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Volumn 4, Issue 3, 2012, Pages 237-246

Multiscale models of thrombogenesis

Author keywords

[No Author keywords available]

Indexed keywords

BLOOD CLOTTING FACTOR 7; FIBRIN; THROMBIN;

EID: 84859826174     PISSN: 19395094     EISSN: 1939005X     Source Type: Journal    
DOI: 10.1002/wsbm.1160     Document Type: Article
Times cited : (27)

References (69)
  • 3
    • 67849110024 scopus 로고    scopus 로고
    • Systems biology to predict blood function.
    • Diamond SL. Systems biology to predict blood function. J Thromb Haemost 2009, 7 Suppl 1:177-180.
    • (2009) J Thromb Haemost , Issue.7 SUPPL. 1 , pp. 177-180
    • Diamond, S.L.1
  • 4
    • 0028064839 scopus 로고
    • A model for the tissue factor pathway to thrombin. I. an empirical study.
    • Lawson JH, Kalafatis M, Stram S, Mann KG. A model for the tissue factor pathway to thrombin. I. an empirical study. J Biol Chem 1994, 269:23357-23366.
    • (1994) J Biol Chem , vol.269 , pp. 23357-23366
    • Lawson, J.H.1    Kalafatis, M.2    Stram, S.3    Mann, K.G.4
  • 5
    • 0027936105 scopus 로고
    • A model for the tissue factor pathway to thrombin. II. A mathematical simulation.
    • Jones KC, Mann KG. A model for the tissue factor pathway to thrombin. II. A mathematical simulation. J Biol Chem 1994, 269:23367-23373.
    • (1994) J Biol Chem , vol.269 , pp. 23367-23373
    • Jones, K.C.1    Mann, K.G.2
  • 6
    • 0037166290 scopus 로고    scopus 로고
    • A model for the stoichiometric regulation of blood coagulation.
    • Hockin M, Jones K, Mann KG. A model for the stoichiometric regulation of blood coagulation. J Biol Chem 2002, 277:18322-18333.
    • (2002) J Biol Chem , vol.277 , pp. 18322-18333
    • Hockin, M.1    Jones, K.2    Mann, K.G.3
  • 8
    • 0035119193 scopus 로고    scopus 로고
    • Surface-mediated control of blood coagulation: the role of binding site densities and platelet deposition.
    • Kuharsky AL, Fogelson AL. Surface-mediated control of blood coagulation: the role of binding site densities and platelet deposition. Biophys J 2001, 80:1050-1074.
    • (2001) Biophys J , vol.80 , pp. 1050-1074
    • Kuharsky, A.L.1    Fogelson, A.L.2
  • 9
    • 1342312137 scopus 로고    scopus 로고
    • A mathematical model of lipid-mediated thrombin generation.
    • Bungay SD, Gentry PA, Gentry RD. A mathematical model of lipid-mediated thrombin generation. Math Med Biol 2003, 20:105-129.
    • (2003) Math Med Biol , vol.20 , pp. 105-129
    • Bungay, S.D.1    Gentry, P.A.2    Gentry, R.D.3
  • 10
    • 58149156729 scopus 로고    scopus 로고
    • A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation.
    • Purvis JE, Chatterjee MS, Brass LF, Diamond SL. A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation. Blood 2008, 112:4069-4079.
    • (2008) Blood , vol.112 , pp. 4069-4079
    • Purvis, J.E.1    Chatterjee, M.S.2    Brass, L.F.3    Diamond, S.L.4
  • 11
    • 51649126018 scopus 로고    scopus 로고
    • Platelet adhesive dynamics. part I: Characterization of platelet hydrodynamic collisions and wall effects.
    • Mody NA, King MR. Platelet adhesive dynamics. part I: Characterization of platelet hydrodynamic collisions and wall effects. Biophys J 2008, 95:2539-2555.
    • (2008) Biophys J , vol.95 , pp. 2539-2555
    • Mody, N.A.1    King, M.R.2
  • 12
    • 51649087473 scopus 로고    scopus 로고
    • Platelet adhesive dynamics. part II: High shear-induced transient aggregation via GPIba-vWF-GPIba bridging.
    • Mody NA, King MR. Platelet adhesive dynamics. part II: High shear-induced transient aggregation via GPIba-vWF-GPIba bridging. Biophys J 2008, 95:2556-2574.
    • (2008) Biophys J , vol.95 , pp. 2556-2574
    • Mody, N.A.1    King, M.R.2
  • 13
    • 30044444632 scopus 로고    scopus 로고
    • Three-dimensional simulations of a platelet-shaped spheroid near a wall in shear flow.
    • Mody NA, King MR. Three-dimensional simulations of a platelet-shaped spheroid near a wall in shear flow. Phys Fluids 2005, 17:113302.
    • (2005) Phys Fluids , vol.17 , pp. 113302
    • Mody, N.A.1    King, M.R.2
  • 14
    • 21244434752 scopus 로고    scopus 로고
    • Mechanics of transient platelet adhesion to von Willebrand factor under flow.
    • Mody NA, Lomakin O, Doggett TA, Diacovo TG, King MR. Mechanics of transient platelet adhesion to von Willebrand factor under flow. Biophys J 2005, 88:1432-1443.
    • (2005) Biophys J , vol.88 , pp. 1432-1443
    • Mody, N.A.1    Lomakin, O.2    Doggett, T.A.3    Diacovo, T.G.4    King, M.R.5
  • 16
    • 4444260266 scopus 로고    scopus 로고
    • Platelet adhesion signalling and the regulation of thrombus formation.
    • Gibbins JM. Platelet adhesion signalling and the regulation of thrombus formation. J Cell Sci 2004, 117: 3415-3425.
    • (2004) J Cell Sci , vol.117 , pp. 3415-3425
    • Gibbins, J.M.1
  • 17
    • 0026690271 scopus 로고
    • Simulation of cell rolling and adhesion on surfaces in shear flow: general results and analysis of selectin-mediated neutrophil adhesion.
    • Hammer DA, Apte SM. Simulation of cell rolling and adhesion on surfaces in shear flow: general results and analysis of selectin-mediated neutrophil adhesion. Biophys J 1992, 63:35-57.
    • (1992) Biophys J , vol.63 , pp. 35-57
    • Hammer, D.A.1    Apte, S.M.2
  • 18
    • 0034905478 scopus 로고    scopus 로고
    • Multiparticle adhesive dynamics interactions between stably rolling cells.
    • King MR, Hammer DA. Multiparticle adhesive dynamics interactions between stably rolling cells. Biophys J 2001, 81:799-813.
    • (2001) Biophys J , vol.81 , pp. 799-813
    • King, M.R.1    Hammer, D.A.2
  • 19
    • 39749170960 scopus 로고    scopus 로고
    • Modeling multicellular structures using the subcellular element model. In Single-Cell-Based Models in Biology and Medicine
    • doi:10.1007/978-3-7643-8123-3-10.
    • Newman T. Modeling multicellular structures using the subcellular element model. In Single-Cell-Based Models in Biology and Medicine. Mathematics and Biosciences in Interaction 2007, III, 221-239. doi:10.1007/978-3-7643-8123-3-10.
    • (2007) Mathematics and Biosciences in Interaction , vol.3 , pp. 221-239
    • Newman, T.1
  • 20
    • 36048954140 scopus 로고    scopus 로고
    • Grid-free models of multicellular systems, with an application to large-scale vortices accompanying primitive streak formation.
    • Newman T. Grid-free models of multicellular systems, with an application to large-scale vortices accompanying primitive streak formation. Curr Top Dev Biol 2008, 81:157-182.
    • (2008) Curr Top Dev Biol , vol.81 , pp. 157-182
    • Newman, T.1
  • 21
    • 82655169435 scopus 로고    scopus 로고
    • Modelling platelet-blood flow interaction using the subcellular element Langevin method.
    • Sweet CR, Chatterjee S, Xu Z, Bisordi K, Rosen ED, Alber M. Modelling platelet-blood flow interaction using the subcellular element Langevin method. J R Soc Interface 2011, 8:1760-1771.
    • (2011) J R Soc Interface , vol.8 , pp. 1760-1771
    • Sweet, C.R.1    Chatterjee, S.2    Xu, Z.3    Bisordi, K.4    Rosen, E.D.5    Alber, M.6
  • 22
    • 17844411207 scopus 로고    scopus 로고
    • Spectrin-level modeling of the cytoskeleton and optical tweezers stretching of the erythrocyte.
    • Li J, Dao M, Lim CT, Suresh S. Spectrin-level modeling of the cytoskeleton and optical tweezers stretching of the erythrocyte. Biophys J 2005, 88:3707.
    • (2005) Biophys J , vol.88 , pp. 3707
    • Li, J.1    Dao, M.2    Lim, C.T.3    Suresh, S.4
  • 23
    • 77952786405 scopus 로고    scopus 로고
    • A multiscale red blood cell model with accurate mechanics, rheology, and dynamics.
    • Fedosov D, Caswell B, Karniadakis GE. A multiscale red blood cell model with accurate mechanics, rheology, and dynamics. Biophys J 2010, 98:2215.
    • (2010) Biophys J , vol.98 , pp. 2215
    • Fedosov, D.1    Caswell, B.2    Karniadakis, G.E.3
  • 24
    • 52149120726 scopus 로고    scopus 로고
    • Accurate coarse-grained modeling of red blood cells.
    • Pivkin IV, Karniadakis GE. Accurate coarse-grained modeling of red blood cells. Phys Rev Lett 2008, 101:118105.
    • (2008) Phys Rev Lett , vol.101 , pp. 118105
    • Pivkin, I.V.1    Karniadakis, G.E.2
  • 25
    • 0031708414 scopus 로고    scopus 로고
    • Simulations of the erythrocyte cytoskeleton at large deformation. I. Microscopic models.
    • Boey SK, Boal DH, Discher DE. Simulations of the erythrocyte cytoskeleton at large deformation. I. Microscopic models. Biophys J 1998, 75:1573.
    • (1998) Biophys J , vol.75 , pp. 1573
    • Boey, S.K.1    Boal, D.H.2    Discher, D.E.3
  • 26
    • 68449088259 scopus 로고    scopus 로고
    • Multiscale mechanics of fibrin polymer: Gel stretching with protein unfolding and loss of water.
    • Brown AE, Litvinov RI, Discher DE, Purohit PK, Weisel JW. Multiscale mechanics of fibrin polymer: Gel stretching with protein unfolding and loss of water. Science 2009, 325:741-744.
    • (2009) Science , vol.325 , pp. 741-744
    • Brown, A.E.1    Litvinov, R.I.2    Discher, D.E.3    Purohit, P.K.4    Weisel, J.W.5
  • 27
    • 65249122033 scopus 로고    scopus 로고
    • Nonlinear elasticity of stiff filament networks: strain stiffening, negative normal stress, and filament alignment in fibrin gels.
    • Kang H, Wen Q, Janmey PA, Tang JX, Conti E, MacKintosh FC. Nonlinear elasticity of stiff filament networks: strain stiffening, negative normal stress, and filament alignment in fibrin gels. J Phys Chem, B 2009, 113:3799.
    • (2009) J Phys Chem, B , vol.113 , pp. 3799
    • Kang, H.1    Wen, Q.2    Janmey, P.A.3    Tang, J.X.4    Conti, E.5    MacKintosh, F.C.6
  • 29
    • 33748545578 scopus 로고    scopus 로고
    • Floppy modes and nonaffine deformations in random fiber networks.
    • Heussinger C, Frey E. Floppy modes and nonaffine deformations in random fiber networks. Phys Rev Lett 2006, 97:105501.
    • (2006) Phys Rev Lett , vol.97 , pp. 105501
    • Heussinger, C.1    Frey, E.2
  • 30
    • 28844448771 scopus 로고    scopus 로고
    • Alternative explanation of stiffening in cross-linked semiflexible networks.
    • Onck PR, Koeman T, Van Dillen T, Van der Giessen E. Alternative explanation of stiffening in cross-linked semiflexible networks. Phys Rev Lett 2005, 95:178102.
    • (2005) Phys Rev Lett , vol.95 , pp. 178102
    • Onck, P.R.1    Koeman, T.2    Van Dillen, T.3    Van der Giessen, E.4
  • 34
    • 0033302248 scopus 로고    scopus 로고
    • Engineering design of optimal strategies for blood clot dissolution.
    • Diamond SL. Engineering design of optimal strategies for blood clot dissolution. Ann Rev Biomed Eng 1999, 1:427.
    • (1999) Ann Rev Biomed Eng , vol.1 , pp. 427
    • Diamond, S.L.1
  • 38
    • 84872798286 scopus 로고
    • Röntgenuntersuchung gelöster fadenmoleküle.
    • Kratky O, Porod G. Röntgenuntersuchung gelöster fadenmoleküle. Red Trau Chim 1949, 6:403-407.
    • (1949) Red Trau Chim , vol.6 , pp. 403-407
    • Kratky, O.1    Porod, G.2
  • 39
    • 0037083201 scopus 로고    scopus 로고
    • An experimental and theoretical study on the dissolution of mural fibrin clots by tissue-type plasminogen activator.
    • Wootton DM, Popel AS, Alevriadou BR. An experimental and theoretical study on the dissolution of mural fibrin clots by tissue-type plasminogen activator. Biotechnol Bioeng 2002, 77:405-419.
    • (2002) Biotechnol Bioeng , vol.77 , pp. 405-419
    • Wootton, D.M.1    Popel, A.S.2    Alevriadou, B.R.3
  • 40
    • 0027141112 scopus 로고
    • Inner clot diffusion and permeation during fibrinolysis.
    • Diamond SL, Anand S. Inner clot diffusion and permeation during fibrinolysis. Biophys J 1993, 65:2622-2643.
    • (1993) Biophys J , vol.65 , pp. 2622-2643
    • Diamond, S.L.1    Anand, S.2
  • 41
    • 0029056293 scopus 로고
    • Enzyme-mediated proteolysis of fibrous biopolymers: Dissolution front movement in fibrin or collagen under conditions of diffusive or convective transport.
    • Anand S, Wu JH, Diamond SL. Enzyme-mediated proteolysis of fibrous biopolymers: Dissolution front movement in fibrin or collagen under conditions of diffusive or convective transport. Biotechnol Bioeng 1995, 48:89-107.
    • (1995) Biotechnol Bioeng , vol.48 , pp. 89-107
    • Anand, S.1    Wu, J.H.2    Diamond, S.L.3
  • 42
    • 41949099291 scopus 로고    scopus 로고
    • Immersed-boundary-type models of intravascular platelet aggregation.
    • Fogelson AL, Guy RD. Immersed-boundary-type models of intravascular platelet aggregation. Comput Method Appl Mech Eng 2008, 197:2087-2104.39.
    • (2008) Comput Method Appl Mech Eng , vol.197 , pp. 2087-210439
    • Fogelson, A.L.1    Guy, R.D.2
  • 43
    • 0001021844 scopus 로고
    • A mathematical model and numerical method for studying platelet adhesion and aggregation during blood clotting.
    • Fogelson AL. A mathematical model and numerical method for studying platelet adhesion and aggregation during blood clotting. J Comput Phys 1984, 56:111-134.
    • (1984) J Comput Phys , vol.56 , pp. 111-134
    • Fogelson, A.L.1
  • 44
    • 0026908030 scopus 로고
    • Continuum models of platelet aggregation: formulation and mechanical properties.
    • Fogelson AL. Continuum models of platelet aggregation: formulation and mechanical properties. SIAM JAM 1992, 52:1089-1110.
    • (1992) SIAM JAM , vol.52 , pp. 1089-1110
    • Fogelson, A.L.1
  • 45
    • 0000868581 scopus 로고    scopus 로고
    • An immersed boundary method with formal second order accuracy and reduced numerical viscosity.
    • Lai MC, Peskin CS. An immersed boundary method with formal second order accuracy and reduced numerical viscosity. J Comp Phys 2000, 160:705-719.
    • (2000) J Comp Phys , vol.160 , pp. 705-719
    • Lai, M.C.1    Peskin, C.S.2
  • 46
    • 33751544551 scopus 로고    scopus 로고
    • The immersed boundary method.
    • Peskin CS. The immersed boundary method. Acta Numerica 2002, 11:479-517.
    • (2002) Acta Numerica , vol.11 , pp. 479-517
    • Peskin, C.S.1
  • 47
    • 85015561162 scopus 로고    scopus 로고
    • Immersed boundary model of aortic heart valve dynamics with physiological driving and loading conditions.
    • Griffith BE. Immersed boundary model of aortic heart valve dynamics with physiological driving and loading conditions. Int J Numer Meth Biomed Eng 2011.
    • (2011) Int J Numer Meth Biomed Eng
    • Griffith, B.E.1
  • 48
    • 0036646919 scopus 로고    scopus 로고
    • Simulation of a flexible flapping filament in a flowing soap film by the immersed boundary method.
    • Zhu L, Peskin C. Simulation of a flexible flapping filament in a flowing soap film by the immersed boundary method. J Comput Phys 2002, 179:452-468.
    • (2002) J Comput Phys , vol.179 , pp. 452-468
    • Zhu, L.1    Peskin, C.2
  • 49
    • 0017424014 scopus 로고
    • Numerical analysis of blood flow in the heart.
    • Peskin CS. Numerical analysis of blood flow in the heart. J Comp Phys 1977, 25:220-252.
    • (1977) J Comp Phys , vol.25 , pp. 220-252
    • Peskin, C.S.1
  • 50
    • 33751224781 scopus 로고    scopus 로고
    • Blood flow velocity effects and role of activation delay time on growth and form of platelet thrombi.
    • Pivkin IV, Richardson PD, Karniadakis G. Blood flow velocity effects and role of activation delay time on growth and form of platelet thrombi. Proc Natl Acad Sci USA 2006, 103:17164-17169.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 17164-17169
    • Pivkin, I.V.1    Richardson, P.D.2    Karniadakis, G.3
  • 51
    • 0035452544 scopus 로고    scopus 로고
    • Localized force representations for particles sedimenting in stokes flow.
    • Maxey MR, Patel BK. Localized force representations for particles sedimenting in stokes flow. Int J Multiphase Flow 2001, 27:1603.
    • (2001) Int J Multiphase Flow , vol.27 , pp. 1603
    • Maxey, M.R.1    Patel, B.K.2
  • 52
    • 0014966998 scopus 로고
    • Growth rate in vivo of platelet thrombi, produced by iontophoresis of ADP, as a function of mean blood flow velocity.
    • Begent N, Born GV. Growth rate in vivo of platelet thrombi, produced by iontophoresis of ADP, as a function of mean blood flow velocity. Nature 1970, 227:926-930.
    • (1970) Nature , vol.227 , pp. 926-930
    • Begent, N.1    Born, G.V.2
  • 53
    • 77952268101 scopus 로고    scopus 로고
    • A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade.
    • Xu Z, Lioi J, Mu J, Liu X, Kamocka MM, Rosen ED, Chen DZ, Alber MS. A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade. Biophys J 2010, 98:1723-1732.
    • (2010) Biophys J , vol.98 , pp. 1723-1732
    • Xu, Z.1    Lioi, J.2    Mu, J.3    Liu, X.4    Kamocka, M.M.5    Rosen, E.D.6    Chen, D.Z.7    Alber, M.S.8
  • 57
    • 34248201490 scopus 로고    scopus 로고
    • Parallel implementation a of the cellular potts model for simulation of morphogenesis.
    • Chen N, Glazier JA, Izaguirre JA, Alber MS. Parallel implementation a of the cellular potts model for simulation of morphogenesis. Comput Phys Commun 2007, 76:670-681.
    • (2007) Comput Phys Commun , vol.76 , pp. 670-681
    • Chen, N.1    Glazier, J.A.2    Izaguirre, J.A.3    Alber, M.S.4
  • 59
    • 0000135489 scopus 로고
    • Simulation of biological cell sorting using a two-dimensional extended potts model.
    • Graner FMC, Glazier JA. Simulation of biological cell sorting using a two-dimensional extended potts model. Phys Rev Lett 1992, 69:2013-2016.
    • (1992) Phys Rev Lett , vol.69 , pp. 2013-2016
    • Graner, F.M.C.1    Glazier, J.A.2
  • 62
    • 34247105815 scopus 로고    scopus 로고
    • Fibrinogen and fibrin: scaffold proteins in hemostasis.
    • Lord ST. Fibrinogen and fibrin: scaffold proteins in hemostasis. Curr Opin Hematol 2007, 14:236-241.
    • (2007) Curr Opin Hematol , vol.14 , pp. 236-241
    • Lord, S.T.1
  • 63
    • 57349147751 scopus 로고    scopus 로고
    • Fibrin gels and their clinical and bioengineering applications.
    • Janmey PA, Winer JP, Weisel JW. Fibrin gels and their clinical and bioengineering applications. J R Soc Interface 2009, 6:1-10.
    • (2009) J R Soc Interface , vol.6 , pp. 1-10
    • Janmey, P.A.1    Winer, J.P.2    Weisel, J.W.3
  • 65
    • 17044393884 scopus 로고    scopus 로고
    • Coarse-grained models for proteins.
    • Tozzini V. Coarse-grained models for proteins. Curr Opin Struct Biol 2005, 15:144-150.
    • (2005) Curr Opin Struct Biol , vol.15 , pp. 144-150
    • Tozzini, V.1
  • 66
    • 77649207414 scopus 로고    scopus 로고
    • Identifying the rules of engagement enabling leukocyte rolling, activation, and adhesion.
    • 6:e1000681.
    • Tang J, Hunt CA. Identifying the rules of engagement enabling leukocyte rolling, activation, and adhesion. PLoS Comput Biol 2010, 6:e1000681.
    • (2010) PLoS Comput Biol
    • Tang, J.1    Hunt, C.A.2
  • 67
    • 78649270513 scopus 로고    scopus 로고
    • Diffusion anisotropy in collagen gels and tumors: the effect of fiber network orientation.
    • Stylianopoulos T, Diop-Frimpong B, Munn LL, Jain RK. Diffusion anisotropy in collagen gels and tumors: the effect of fiber network orientation. Biophys J 2010, 99:3119-3128.
    • (2010) Biophys J , vol.99 , pp. 3119-3128
    • Stylianopoulos, T.1    Diop-Frimpong, B.2    Munn, L.L.3    Jain, R.K.4
  • 68
    • 79951549527 scopus 로고    scopus 로고
    • Initial fiber alignment pattern alters extracellular matrix synthesis in fibroblast-populated fibrin gel cruciforms and correlates with predicted tension.
    • Sander EA, Barocas VH, Tranquillo RT. Initial fiber alignment pattern alters extracellular matrix synthesis in fibroblast-populated fibrin gel cruciforms and correlates with predicted tension. Ann Biomed Eng 2011, 39:714-729.
    • (2011) Ann Biomed Eng , vol.39 , pp. 714-729
    • Sander, E.A.1    Barocas, V.H.2    Tranquillo, R.T.3
  • 69
    • 67649502891 scopus 로고    scopus 로고
    • A closed-form structural model of planar fibrous tissue mechanics.
    • Raghupathy R, Barocas VH. A closed-form structural model of planar fibrous tissue mechanics. J Biomech 2009, 42:1424-1428.
    • (2009) J Biomech , vol.42 , pp. 1424-1428
    • Raghupathy, R.1    Barocas, V.H.2


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