Raton, FL, R. Fayer, L. Xiao (Eds.)
    • Fayer R. General biology. Cryptosporidium and Cryptosporidiosis 2008, 1-42. CRC Press and IWA Publishing, Boca Raton, FL. R. Fayer, L. Xiao (Eds.).
    • (2008) Cryptosporidium and Cryptosporidiosis , pp. 1-42
    • Fayer, R.1
  • 18
    • 33646928887 scopus 로고    scopus 로고
    • Bile acids enhance invasiveness of Cryptosporidium spp. into cultured cells
    • Feng H., Nie W., Sheoran A., Zhang Q., Tzipori S. Bile acids enhance invasiveness of Cryptosporidium spp. into cultured cells. Infect. Immun. 2006, 74:3342-3346.
    • (2006) Infect. Immun. , vol.74 , pp. 3342-3346
    • Feng, H.1    Nie, W.2    Sheoran, A.3    Zhang, Q.4    Tzipori, S.5
  • 19
    • 33644975004 scopus 로고    scopus 로고
    • RNA integrity and the effect on the real-time qRT-PCR performance
    • Fleige S., Pfaffl M.W. RNA integrity and the effect on the real-time qRT-PCR performance. Mol. Aspects Med. 2006, 27:126-139.
    • (2006) Mol. Aspects Med. , vol.27 , pp. 126-139
    • Fleige, S.1    Pfaffl, M.W.2
  • 20
    • 2942678961 scopus 로고    scopus 로고
    • Massive excystation of Toxoplasma gondii sporozoites
    • Freyre A., Falcon J. Massive excystation of Toxoplasma gondii sporozoites. Exp. Parasitol. 2004, 107:72-77.
    • (2004) Exp. Parasitol. , vol.107 , pp. 72-77
    • Freyre, A.1    Falcon, J.2
  • 22
    • 65549093106 scopus 로고    scopus 로고
    • Evaluation of two methods for quantification of hsp70 mRNA from the waterborne pathogen Cryptosporidium parvum by reverse transcription real-time PCR in environmental samples
    • Garces-Sanchez G., Wilderer P.A., Munch J.C., Horn H., Lebuhn M. Evaluation of two methods for quantification of hsp70 mRNA from the waterborne pathogen Cryptosporidium parvum by reverse transcription real-time PCR in environmental samples. Water Res. 2009, 43:2669-2678.
    • (2009) Water Res. , vol.43 , pp. 2669-2678
    • Garces-Sanchez, G.1    Wilderer, P.A.2    Munch, J.C.3    Horn, H.4    Lebuhn, M.5
  • 23
    • 80052272650 scopus 로고    scopus 로고
    • Accessed 26 September 2011, GraphPad
    • GraphPad Student T-test Accessed 26 September 2011. http://www.graphpad.com/quickcalcs/ttest2.cfm.
    • Student T-test
  • 24
    • 77950449482 scopus 로고    scopus 로고
    • Identification of differentially expressed genes in early stages of Eimeria tenella by suppression subtractive hybridization and cDNA microarray
    • Han H.Y., Lin J.J., Zhao Q.P., Dong H., Jiang L.L., Xu M.Q., Zhu S.H., Huang B. Identification of differentially expressed genes in early stages of Eimeria tenella by suppression subtractive hybridization and cDNA microarray. J. Parasitol. 2010, 96:95-102.
    • (2010) J. Parasitol. , vol.96 , pp. 95-102
    • Han, H.Y.1    Lin, J.J.2    Zhao, Q.P.3    Dong, H.4    Jiang, L.L.5    Xu, M.Q.6    Zhu, S.H.7    Huang, B.8
  • 27
    • 36448956746 scopus 로고    scopus 로고
    • Long-term storage of DNA-free RNA for use in vaccine studies
    • Jones K.L., Drane D., Gowans E.J. Long-term storage of DNA-free RNA for use in vaccine studies. Biotechniques 2007, 43:675-681.
    • (2007) Biotechniques , vol.43 , pp. 675-681
    • Jones, K.L.1    Drane, D.2    Gowans, E.J.3
  • 30
    • 33846556846 scopus 로고    scopus 로고
    • Evaluation of eight RNA isolation methods for transcriptional analysis in Campylobacter jejuni
    • Phongsisay V., Perera V.N., Fry B.N. Evaluation of eight RNA isolation methods for transcriptional analysis in Campylobacter jejuni. J. Microbiol. Methods 2007, 68:427-429.
    • (2007) J. Microbiol. Methods , vol.68 , pp. 427-429
    • Phongsisay, V.1    Perera, V.N.2    Fry, B.N.3
  • 31
    • 1942424073 scopus 로고    scopus 로고
    • Identification of a sporozoite-specific member of the Toxoplasma SAG superfamily via genetic complementation
    • Radke J.R., Gubbels M.J., Jerome M.E., Radke J.B., Striepen B., White M.W. Identification of a sporozoite-specific member of the Toxoplasma SAG superfamily via genetic complementation. Mol. Microbiol. 2004, 52:93-105.
    • (2004) Mol. Microbiol. , vol.52 , pp. 93-105
    • Radke, J.R.1    Gubbels, M.J.2    Jerome, M.E.3    Radke, J.B.4    Striepen, B.5    White, M.W.6
  • 33
    • 0027492209 scopus 로고
    • In vitro excystation of Cryptosporidium parvum
    • Robertson L.J., Campbell A.T., Smith H.V. In vitro excystation of Cryptosporidium parvum. Parasitology 1993, 106(Pt 1):13-19.
    • (1993) Parasitology , vol.106 , Issue.PART. 1 , pp. 13-19
    • Robertson, L.J.1    Campbell, A.T.2    Smith, H.V.3
  • 34
    • 77955897262 scopus 로고    scopus 로고
    • Comparison of commercial RNA extraction kits for preparation of DNA-free total RNA from Salmonella cells
    • Rump L.V., Asamoah B., Gonzalez-Escalona N. Comparison of commercial RNA extraction kits for preparation of DNA-free total RNA from Salmonella cells. BMC Res. Notes 2010, 3:211.
    • (2010) BMC Res. Notes , vol.3 , pp. 211
    • Rump, L.V.1    Asamoah, B.2    Gonzalez-Escalona, N.3
  • 36
    • 13944252964 scopus 로고    scopus 로고
    • Cryptosporidium excystation and invasion: getting to the guts of the matter
    • Smith H.V., Nichols R.A., Grimason A.M. Cryptosporidium excystation and invasion: getting to the guts of the matter. Trends Parasitol. 2005, 21:133-142.
    • (2005) Trends Parasitol. , vol.21 , pp. 133-142
    • Smith, H.V.1    Nichols, R.A.2    Grimason, A.M.3
  • 37
    • 77952581160 scopus 로고    scopus 로고
    • Obtaining highly purified Toxoplasma gondii oocysts using a discontinuous cesium chloride gradient
    • DOI: 1410.3791/1420
    • Staggs S.E., See M.J., Dubey J.P., Villegas E.N. Obtaining highly purified Toxoplasma gondii oocysts using a discontinuous cesium chloride gradient. J. Vis. Exp. 2009, 33:e1420. DOI: 1410.3791/1420.
    • (2009) J. Vis. Exp. , vol.33
    • Staggs, S.E.1    See, M.J.2    Dubey, J.P.3    Villegas, E.N.4
  • 39
    • 77952582181 scopus 로고    scopus 로고
    • Using quantitative reverse transcriptase PCR and cell culture plaque assays to determine resistance of Toxoplasma gondii oocysts to chemical sanitizers
    • Villegas E.N., Augustine S.A., Villegas L.F., Ware M.W., See M.J., Lindquist H.D., Schaefer F.W., Dubey J.P. Using quantitative reverse transcriptase PCR and cell culture plaque assays to determine resistance of Toxoplasma gondii oocysts to chemical sanitizers. J. Microbiol. Methods 2010, 81:219-225.
    • (2010) J. Microbiol. Methods , vol.81 , pp. 219-225
    • Villegas, E.N.1    Augustine, S.A.2    Villegas, L.F.3    Ware, M.W.4    See, M.J.5    Lindquist, H.D.6    Schaefer, F.W.7    Dubey, J.P.8
  • 40
    • 77349093023 scopus 로고    scopus 로고
    • Improved Cryptosporidium parvum oocyst propagation using dexamethasone suppressed CF-1 mice
    • Ware M.W., Villegas E.N. Improved Cryptosporidium parvum oocyst propagation using dexamethasone suppressed CF-1 mice. Vet. Parasitol. 2010, 168:329-331.
    • (2010) Vet. Parasitol. , vol.168 , pp. 329-331
    • Ware, M.W.1    Villegas, E.N.2
  • 41
    • 0031254494 scopus 로고    scopus 로고
    • Methods to prepare RNA and to isolate developmentally regulated genes from Eimeria
    • White M.W., Radke J.R. Methods to prepare RNA and to isolate developmentally regulated genes from Eimeria. Methods 1997, 13:158-170.
    • (1997) Methods , vol.13 , pp. 158-170
    • White, M.W.1    Radke, J.R.2
  • 42
    • 0032936392 scopus 로고    scopus 로고
    • Beta-tubulin mRNA as a marker of Cryptosporidium parvum oocyst viability
    • Widmer G., Orbacz E.A., Tzipori S. beta-tubulin mRNA as a marker of Cryptosporidium parvum oocyst viability. Appl. Environ. Microbiol. 1999, 65:1584-1588.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1584-1588
    • Widmer, G.1    Orbacz, E.A.2    Tzipori, S.3
  • 44
    • 77349111709 scopus 로고    scopus 로고
    • Cell sorting-assisted microarray profiling of host cell response to Cryptosporidium parvum infection
    • Yang Y.L., Buck G.A., Widmer G. Cell sorting-assisted microarray profiling of host cell response to Cryptosporidium parvum infection. Infect. Immun. 2010, 78:1040-1048.
    • (2010) Infect. Immun. , vol.78 , pp. 1040-1048
    • Yang, Y.L.1    Buck, G.A.2    Widmer, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.