Characterization of miR-10a mediated gene regulation in avian splenocytes

Gene

Volumn 500, Issue 1, 2012, Pages 107-114

  Trakooljul, Nares ^a   Hicks, Julie A ^a   Liu, Hsiao Ching ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

Author keywords

Chicken; MicroRNA; MiR 10a

Indexed keywords

MICRORNA 10A; RAS PROTEIN; RNA; UNCLASSIFIED DRUG;

ARTICLE; BIRD; EMBRYO; EMBRYO DEVELOPMENT; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETIC ANALYSIS; HEMATOPOIESIS; IMMUNE SYSTEM; IMMUNOGENETICS; IN VITRO STUDY; INTRACELLULAR SIGNALING; MICROARRAY ANALYSIS; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; SPLEEN CELL;

ANIMALS; AVIAN PROTEINS; CHICKENS; GENE EXPRESSION REGULATION; HEMATOPOIESIS; HOMEODOMAIN PROTEINS; MICRORNAS; SPLEEN; TRANSCRIPTION FACTORS;

AVES; EUKARYOTA; VERTEBRATA;

EID: 84860346422     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2012.03.028     Document Type: Article

References (39)

1. Buck A.H., et al. Post-transcriptional regulation of miR-27 in murine cytomegalovirus infection. RNA 2010, 16:307-315.
2. Chen C.Z., Li L., Lodish H.F., Bartel D.P. MicroRNAs modulate hematopoietic lineage differentiation. Science 2004, 303:83-86.
3. Chen M., Payne W.S., Hunt H., Zhang H., Holmen S.L., Dodgson J.B. Inhibition of Marek's disease virus replication by retroviral vector-based RNA interference. Virology 2008, 377:265-272.
4. Fang Y., Shi C., Manduchi E., Civelek M., Davies P.F. MicroRNA-10a regulation of proinflammatory phenotype in athero-susceptible endothelium in vivo and in vitro. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:13450-13455.
5. Fukao T., et al. An evolutionarily conserved mechanism for microRNA-223 expression revealed by microRNA gene profiling. Cell 2007, 129:617-631.
6. Gantier M.P., Sadler A.J., Williams B.R. Fine-tuning of the innate immune response by microRNAs. Immunol. Cell Biol. 2007, 85:458-462.
7. Garzon R., et al. MicroRNA fingerprints during human megakaryocytopoiesis. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:5078-5083.
8. Garzon R., et al. Distinctive microRNA signature of acute myeloid leukemia bearing cytoplasmic mutated nucleophosmin. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:3945-3950.
9. Govind S., Kozma R., Monfries C., Lim L., Ahmed S. Cdc42Hs facilitates cytoskeletal reorganization and neurite outgrowth by localizing the 58-kD insulin receptor substrate to filamentous actin. J. Cell Biol. 2001, 152:579-594.
10. Hand N.J., Master Z.R., Eauclaire S.F., Weinblatt D.E., Matthews R.P., Friedman J.R. The microRNA-30 family is required for vertebrate hepatobiliary development. Gastroenterology 2009, 136:1081-1090.
11. Hicks J.A., Tembhurne P.A., Liu H.C. Identification of microRNA in the developing chick immune organs. Immunogenetics 2009, 61:231-240.
12. Ho H.Y., et al. Toca-1 mediates Cdc42-dependent actin nucleation by activating the N-WASP-WIP complex. Cell 2004, 118:203-216.
13. Hou J., et al. MicroRNA-146a feedback inhibits RIG-I-dependent Type I IFN production in macrophages by targeting TRAF6, IRAK1, and IRAK2. J. Immunol. 2009, 183:2150-2158.
14. Jin P., et al. Differentiation of two types of mobilized peripheral blood stem cells by microRNA and cDNA expression analysis. J. Transl. Med. 2008, 6:39.
15. Johnson D.I., Pringle J.R. Molecular characterization of CDC42, a Saccharomyces cerevisiae gene involved in the development of cell polarity. J. Cell Biol. 1990, 111:143-152.
16. Koralov S.B., et al. Dicer ablation affects antibody diversity and cell survival in the B lymphocyte lineage. Cell 2008, 132:860-874.
17. Lee H.S., Lim C.J., Puzon-McLaughlin W., Shattil S.J., Ginsberg M.H. RIAM activates integrins by linking talin to ras GTPase membrane-targeting sequences. J. Biol. Chem. 2009, 284:5119-5127.
18. Li Q.J., et al. miR-181a is an intrinsic modulator of T cell sensitivity and selection. Cell 2007, 129:147-161.
19. Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-delta delta C(T)) method. Methods 2001, 25:402-408.
20. Lu T.T., Cyster J.G. Integrin-mediated long-term B cell retention in the splenic marginal zone. Science 2002, 297:409-412.
21. Luftman K., Hasan N., Day P., Hardee D., Hu C. Silencing of VAMP3 inhibits cell migration and integrin-mediated adhesion. Biochem. Biophys. Res. Commun. 2009, 380:65-70.
22. Lundquist E.A. Small GTPases. WormBook 2006, 17:1-18.
23. Mansfield J.H., et al. MicroRNA-responsive 'sensor' transgenes uncover Hox-like and other developmentally regulated patterns of vertebrate microRNA expression. Nat. Genet. 2004, 36:1079-1083.
24. Mittelbrunn M., et al. VLA-4 integrin concentrates at the peripheral supramolecular activation complex of the immune synapse and drives T helper 1 responses. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:11058-11063.
25. Muljo S.A., Ansel K.M., Kanellopoulou C., Livingston D.M., Rao A., Rajewsky K. Aberrant T cell differentiation in the absence of Dicer. J. Exp. Med. 2005, 202:261-269.
26. Navarro F., Lieberman J. Review. Small RNAs guide hematopoietic cell differentiation and function. J. Immunol. 2010, 184:5939-5947.
27. Neilson J.R., Zheng G.X., Burge C.B., Sharp P.A. Dynamic regulation of miRNA expression in ordered stages of cellular development. Genes Dev. 2007, 21:578-589.
28. O'Connell R.M., Taganov K.D., Boldin M.P., Cheng G., Baltimore D. MicroRNA-155 is induced during the macrophage inflammatory response. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:1604-1609.
29. O'Connell R.M., Rao D.S., Chaudhuri A.A., Baltimore D. Physiological and pathological roles for microRNAs in the immune system. Nat. Rev. Immunol. 2010, 10:111-122.
30. Sevignani C., Calin G.A., Siracusa L.D., Croce C.M. Mammalian microRNAs: a small world for fine-tuning gene expression. Mamm. Genome 2006, 17:189-202.
31. Sixt M., Bauer M., Lämmermann T., Fässler R. Beta1 integrins: zip codes and signaling relay for blood cells. Curr. Opin. Cell Biol. 2006, 18:482-490.
32. Taganov K.D., Boldin M.P., Chang K.J., Baltimore D. NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:12481-12486.
33. Tagawa H., Seto M. A microRNA cluster as a target of genomic amplification in malignant lymphoma. Leukemia 2005, 19:2013-2016.
34. Tan Y., et al. Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells. BMC Mol. Biol. 2009, 10:12.
35. Veerla S., et al. MiRNA expression in urothelial carcinomas: important roles of miR-10a, miR-222, miR-125b, miR-7 and miR-452 for tumor stage and metastasis, and frequent homozygous losses of miR-31. Int. J. Cancer 2009, 124:2236-2242.
36. Walenda T., et al. Co-culture with mesenchymal stromal cells increases proliferation and maintenance of haematopoietic progenitor cells. J. Cell. Mol. Med. 2010, 14:337-350.
37. Wilfred B.R., Wang W.X., Nelson P.T. Energizing miRNA research: a review of the role of miRNAs in lipid metabolism, with a prediction that miR-103/107 regulates human metabolic pathways. Mol. Genet. Metab. 2007, 91:209-217.
38. Wu C.I., Shen Y., Tang T. Evolution under canalization and the dual roles of microRNAs: a hypothesis. Genome Res. 2009, 19:734-743.
39. Xiao C., et al. MiR-150 controls B cell differentiation by targeting the transcription factor c-Myb. Cell 2007, 13:146-159.