-
1
-
-
34547395999
-
Overestimation and underestimation of hepatitis C virus RNA levels in a widely used real-time polymerase chain reaction-based method
-
S. Chevaliez, M. Bouvier-Alias, R. Brillet Overestimation and underestimation of hepatitis C virus RNA levels in a widely used real-time polymerase chain reaction-based method Hepatology 46 2007 22 31
-
(2007)
Hepatology
, vol.46
, pp. 22-31
-
-
Chevaliez, S.1
Bouvier-Alias, M.2
Brillet, R.3
-
2
-
-
77957796125
-
Performance of version 2.0 of the Cobas AmpliPrep/Cobas TaqMan real-time PCR assay for hepatitis B virus DNA quantification
-
S. Chevaliez, M. Bouvier-Alias, S. Laperche Performance of version 2.0 of the Cobas AmpliPrep/Cobas TaqMan real-time PCR assay for hepatitis B virus DNA quantification J Clin Microbiol 48 2010 3641 3647
-
(2010)
J Clin Microbiol
, vol.48
, pp. 3641-3647
-
-
Chevaliez, S.1
Bouvier-Alias, M.2
Laperche, S.3
-
3
-
-
66749184153
-
Performance of the Abbott real-time PCR assay using m2000sp and m2000rt for hepatitis C virus RNA quantification
-
S. Chevaliez, M. Bouvier-Alias, J.M. Pawlotsky Performance of the Abbott real-time PCR assay using m2000sp and m2000rt for hepatitis C virus RNA quantification J Clin Microbiol 47 2009 1726 1732
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1726-1732
-
-
Chevaliez, S.1
Bouvier-Alias, M.2
Pawlotsky, J.M.3
-
4
-
-
84855246680
-
Performance evaluation of the Artus hepatitis C virus QS-RGQ assay
-
P. Paba, L. Fabeni, C.F. Perno Performance evaluation of the Artus hepatitis C virus QS-RGQ assay J Virol Methods 179 2012 77 80
-
(2012)
J Virol Methods
, vol.179
, pp. 77-80
-
-
Paba, P.1
Fabeni, L.2
Perno, C.F.3
-
5
-
-
37248999354
-
Characterization of a new sensitive PCR assay for quantification of viral DNA isolated from patients with hepatitis B virus infections
-
V. Thibault, C. Pichoud, C. Mullen Characterization of a new sensitive PCR assay for quantification of viral DNA isolated from patients with hepatitis B virus infections J Clin Microbiol 45 2007 3948 3953
-
(2007)
J Clin Microbiol
, vol.45
, pp. 3948-3953
-
-
Thibault, V.1
Pichoud, C.2
Mullen, C.3
-
6
-
-
65449189713
-
The Cobas AmpliPrep-Cobas TaqMan real-time polymerase chain reaction assay fails to detect hepatitis C virus RNA in highly viremic genotype 4 clinical samples
-
S. Chevaliez, M. Bouvier-Alias, L. Castera The Cobas AmpliPrep-Cobas TaqMan real-time polymerase chain reaction assay fails to detect hepatitis C virus RNA in highly viremic genotype 4 clinical samples Hepatology 49 2009 1397 1398
-
(2009)
Hepatology
, vol.49
, pp. 1397-1398
-
-
Chevaliez, S.1
Bouvier-Alias, M.2
Castera, L.3
-
7
-
-
72949086417
-
Underestimation of hepatitis C virus genotype 4 RNA levels by the CobasAmpliPrep/CobasTaqMan assay
-
S. Chevaliez, J. Fix, A. Soulier Underestimation of hepatitis C virus genotype 4 RNA levels by the CobasAmpliPrep/CobasTaqMan assay Hepatology 50 2009 1681
-
(2009)
Hepatology
, vol.50
, pp. 1681
-
-
Chevaliez, S.1
Fix, J.2
Soulier, A.3
-
8
-
-
80052214210
-
Development of a second version of the Cobas AmpliPrep/Cobas TaqMan hepatitis C virus quantitative test with improved genotype inclusivity
-
J. Vermehren, G. Colucci, P. Gohl Development of a second version of the Cobas AmpliPrep/Cobas TaqMan hepatitis C virus quantitative test with improved genotype inclusivity J Clin Microbiol 49 2011 3309 3315
-
(2011)
J Clin Microbiol
, vol.49
, pp. 3309-3315
-
-
Vermehren, J.1
Colucci, G.2
Gohl, P.3
-
9
-
-
58149296156
-
EASL Clinical Practice Guidelines: Management of chronic hepatitis B
-
European Association for the Study of the Liver
-
European Association for the Study of the Liver EASL Clinical Practice Guidelines: management of chronic hepatitis B J Hepatol 50 2009 227 242
-
(2009)
J Hepatol
, vol.50
, pp. 227-242
-
-
-
10
-
-
79960453276
-
EASL Clinical Practice Guidelines: Management of hepatitis C virus infection
-
European Association for the Study of the Liver
-
European Association for the Study of the Liver EASL Clinical Practice Guidelines: management of hepatitis C virus infection J Hepatol 55 2011 245 264
-
(2011)
J Hepatol
, vol.55
, pp. 245-264
-
-
-
11
-
-
80053339008
-
An update on treatment of genotype 1 chronic hepatitis C virus infection: 2011 practice guideline by the American Association for the Study of Liver Diseases
-
M.G. Ghany, D.R. Nelson, D.B. Strader An update on treatment of genotype 1 chronic hepatitis C virus infection: 2011 practice guideline by the American Association for the Study of Liver Diseases Hepatology 54 2011 1433 1444
-
(2011)
Hepatology
, vol.54
, pp. 1433-1444
-
-
Ghany, M.G.1
Nelson, D.R.2
Strader, D.B.3
-
12
-
-
65449136656
-
Diagnosis, management, and treatment of hepatitis C: An update
-
M.G. Ghany, D.B. Strader, D.L. Thomas Diagnosis, management, and treatment of hepatitis C: an update Hepatology 49 2009 1335 1374
-
(2009)
Hepatology
, vol.49
, pp. 1335-1374
-
-
Ghany, M.G.1
Strader, D.B.2
Thomas, D.L.3
-
13
-
-
51049107683
-
Asian-Pacific consensus statement on the management of chronic hepatitis B: A 2008 update
-
Y.F. Liaw, N. Leung, J.H. Kao Asian-Pacific consensus statement on the management of chronic hepatitis B: a 2008 update Hepatol Int 2 2008 263 283
-
(2008)
Hepatol Int
, vol.2
, pp. 263-283
-
-
Liaw, Y.F.1
Leung, N.2
Kao, J.H.3
-
14
-
-
70349240414
-
Chronic hepatitis B: Update 2009
-
A.S. Lok, B.J. McMahon Chronic hepatitis B: update 2009 Hepatology 50 2009 661 662
-
(2009)
Hepatology
, vol.50
, pp. 661-662
-
-
Lok, A.S.1
McMahon, B.J.2
-
15
-
-
84860311682
-
The effect of using lower limit of quantitation (LLQ) vs lower limit of detection (LLD) for the definition of undetectable HCV RNA: Data from the RESPOND-2 and SPRINT-2 trials
-
E. Lawitz, F. Poordad, J.P. Bronowicki The effect of using lower limit of quantitation (LLQ) vs lower limit of detection (LLD) for the definition of undetectable HCV RNA: data from the RESPOND-2 and SPRINT-2 trials Hepatology 54 2011 442A
-
(2011)
Hepatology
, vol.54
-
-
Lawitz, E.1
Poordad, F.2
Bronowicki, J.P.3
-
16
-
-
84859162561
-
Clinical relevance of detectable but not quantifiable hepatitis C virus RNA during boceprevir or telaprevir treatment
-
P.R. Harrington, W. Zeng, L.K. Naeger Clinical relevance of detectable but not quantifiable hepatitis C virus RNA during boceprevir or telaprevir treatment Hepatology 55 2012 1048 1057
-
(2012)
Hepatology
, vol.55
, pp. 1048-1057
-
-
Harrington, P.R.1
Zeng, W.2
Naeger, L.K.3
-
17
-
-
65449117946
-
Hepatitis B virus surface antigen levels: A guide to sustained response to peginterferon alfa-2a in HBeAg-negative chronic hepatitis B
-
M.R. Brunetto, F. Moriconi, F. Bonino Hepatitis B virus surface antigen levels: a guide to sustained response to peginterferon alfa-2a in HBeAg-negative chronic hepatitis B Hepatology 49 2009 1141 1150
-
(2009)
Hepatology
, vol.49
, pp. 1141-1150
-
-
Brunetto, M.R.1
Moriconi, F.2
Bonino, F.3
-
18
-
-
65449123444
-
Early serum HBsAg drop: A strong predictor of sustained virological response to pegylated interferon alfa-2a in HBeAg-negative patients
-
R. Moucari, V. Mackiewicz, O. Lada Early serum HBsAg drop: a strong predictor of sustained virological response to pegylated interferon alfa-2a in HBeAg-negative patients Hepatology 49 2009 1151 1157
-
(2009)
Hepatology
, vol.49
, pp. 1151-1157
-
-
Moucari, R.1
MacKiewicz, V.2
Lada, O.3
-
19
-
-
77956592924
-
Kinetics of hepatitis B surface antigen decline during 3 years of telbivudine treatment in hepatitis B e antigen-positive patients
-
K. Wursthorn, M. Jung, A. Riva Kinetics of hepatitis B surface antigen decline during 3 years of telbivudine treatment in hepatitis B e antigen-positive patients Hepatology 52 2010 1611 1620
-
(2010)
Hepatology
, vol.52
, pp. 1611-1620
-
-
Wursthorn, K.1
Jung, M.2
Riva, A.3
-
20
-
-
80054724912
-
Hepatitis B surface antigen quantification: Why and how to use it in 2011 A core group report
-
H.L. Chan, A. Thompson, M. Martinot-Peignoux Hepatitis B surface antigen quantification: why and how to use it in 2011 A core group report J Hepatol 55 2011 1121 1131
-
(2011)
J Hepatol
, vol.55
, pp. 1121-1131
-
-
Chan, H.L.1
Thompson, A.2
Martinot-Peignoux, M.3
-
21
-
-
79959247715
-
A comparison of two assays for quantification of hepatitis B surface antigen in patients with chronic hepatitis B
-
M.J. Sonneveld, V. Rijckborst, C.A. Boucher A comparison of two assays for quantification of hepatitis B surface antigen in patients with chronic hepatitis B J Clin Virol 51 2011 175 178
-
(2011)
J Clin Virol
, vol.51
, pp. 175-178
-
-
Sonneveld, M.J.1
Rijckborst, V.2
Boucher, C.A.3
-
22
-
-
79952623084
-
Correlation between the Elecsys HBsAg II assay and the Architect assay for the quantification of hepatitis B surface antigen (HBsAg) in the serum
-
K. Wursthorn, J. Jaroszewicz, B.J. Zacher Correlation between the Elecsys HBsAg II assay and the Architect assay for the quantification of hepatitis B surface antigen (HBsAg) in the serum J Clin Virol 50 2011 292 296
-
(2011)
J Clin Virol
, vol.50
, pp. 292-296
-
-
Wursthorn, K.1
Jaroszewicz, J.2
Zacher, B.J.3
-
23
-
-
18444399247
-
Clinical utility of total HCV core antigen quantification: A new indirect marker of HCV replication
-
M. Bouvier-Alias, K. Patel, H. Dahari Clinical utility of total HCV core antigen quantification: a new indirect marker of HCV replication Hepatology 36 2002 211 218
-
(2002)
Hepatology
, vol.36
, pp. 211-218
-
-
Bouvier-Alias, M.1
Patel, K.2
Dahari, H.3
-
24
-
-
77952935565
-
New automated hepatitis C virus (HCV) core antigen assay as an alternative to real-time PCR for HCV RNA quantification
-
Y. Park, J.H. Lee, B.S. Kim New automated hepatitis C virus (HCV) core antigen assay as an alternative to real-time PCR for HCV RNA quantification J Clin Microbiol 48 2010 2253 2256
-
(2010)
J Clin Microbiol
, vol.48
, pp. 2253-2256
-
-
Park, Y.1
Lee, J.H.2
Kim, B.S.3
-
25
-
-
84860256294
-
Hepatitis C core Ag and its clinical applicability: Potential advantages and disadvantages for diagnosis and follow-up?
-
In press
-
S. Hosseini-Moghaddam, E. Iran-Pour, C. Rotstein Hepatitis C core Ag and its clinical applicability: potential advantages and disadvantages for diagnosis and follow-up? Rev Med Virol 2012 In press
-
(2012)
Rev Med Virol
-
-
Hosseini-Moghaddam, S.1
Iran-Pour, E.2
Rotstein, C.3
-
26
-
-
84856159397
-
Strong correlation between liver and serum levels of hepatitis C virus core antigen and RNA in chronically infected patients
-
V. Descamps, A. Op de Beeck, C. Plassart Strong correlation between liver and serum levels of hepatitis C virus core antigen and RNA in chronically infected patients J Clin Microbiol 50 2012 465 468
-
(2012)
J Clin Microbiol
, vol.50
, pp. 465-468
-
-
Descamps, V.1
Op De Beeck, A.2
Plassart, C.3
-
27
-
-
77956360948
-
Quantitative determination of hepatitis C core antigen in therapy monitoring for chronic hepatitis C
-
G.A. Moscato, G. Giannelli, B. Grandi Quantitative determination of hepatitis C core antigen in therapy monitoring for chronic hepatitis C Intervirology 54 2010 61 65
-
(2010)
Intervirology
, vol.54
, pp. 61-65
-
-
Moscato, G.A.1
Giannelli, G.2
Grandi, B.3
-
28
-
-
84855535685
-
HCV core antigen testing in HIV- and HBV-coinfected patients, and in HCV-infected patients on hemodialysis
-
I. Mederacke, A. Potthoff, D. Meyer-Olson HCV core antigen testing in HIV- and HBV-coinfected patients, and in HCV-infected patients on hemodialysis J Clin Virol 53 2012 110 115
-
(2012)
J Clin Virol
, vol.53
, pp. 110-115
-
-
Mederacke, I.1
Potthoff, A.2
Meyer-Olson, D.3
-
29
-
-
77950593167
-
Analytical evaluation of HCV core antigen and interest for HCV screening in haemodialysis patients
-
M. Miedouge, K. Saune, N. Kamar Analytical evaluation of HCV core antigen and interest for HCV screening in haemodialysis patients J Clin Virol 48 2010 18 21
-
(2010)
J Clin Virol
, vol.48
, pp. 18-21
-
-
Miedouge, M.1
Saune, K.2
Kamar, N.3
-
30
-
-
77950506807
-
Analytical performance characteristics and clinical utility of a novel assay for total hepatitis C virus core antigen quantification
-
R.S. Ross, S. Viazov, S. Salloum Analytical performance characteristics and clinical utility of a novel assay for total hepatitis C virus core antigen quantification J Clin Microbiol 48 2010 1161 1168
-
(2010)
J Clin Microbiol
, vol.48
, pp. 1161-1168
-
-
Ross, R.S.1
Viazov, S.2
Salloum, S.3
-
31
-
-
3042699358
-
Usefulness of dried blood samples for quantification and molecular characterization of HBV DNA
-
R. Jardi, F. Rodriguez-Frias, M. Buti Usefulness of dried blood samples for quantification and molecular characterization of HBV DNA Hepatology 40 2004 133 139
-
(2004)
Hepatology
, vol.40
, pp. 133-139
-
-
Jardi, R.1
Rodriguez-Frias, F.2
Buti, M.3
-
32
-
-
77950624042
-
Dried blood spot for hepatitis C virus serology and molecular testing
-
E. Tuaillon, A.M. Mondain, F. Meroueh Dried blood spot for hepatitis C virus serology and molecular testing Hepatology 51 2010 752 758
-
(2010)
Hepatology
, vol.51
, pp. 752-758
-
-
Tuaillon, E.1
Mondain, A.M.2
Meroueh, F.3
-
33
-
-
59349087275
-
Evaluation of the Abbott Real-Time HIV-1 quantitative assay with dried blood spot specimens
-
A. Marconi, M. Balestrieri, G. Comastri Evaluation of the Abbott Real-Time HIV-1 quantitative assay with dried blood spot specimens Clin Microbiol Infect 15 2009 93 97
-
(2009)
Clin Microbiol Infect
, vol.15
, pp. 93-97
-
-
Marconi, A.1
Balestrieri, M.2
Comastri, G.3
-
34
-
-
0017367852
-
Nucleotide sequence of bacteriophage phi X174 DNA
-
F. Sanger, G.M. Air, B.G. Barrell Nucleotide sequence of bacteriophage phi X174 DNA Nature 265 1977 687 695
-
(1977)
Nature
, vol.265
, pp. 687-695
-
-
Sanger, F.1
Air, G.M.2
Barrell, B.G.3
-
35
-
-
0023440258
-
A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides
-
J.M. Prober, G.L. Trainor, R.J. Dam A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides Science 238 1987 336 341
-
(1987)
Science
, vol.238
, pp. 336-341
-
-
Prober, J.M.1
Trainor, G.L.2
Dam, R.J.3
-
36
-
-
0026433002
-
High-speed DNA sequencing by capillary gel electrophoresis
-
L.M. Smith High-speed DNA sequencing by capillary gel electrophoresis Nature 349 1991 812 813
-
(1991)
Nature
, vol.349
, pp. 812-813
-
-
Smith, L.M.1
-
37
-
-
13144265739
-
Genome-wide association studies: Theoretical and practical concerns
-
W.Y. Wang, B.J. Barratt, D.G. Clayton Genome-wide association studies: theoretical and practical concerns Nature Rev Genet 6 2005 109 118
-
(2005)
Nature Rev Genet
, vol.6
, pp. 109-118
-
-
Wang, W.Y.1
Barratt, B.J.2
Clayton, D.G.3
-
38
-
-
65949104586
-
Genomewide association studies and human disease
-
J. Hardy, A. Singleton Genomewide association studies and human disease N Engl J Med 360 2009 1759 1768
-
(2009)
N Engl J Med
, vol.360
, pp. 1759-1768
-
-
Hardy, J.1
Singleton, A.2
-
39
-
-
77951731266
-
The pursuit of genome-wide association studies: Where are we now?
-
C.S. Ku, E.Y. Loy, Y. Pawitan The pursuit of genome-wide association studies: where are we now? J Hum Genet 55 2010 195 206
-
(2010)
J Hum Genet
, vol.55
, pp. 195-206
-
-
Ku, C.S.1
Loy, E.Y.2
Pawitan, Y.3
-
40
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomics
-
Z. Wang, M. Gerstein, M. Snyder RNA-Seq: a revolutionary tool for transcriptomics Nat Rev Genet 10 2009 57 63
-
(2009)
Nat Rev Genet
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
41
-
-
72849144434
-
Sequencing technologies: The next generation
-
M.L. Metzker Sequencing technologies: the next generation Nat Rev Genet 11 2010 31 46
-
(2010)
Nat Rev Genet
, vol.11
, pp. 31-46
-
-
Metzker, M.L.1
-
43
-
-
84889495087
-
Applied biosystems SOLiD system: Ligation-based sequencing
-
M. Janits, Wiley Hoboken, NJ
-
V. Pandey, R.C. Nutter, E. Prediger Applied biosystems SOLiD system: ligation-based sequencing M. Janits, Next-generation genome sequencing Towards personnalized medicine 2008 Wiley Hoboken, NJ 29 42
-
(2008)
Next-generation Genome Sequencing Towards Personnalized Medicine
, pp. 29-42
-
-
Pandey, V.1
Nutter, R.C.2
Prediger, E.3
-
44
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
M. Margulies, M. Egholm, W.E. Altman Genome sequencing in microfabricated high-density picolitre reactors Nature 437 2005 376 380
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
-
45
-
-
79960597679
-
An integrated semiconductor device enabling non-optical genome sequencing
-
J.M. Rothberg, W. Hinz, T.M. Rearick An integrated semiconductor device enabling non-optical genome sequencing Nature 475 2011 348 352
-
(2011)
Nature
, vol.475
, pp. 348-352
-
-
Rothberg, J.M.1
Hinz, W.2
Rearick, T.M.3
-
46
-
-
58149234737
-
Real-time DNA sequencing from single polymerase molecules
-
J. Eid, A. Fehr, J. Gray Real-time DNA sequencing from single polymerase molecules Science 323 2009 133 138
-
(2009)
Science
, vol.323
, pp. 133-138
-
-
Eid, J.1
Fehr, A.2
Gray, J.3
-
47
-
-
65449144325
-
Evaluation of next-generation sequencing platforms for population targeted sequencing studies
-
O. Harismendy, P.C. Ng, R.L. Strausberg Evaluation of next-generation sequencing platforms for population targeted sequencing studies Genome Biol 10 2009 R32
-
(2009)
Genome Biol
, vol.10
, pp. 32
-
-
Harismendy, O.1
Ng, P.C.2
Strausberg, R.L.3
-
48
-
-
58149200962
-
Comparing platforms for C elegans mutant identification using high-throughput whole-genome sequencing
-
Y. Shen, S. Sarin, Y. Liu Comparing platforms for C elegans mutant identification using high-throughput whole-genome sequencing PloS One 3 2008 e4012
-
(2008)
PloS One
, vol.3
, pp. 4012
-
-
Shen, Y.1
Sarin, S.2
Liu, Y.3
-
49
-
-
70349162750
-
High throughput sequencing in mice: A platform comparison identifies a preponderance of cryptic SNPs
-
N.A. Walter, D. Bottomly, T. Laderas High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs BMC Genomics 10 2009 379
-
(2009)
BMC Genomics
, vol.10
, pp. 379
-
-
Walter, N.A.1
Bottomly, D.2
Laderas, T.3
-
50
-
-
79956066785
-
Comparison of sequence reads obtained from three next-generation sequencing platforms
-
S. Suzuki, N. Ono, C. Furusawa Comparison of sequence reads obtained from three next-generation sequencing platforms PloS One 6 2011 e19534
-
(2011)
PloS One
, vol.6
, pp. 19534
-
-
Suzuki, S.1
Ono, N.2
Furusawa, C.3
-
51
-
-
52649157765
-
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
-
J.C. Dohm, C. Lottaz, T. Borodina Substantial biases in ultra-short read data sets from high-throughput DNA sequencing Nucleic Acids Res 36 2008 e105
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 105
-
-
Dohm, J.C.1
Lottaz, C.2
Borodina, T.3
-
52
-
-
77955246609
-
Evaluation of oligonucleotide sequence capture arrays and comparison of next-generation sequencing platforms for use in molecular diagnostics
-
N. Hoppman-Chaney, L.M. Peterson, E.W. Klee Evaluation of oligonucleotide sequence capture arrays and comparison of next-generation sequencing platforms for use in molecular diagnostics Clin Chem 56 2010 1297 1306
-
(2010)
Clin Chem
, vol.56
, pp. 1297-1306
-
-
Hoppman-Chaney, N.1
Peterson, L.M.2
Klee, E.W.3
-
53
-
-
79956044149
-
Accuracy and quality assessment of 454 GS-FLX titanium pyrosequencing
-
A. Gilles, E. Meglecz, N. Pech Accuracy and quality assessment of 454 GS-FLX titanium pyrosequencing BMC Genomics 12 2011 245
-
(2011)
BMC Genomics
, vol.12
, pp. 245
-
-
Gilles, A.1
Meglecz, E.2
Pech, N.3
-
54
-
-
0031978181
-
Base-calling of automated sequencer traces using Phred II. Error probabilities
-
B. Ewing, P. Green Base-calling of automated sequencer traces using Phred II. Error probabilities Genome Res 8 1998 186 194
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
55
-
-
0031955518
-
Base-calling of automated sequencer traces using Phred I. Accuracy assessment
-
B. Ewing, L. Hillier, M.C. Wendl Base-calling of automated sequencer traces using Phred I. Accuracy assessment Genome Res 8 1998 175 185
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
-
56
-
-
0031955430
-
Estimation of errors in "raw" DNA sequences: A validation study
-
P. Richterich Estimation of errors in "raw" DNA sequences: a validation study Genome Res 8 1998 251 259
-
(1998)
Genome Res
, vol.8
, pp. 251-259
-
-
Richterich, P.1
-
57
-
-
67650908913
-
Managing and analyzing next-generation sequence data
-
B.G. Richter, D.P. Sexton Managing and analyzing next-generation sequence data PLoS Computat Biol 5 2009 e1000369
-
(2009)
PLoS Computat Biol
, vol.5
, pp. 1000369
-
-
Richter, B.G.1
Sexton, D.P.2
-
58
-
-
0034727107
-
An SNP map of the human genome generated by reduced representation shotgun sequencing
-
D. Altshuler, V.J. Pollara, C.R. Cowles An SNP map of the human genome generated by reduced representation shotgun sequencing Nature 407 2000 513 516
-
(2000)
Nature
, vol.407
, pp. 513-516
-
-
Altshuler, D.1
Pollara, V.J.2
Cowles, C.R.3
-
59
-
-
34547643929
-
Characterization of mutation spectra with ultra-deep pyrosequencing: Application to HIV-1 drug resistance
-
C. Wang, Y. Mitsuya, B. Gharizadeh Characterization of mutation spectra with ultra-deep pyrosequencing: application to HIV-1 drug resistance Genome Res 17 2007 1195 1201
-
(2007)
Genome Res
, vol.17
, pp. 1195-1201
-
-
Wang, C.1
Mitsuya, Y.2
Gharizadeh, B.3
-
60
-
-
66249094578
-
Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo
-
A.M. Tsibris, B. Korber, R. Arnaout Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo PloS One 4 2009 e5683
-
(2009)
PloS One
, vol.4
, pp. 5683
-
-
Tsibris, A.M.1
Korber, B.2
Arnaout, R.3
-
61
-
-
78651228163
-
The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time-an ultra-deep approach
-
J. Archer, A. Rambaut, B.E. Taillon The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time-an ultra-deep approach PLoS Comput Biol 6 2010 e1001022
-
(2010)
PLoS Comput Biol
, vol.6
, pp. 1001022
-
-
Archer, J.1
Rambaut, A.2
Taillon, B.E.3
-
62
-
-
77952299935
-
Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1
-
A.F. Poon, L.C. Swenson, W.W. Dong Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1 Molecular Biol Evol 27 2010 819 832
-
(2010)
Molecular Biol Evol
, vol.27
, pp. 819-832
-
-
Poon, A.F.1
Swenson, L.C.2
Dong, W.W.3
-
63
-
-
79960717109
-
Detection of minority resistance during early HIV-1 infection: Natural variation and spurious detection rather than transmission and evolution of multiple viral variants
-
S. Gianella, W. Delport, M.E. Pacold Detection of minority resistance during early HIV-1 infection: natural variation and spurious detection rather than transmission and evolution of multiple viral variants J Virol 85 2011 8359 8367
-
(2011)
J Virol
, vol.85
, pp. 8359-8367
-
-
Gianella, S.1
Delport, W.2
Pacold, M.E.3
-
64
-
-
84858998240
-
Ultra-deep pyrosequencing, a powerful new tool to study HBV resistance to nucleoside/nucleotide analogues, identifies pre-existing HBV variants bearing resistance mutations and characterizes their on-treatment kinetics
-
C. Rodriguez, C. Chevaliez, P. Bensadoun Ultra-deep pyrosequencing, a powerful new tool to study HBV resistance to nucleoside/nucleotide analogues, identifies pre-existing HBV variants bearing resistance mutations and characterizes their on-treatment kinetics Hepatology 52 2011 117A
-
(2011)
Hepatology
, vol.52
-
-
Rodriguez, C.1
Chevaliez, C.2
Bensadoun, P.3
-
65
-
-
82955172365
-
Molecular characterization of HCV resistance to telaprevir by means of ultra-deep pyrosequencing: Preexisting resistant variants and dynamics of resistant populations
-
S. Chevaliez, C. Rodriguez, A. Soulier Molecular characterization of HCV resistance to telaprevir by means of ultra-deep pyrosequencing: preexisting resistant variants and dynamics of resistant populations J Hepatol 54 2011 S30
-
(2011)
J Hepatol
, vol.54
, pp. 30
-
-
Chevaliez, S.1
Rodriguez, C.2
Soulier, A.3
-
66
-
-
84860276589
-
HIV-1 coreceptor usage prediction by "ultra-deep pyrosequencing" increases the rate of patients treated with success by CCR5 antagonists
-
C. Rodriguez, C. Soulie, A. Marcelin HIV-1 coreceptor usage prediction by "ultra-deep pyrosequencing" increases the rate of patients treated with success by CCR5 antagonists Antiviral Ther 16 2011 A100
-
(2011)
Antiviral Ther
, vol.16
, pp. 100
-
-
Rodriguez, C.1
Soulie, C.2
Marcelin, A.3
-
67
-
-
80053577592
-
Changes in serum levels of HBV DNA and alanine aminotransferase determine risk for hepatocellular carcinoma
-
C.F. Chen, W.C. Lee, H.I. Yang Changes in serum levels of HBV DNA and alanine aminotransferase determine risk for hepatocellular carcinoma Gastroenterology 141 2011 1240 1248
-
(2011)
Gastroenterology
, vol.141
, pp. 1240-1248
-
-
Chen, C.F.1
Lee, W.C.2
Yang, H.I.3
-
68
-
-
66149187115
-
Hepatitis B virus DNA levels and outcomes in chronic hepatitis B
-
C.J. Chen, H.I. Yang, U.H. Iloeje Hepatitis B virus DNA levels and outcomes in chronic hepatitis B Hepatology 49 2009 S72 S84
-
(2009)
Hepatology
, vol.49
-
-
Chen, C.J.1
Yang, H.I.2
Iloeje, U.H.3
-
69
-
-
78751575977
-
The importance of HBV genotype in HBeAg-positive chronic hepatitis B patients in whom sustained response is pursued
-
E.H. Buster, H.L. Janssen The importance of HBV genotype in HBeAg-positive chronic hepatitis B patients in whom sustained response is pursued J Hepatol 54 2011 395 396
-
(2011)
J Hepatol
, vol.54
, pp. 395-396
-
-
Buster, E.H.1
Janssen, H.L.2
-
70
-
-
77249123832
-
Is response to antiviral treatment influenced by hepatitis B virus genotype?
-
S. Raimondi, P. Maisonneuve, S. Bruno Is response to antiviral treatment influenced by hepatitis B virus genotype? J Hepatol 52 2010 441 449
-
(2010)
J Hepatol
, vol.52
, pp. 441-449
-
-
Raimondi, S.1
Maisonneuve, P.2
Bruno, S.3
-
71
-
-
77957331059
-
Tenofovir and entecavir are the most effective antiviral agents for chronic hepatitis B: A systematic review and Bayesian meta-analyses
-
G. Woo, G. Tomlinson, Y. Nishikawa Tenofovir and entecavir are the most effective antiviral agents for chronic hepatitis B: a systematic review and Bayesian meta-analyses Gastroenterology 139 2010 1218 1229
-
(2010)
Gastroenterology
, vol.139
, pp. 1218-1229
-
-
Woo, G.1
Tomlinson, G.2
Nishikawa, Y.3
-
72
-
-
79960727726
-
Entecavir treatment for chronic hepatitis B: Adaptation is not needed for the majority of naive patients with a partial virological response
-
R. Zoutendijk, J.G. Reijnders, A. Brown Entecavir treatment for chronic hepatitis B: adaptation is not needed for the majority of naive patients with a partial virological response Hepatology 54 2011 443 451
-
(2011)
Hepatology
, vol.54
, pp. 443-451
-
-
Zoutendijk, R.1
Reijnders, J.G.2
Brown, A.3
-
73
-
-
38749126832
-
Virologic monitoring of hepatitis B virus therapy in clinical trials and practice: Recommendations for a standardized approach
-
J.M. Pawlotsky, G. Dusheiko, A. Hatzakis Virologic monitoring of hepatitis B virus therapy in clinical trials and practice: recommendations for a standardized approach Gastroenterology 134 2008 405 415
-
(2008)
Gastroenterology
, vol.134
, pp. 405-415
-
-
Pawlotsky, J.M.1
Dusheiko, G.2
Hatzakis, A.3
-
74
-
-
77949514845
-
Hepatitis C virus (HCV) genotype 1 subtype identification in new HCV drug development and future clinical practice
-
S. Chevaliez, M. Bouvier-Alias, R. Brillet Hepatitis C virus (HCV) genotype 1 subtype identification in new HCV drug development and future clinical practice PLoS One 4 2009 e8209
-
(2009)
PLoS One
, vol.4
, pp. 8209
-
-
Chevaliez, S.1
Bouvier-Alias, M.2
Brillet, R.3
-
76
-
-
79955103901
-
Treatment failure and resistance with direct-acting antiviral drugs against hepatitis C virus
-
J.M. Pawlotsky Treatment failure and resistance with direct-acting antiviral drugs against hepatitis C virus Hepatology 53 2011 1742 1751
-
(2011)
Hepatology
, vol.53
, pp. 1742-1751
-
-
Pawlotsky, J.M.1
-
77
-
-
79960735084
-
Evolution of treatment-emergent resistant variants in telaprevir phase 3 clinical trials
-
J.C. Sullivan, S. De Meyer, D.J. Bartels Evolution of treatment-emergent resistant variants in telaprevir phase 3 clinical trials J Hepatol 54 2011 S4
-
(2011)
J Hepatol
, vol.54
, pp. 4
-
-
Sullivan, J.C.1
De Meyer, S.2
Bartels, D.J.3
-
78
-
-
82955182885
-
Boceprevir resistance-associated variants (RAVS) are observed more frequently in HCV (GT1)-infected patients with poor response to peginterferon α-2b/ribavirin
-
S. Zeuzem, R.J. Barnard, J.A. Howe Boceprevir resistance-associated variants (RAVS) are observed more frequently in HCV (GT1)-infected patients with poor response to peginterferon α-2b/ribavirin J Hepatol 54 2011 S4 S5
-
(2011)
J Hepatol
, vol.54
-
-
Zeuzem, S.1
Barnard, R.J.2
Howe, J.A.3
|