-
1
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
Birney E, Stamatoyannopoulos JA, Dutta A, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 2007;447:799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
-
2
-
-
38649099445
-
High-Resolution Mapping and Characterization of Open Chromatin across the Genome
-
DOI 10.1016/j.cell.2007.12.014, PII S0092867407016133
-
Boyle AP, Davis S, Shulha HP, et al. High-resolution mapping and characterization of open chromatin across the genome. Cell 2008;132:311-22. (Pubitemid 351172431)
-
(2008)
Cell
, vol.132
, Issue.2
, pp. 311-322
-
-
Boyle, A.P.1
Davis, S.2
Shulha, H.P.3
Meltzer, P.4
Margulies, E.H.5
Weng, Z.6
Furey, T.S.7
Crawford, G.E.8
-
3
-
-
34250369627
-
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
-
DOI 10.1101/gr.5533506
-
Giresi PG, Kim J, McDaniell RM, et al. FAIRE (formaldehyde-assisted isolation of regulatory elements) isolates active regulatory elements from human chromatin. Genome Res 2007;17:877-85. (Pubitemid 46919722)
-
(2007)
Genome Research
, vol.17
, Issue.6
, pp. 877-885
-
-
Giresi, P.G.1
Kim, J.2
McDaniell, R.M.3
Iyer, V.R.4
Lieb, J.D.5
-
4
-
-
54949147307
-
F-Seq: A feature density estimator for high-throughput sequence tags
-
Boyle AP, Guinney J, Crawford GE, et al. F-Seq: a feature density estimator for high-throughput sequence tags. Bioinformatics 2008;24:2537-8.
-
(2008)
Bioinformatics
, vol.24
, pp. 2537-2538
-
-
Boyle, A.P.1
Guinney, J.2
Crawford, G.E.3
-
5
-
-
0038005018
-
DAVID: Database for annotation, visualization, and integrated discovery
-
Dennis G Jr, Sherman BT, Hosack DA, et al. DAVID: database for annotation, visualization, and integrated discovery. Genome Biol 2003;4:P3.
-
(2003)
Genome Biol
, vol.4
-
-
Dennis Jr., G.1
Sherman, B.T.2
Hosack, D.A.3
-
6
-
-
77649086970
-
A map of open chromatin in human pancreatic islets
-
Gaulton KJ, Nammo T, Pasquali L, et al. A map of open chromatin in human pancreatic islets. Nat Genet 2010;42:255-9.
-
(2010)
Nat Genet
, vol.42
, pp. 255-259
-
-
Gaulton, K.J.1
Nammo, T.2
Pasquali, L.3
-
8
-
-
0032996624
-
Molecular cloning and transmembrane structure of hCLCA2 from human lung, trachea, and mammary gland
-
Gruber AD, Schreur KD, Ji HL, et al. Molecular cloning and transmembrane structure of hCLCA2 from human lung, trachea, and mammary gland. Am J Physiol 1999;276:C1261-70. (Pubitemid 29323390)
-
(1999)
American Journal of Physiology - Cell Physiology
, vol.276
, Issue.6
-
-
Gruber, A.D.1
Schreur, K.D.2
Ji, H.-L.3
Fuller, C.M.4
Pauli, B.U.5
-
9
-
-
1242341461
-
Calciun-activated Chloride Channel-2 in Human Epithelia
-
Connon CJ, Yamasaki K, Kawasaki S, et al. Calcium-activated chloride channel-2 in human epithelia. J Histochem Cytochem 2004;52:415-18. (Pubitemid 38229107)
-
(2004)
Journal of Histochemistry and Cytochemistry
, vol.52
, Issue.3
, pp. 415-418
-
-
Connon, C.J.1
Yamasaki, K.2
Kawasaki, S.3
Quantock, A.J.4
Koizumi, N.5
Kinoshita, S.6
-
10
-
-
9844246984
-
A novel epithelial-expressed ETS gene, ELF3: Human and murine cDNA sequences, murine genomic organization, human mapping to 1q32.2 and expression in tissues and cancer
-
Tymms MJ, Ng AY, Thomas RS, et al. A novel epithelial-expressed ETS gene, ELF3: human and murine cDNA sequences, murine genomic organization, human mapping to 1q32.2 and expression in tissues and cancer. Oncogene 1997; 15:2449-62. (Pubitemid 27503531)
-
(1997)
Oncogene
, vol.15
, Issue.20
, pp. 2449-2462
-
-
Tymms, M.J.1
Ng, A.Y.N.2
Thomas, R.S.3
Schutte, B.C.4
Zhou, J.5
Eyre, H.J.6
Sutherland, G.R.7
Seth, A.8
Rosenberg, M.9
Papas, T.10
Debouck, C.11
Kola, I.12
-
11
-
-
0027299626
-
cDNA cloning and transcriptional properties of a novel GC box-binding protein, BTEB2
-
Sogawa K, Imataka H, Yamasaki Y, et al. cDNA cloning and transcriptional properties of a novel GC box-binding protein, BTEB2. Nucleic Acids Res 1993;21:1527-32. (Pubitemid 23146316)
-
(1993)
Nucleic Acids Research
, vol.21
, Issue.7
, pp. 1527-1532
-
-
Sogawa, K.1
Imataka, H.2
Yamasaki, Y.3
Kusume, H.4
Abe, H.5
Fujii-Kuriyama, Y.6
-
12
-
-
0030589639
-
The human GATA-6 gene: Structure, chromosomal location, and regulation of expression by tissue-specific and mitogen-responsive signals
-
DOI 10.1006/geno.1996.0630
-
Suzuki E, Evans T, Lowry J, et al. The human GATA-6 gene: structure, chromosomal location, and regulation of expression by tissue-specific and mitogen-responsive signals. Genomics 1996;38:283-90. (Pubitemid 27030116)
-
(1996)
Genomics
, vol.38
, Issue.3
, pp. 283-290
-
-
Suzuki, E.1
Evans, T.2
Lowry, J.3
Truong, L.4
Bell, D.W.5
Testa, J.R.6
Walsh, K.7
-
13
-
-
0024093392
-
Expression pattern of two related cystic fibrosis-associated calcium-binding proteins in normal and abnormal tissues
-
Wilkinson MM, Busuttil A, Hayward C, et al. Expression pattern of two related cystic fibrosis-associated calcium-binding proteins in normal and abnormal tissues. J Cell Sci 1988;91:221-30.
-
(1988)
J Cell Sci
, vol.91
, pp. 221-230
-
-
Wilkinson, M.M.1
Busuttil, A.2
Hayward, C.3
-
14
-
-
0026474831
-
Complex pattern of the myelo-monocytic differentiation antigens MRP8 and MRP14 during chronic airway inflammation
-
Roth J, Teigelkamp S, Wilke M, et al. Complex pattern of the myelo-monocytic differentiation antigens MRP8 and MRP14 during chronic airway inflammation. Immunobiology 1992;186:304-14.
-
(1992)
Immunobiology
, vol.186
, pp. 304-314
-
-
Roth, J.1
Teigelkamp, S.2
Wilke, M.3
-
15
-
-
0027999172
-
Increased coexpression of CFTR and S100 calcium binding proteins MRP8 and MRP14 mRNAs in cystic fibrosis human tracheal gland cells
-
Renaud W, Merten M, Figarella C. Increased coexpression of CFTR and S100 calcium binding proteins MRP8 and MRP14 mRNAs in cystic fibrosis human tracheal gland cells. Biochem Biophys Res Commun 1994;201:1518-25.
-
(1994)
Biochem Biophys Res Commun
, vol.201
, pp. 1518-1525
-
-
Renaud, W.1
Merten, M.2
Figarella, C.3
-
16
-
-
40049100981
-
Different expression ratio of S100A8/A9 and S100A12 in acute and chronic lung diseases
-
Lorenz E, Muhlebach MS, Tessier PA, et al. Different expression ratio of S100A8/A9 and S100A12 in acute and chronic lung diseases. Respir Med 2008; 102:567-73.
-
(2008)
Respir Med
, vol.102
, pp. 567-573
-
-
Lorenz, E.1
Muhlebach, M.S.2
Tessier, P.A.3
-
17
-
-
77957113600
-
A large-scale, consortium-based genomewide association study of asthma
-
Moffatt MF, Gut IG, Demenais F, et al. A large-scale, consortium-based genomewide association study of asthma. N Engl J Med 2010;363:1211-21.
-
(2010)
N Engl J Med
, vol.363
, pp. 1211-1221
-
-
Moffatt, M.F.1
Gut, I.G.2
Demenais, F.3
-
18
-
-
2542584654
-
Detection of functional DNA motifs via statistical over-representation
-
DOI 10.1093/nar/gkh299
-
Frith MC, Fu Y, Yu L, et al. Detection of functional DNA motifs via statistical overrepresentation. Nucleic Acids Res 2004;32:1372-81. (Pubitemid 38854738)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.4
, pp. 1372-1381
-
-
Frith, M.C.1
Fu, Y.2
Yu, L.3
Chen, J.-F.4
Hansen, U.5
Weng, Z.6
-
19
-
-
0033529654
-
The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
-
DOI 10.1016/S0092-8674(00)81967-4
-
Bell AC, West AG, Felsenfeld G. The protein CTCF is required for the enhancer blocking activity of vertebrate insulators. Cell 1999;98:387-96. (Pubitemid 29380573)
-
(1999)
Cell
, vol.98
, Issue.3
, pp. 387-396
-
-
Bell, A.C.1
West, A.G.2
Felsenfeld, G.3
-
20
-
-
79952267284
-
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
-
Boyle AP, Song L, Lee BK, et al. High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells. Genome Res 2011;21: 456-64.
-
(2011)
Genome Res
, vol.21
, pp. 456-464
-
-
Boyle, A.P.1
Song, L.2
Lee, B.K.3
-
21
-
-
33748259774
-
CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus
-
DOI 10.1101/gad.399506
-
Splinter E, Heath H, Kooren J, et al. CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus. Genes Dev 2006;20:2349-54. (Pubitemid 44320383)
-
(2006)
Genes and Development
, vol.20
, Issue.17
, pp. 2349-2354
-
-
Splinter, E.1
Heath, H.2
Kooren, J.3
Palstra, R.-J.4
Klous, P.5
Grosveld, F.6
Galjart, N.7
De Laat, W.8
-
22
-
-
38849121606
-
Cohesins functionally associate with CTCF on mammalian chromosome arms
-
Parelho V, Hadjur S, Spivakov M, et al. Cohesins functionally associate with CTCF on mammalian chromosome arms. Cell 2008;132:422-33.
-
(2008)
Cell
, vol.132
, pp. 422-433
-
-
Parelho, V.1
Hadjur, S.2
Spivakov, M.3
-
23
-
-
39149121436
-
Cohesin mediates transcriptional insulation by CCCTC-binding factor
-
DOI 10.1038/nature06634, PII NATURE06634
-
Wendt KS, Yoshida K, Itoh T, et al. Cohesin mediates transcriptional insulation by CCCTC-binding factor. Nature 2008;451:796-801. (Pubitemid 351253176)
-
(2008)
Nature
, vol.451
, Issue.7180
, pp. 796-801
-
-
Wendt, K.S.1
Yoshida, K.2
Itoh, T.3
Bando, M.4
Koch, B.5
Schirghuber, E.6
Tsutsumi, S.7
Nagae, G.8
Ishihara, K.9
Mishiro, T.10
Yahata, K.11
Imamoto, F.12
Aburatani, H.13
Nakao, M.14
Imamoto, N.15
Maeshima, K.16
Shirahige, K.17
Peters, J.-M.18
-
24
-
-
12944304160
-
A major site of expression of the ets transcription factor Elf5 is epithelia of exocrine glands
-
DOI 10.1007/s00418-004-0713-x
-
Lapinskas EJ, Palmer J, Ricardo S, et al. A major site of expression of the Ets transcription factor ELF5 is epithelia of exocrine glands. Histochem Cell Biol 2004;122:521-6. (Pubitemid 40174589)
-
(2004)
Histochemistry and Cell Biology
, vol.122
, Issue.6
, pp. 521-526
-
-
Lapinskas, E.J.1
Palmer, J.2
Ricardo, S.3
Hertzog, P.J.4
Hammacher, A.5
Pritchard, M.A.6
-
25
-
-
33750438123
-
The Foxa family of transcription factors in development and metabolism
-
DOI 10.1007/s00018-006-6095-6
-
Friedman JR, Kaestner KH. The FOXA family of transcription factors in development and metabolism. Cell Mol Life Sci 2006;63:2317-28. (Pubitemid 44653042)
-
(2006)
Cellular and Molecular Life Sciences
, vol.63
, Issue.19-20
, pp. 2317-2328
-
-
Friedman, J.R.1
Kaestner, K.H.2
-
26
-
-
77956649260
-
The FOXA factors in organogenesis and differentiation
-
Kaestner KH. The FOXA factors in organogenesis and differentiation. Curr Opin Genet Dev 2010;20:527-32.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 527-532
-
-
Kaestner, K.H.1
-
27
-
-
77957956552
-
An intronic enhancer driven by NF-kappaB contributes to transcriptional regulation of peptidylarginine deiminase type I gene in human keratinocytes
-
Ying S, Kojima T, Kawada A, et al. An intronic enhancer driven by NF-kappaB contributes to transcriptional regulation of peptidylarginine deiminase type I gene in human keratinocytes. J Invest Dermatol 2010;130:2543-52.
-
(2010)
J Invest Dermatol
, vol.130
, pp. 2543-2552
-
-
Ying, S.1
Kojima, T.2
Kawada, A.3
-
28
-
-
33947289026
-
Conserved elements within first intron of aquaporin-5 (Aqp5) function as transcriptional enhancers
-
DOI 10.1016/j.bbrc.2007.02.076, PII S0006291X07003385
-
Flodby P, Zhou B, Ann DK, et al. Conserved elements within first intron of aquaporin-5 (AQP5) function as transcriptional enhancers. Biochem Biophys Res Commun 2007;356:26-31. (Pubitemid 46420686)
-
(2007)
Biochemical and Biophysical Research Communications
, vol.356
, Issue.1
, pp. 26-31
-
-
Flodby, P.1
Zhou, B.2
Ann, D.K.3
Kim, K.-J.4
Minoo, P.5
Crandall, E.D.6
Borok, Z.7
-
29
-
-
0036258462
-
Dissection of a complex enhancer element: Maintenance of keratinocyte specificity but loss of differentiation specificity
-
DOI 10.1128/MCB.22.12.4293-4308.2002
-
Kaufman CK, Sinha S, Bolotin D, et al. Dissection of a complex enhancer element: maintenance of keratinocyte specificity but loss of differentiation specificity. Mol Cell Biol 2002;22:4293-308. (Pubitemid 34556597)
-
(2002)
Molecular and Cellular Biology
, vol.22
, Issue.12
, pp. 4293-4308
-
-
Kaufman, C.K.1
Sinha, S.2
Bolotin, D.3
Fan, J.4
Fuchs, E.5
-
30
-
-
63449101907
-
A genome-wide association study in chronic obstructive pulmonary disease (COPD): Identification of two major susceptibility loci
-
Pillai SG, Ge D, Zhu G, et al. A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci. PLoS Genet 2009;5:e1000421.
-
(2009)
PLoS Genet
, vol.5
-
-
Pillai, S.G.1
Ge, D.2
Zhu, G.3
-
31
-
-
70149094161
-
Genome-wide association study implicates chromosome 9q21.31 as a susceptibility locus for asthma in Mexican children
-
Hancock DB, Romieu I, Shi M, et al. Genome-wide association study implicates chromosome 9q21.31 as a susceptibility locus for asthma in Mexican children. PLoS Genet 2009;5:e1000623.
-
(2009)
PLoS Genet
, vol.5
-
-
Hancock, D.B.1
Romieu, I.2
Shi, M.3
-
32
-
-
78649724603
-
Unifying candidate gene and GWAS approaches in asthma
-
Michel S, Liang L, Depner M, et al. Unifying candidate gene and GWAS approaches in asthma. PLoS One 2010;5:e13894.
-
(2010)
PLoS One
, vol.5
-
-
Michel, S.1
Liang, L.2
Depner, M.3
-
33
-
-
75849162175
-
Genome-wide association study of asthma identifies RAD50-IL13 and HLA-DR/DQ regions
-
Li X, Howard TD, Zheng SL, et al. Genome-wide association study of asthma identifies RAD50-IL13 and HLA-DR/DQ regions. J Allergy Clin Immunol 2010;125:328-35.e11.
-
(2010)
J Allergy Clin Immunol
, vol.125
-
-
Li, X.1
Howard, T.D.2
Zheng, S.L.3
-
34
-
-
50449095436
-
Genome-wide association study identifies ANXA11 as a new susceptibility locus for sarcoidosis
-
Hofmann S, Franke A, Fischer A, et al. Genome-wide association study identifies ANXA11 as a new susceptibility locus for sarcoidosis. Nat Genet 2008;40:1103-6.
-
(2008)
Nat Genet
, vol.40
, pp. 1103-1106
-
-
Hofmann, S.1
Franke, A.2
Fischer, A.3
-
35
-
-
79957588506
-
Genome-wide association and linkage identify modifier loci of lung disease severity in cystic fibrosis at 11p13 and 20q13.2
-
Wright FA, Strug LJ, Doshi VK, et al. Genome-wide association and linkage identify modifier loci of lung disease severity in cystic fibrosis at 11p13 and 20q13.2. Nat Genet 2011;43:539-46.
-
(2011)
Nat Genet
, vol.43
, pp. 539-546
-
-
Wright, F.A.1
Strug, L.J.2
Doshi, V.K.3
-
36
-
-
0027958441
-
+ channel is made of three homologous subunits
-
DOI 10.1038/367463a0
-
Canessa CM, Schild L, Buell G, et al. Amiloride-sensitive epithelial Na+ channel is made of three homologous subunits. Nature 1994;367:463-7. (Pubitemid 24046048)
-
(1994)
Nature
, vol.367
, Issue.6462
, pp. 463-467
-
-
Canessa, C.M.1
Schild, L.2
Buell, G.3
Thorens, B.4
Gautschi, I.5
Horisberger, J.-D.6
Rossier, B.C.7
-
37
-
-
2442718786
-
+ absorption produces cystic fibrosis-like lung disease in mice
-
DOI 10.1038/nm1028
-
Mall M, Grubb BR, Harkema JR, et al. Increased airway epithelial Na+ absorption produces cystic fibrosis-like lung disease in mice. Nat Med 2004;10: 487-93. (Pubitemid 38667907)
-
(2004)
Nature Medicine
, vol.10
, Issue.5
, pp. 487-493
-
-
Mall, M.1
Grubb, B.R.2
Harkema, J.R.3
O'Neal, W.K.4
Boucher, R.C.5
-
38
-
-
41749115751
-
+ channel-overexpressing mice
-
DOI 10.1164/rccm.200708-1233OC
-
Mall MA, Harkema JR, Trojanek JB, et al. Development of chronic bronchitis and emphysema in beta-epithelial Na+ channel-overexpressing mice. Am J Respir Crit Care Med 2008;177:730-42. (Pubitemid 351490560)
-
(2008)
American Journal of Respiratory and Critical Care Medicine
, vol.177
, Issue.7
, pp. 730-742
-
-
Mall, M.A.1
Harkema, J.R.2
Trojanek, J.B.3
Treis, D.4
Livraghi, A.5
Schubert, S.6
Zhou, Z.7
Kreda, S.M.8
Tilley, S.L.9
Hudson, E.J.10
O'Neal, W.K.11
Boucher, R.C.12
|