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Volumn 1, Issue , 2011, Pages

Microbiomes of ant castes implicate new microbial roles in the fungus-growing ant Trachymyrmex septentrionalis

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84859742714     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep00204     Document Type: Article
Times cited : (67)

References (62)
  • 1
    • 0031003122 scopus 로고    scopus 로고
    • Yeasts associated with nests of the leaf-cutting ant Atta sexdens rubropilosa forel 1908
    • Carreiro, S. C. et al. Yeasts associated with nests of the leaf-cutting ant Atta sexdens rubropilosa Forel, 1908. Anton. Leeuw. 71, 243-248 (1997).
    • (1997) Anton. Leeuw. , vol.71 , pp. 243-248
    • Carreiro, S.C.1
  • 2
    • 5144228356 scopus 로고    scopus 로고
    • Ocurrence of the antibiotic producing bacterium Burkholderia sp. in colonies of the leaf-cutting ant Atta sexdens rubropilosa
    • DOI 10.1016/j.femsle.2004.09.005, PII S037810970400655X
    • Santos, A. V., Dillon, R. J., Dillon, V. M., Reynolds, S. E. & Samuels, R. I. Occurrence of the antibiotic producing bacterium Burkholderia sp. in colonies of the leaf-cutting ant Atta sexdens rubropilosa. FEMS Microbiol. Lett. 239, 319-323 (2004). (Pubitemid 39346141)
    • (2004) FEMS Microbiology Letters , vol.239 , Issue.2 , pp. 319-323
    • Santos, A.V.1    Dillon, R.J.2    Dillon, V.M.3    Reynolds, S.E.4    Samuels, R.I.5
  • 4
    • 69249232276 scopus 로고    scopus 로고
    • Antagonistic interactions between garden yeasts and microfungal garden pathogens of leaf-cutting ants
    • Rodrigues, A., Cable, R. N., Mueller, U. G., Bacci, M. & Pagnocca, F. C. Antagonistic interactions between garden yeasts and microfungal garden pathogens of leaf-cutting ants. Anton. Leeuw. 96, 331-342 (2009).
    • (2009) Anton. Leeuw , vol.96 , pp. 331-342
    • Rodrigues, A.1    Cable, R.N.2    Mueller, U.G.3    Bacci, M.4    Pagnocca, F.C.5
  • 5
    • 70449555142 scopus 로고    scopus 로고
    • Generalized antifungal activity and 454-screening of Pseudonocardia and Amycolatopsis bacteria in nests of fungus-growing ants
    • Sen, R. et al. Generalized antifungal activity and 454-screening of Pseudonocardia and Amycolatopsis bacteria in nests of fungus-growing ants. Proc. Natl. Acad. Sci. USA 106, 17805-17810 (2009).
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 17805-17810
    • Sen, R.1
  • 6
    • 78049420498 scopus 로고    scopus 로고
    • An insect herbivore microbiome with high plant biomass-degrading capacity
    • Suen, G. et al. An insect herbivore microbiome with high plant biomass-degrading capacity. PLoS Genet. 6, e1001129 (2010).
    • (2010) PLoS Genet , vol.6
    • Suen, G.1
  • 8
    • 0038522839 scopus 로고    scopus 로고
    • Experimental evidence of a tripartite mutualism: Bacteria protect ant fungus gardens from specialized parasites
    • DOI 10.1034/j.1600-0706.2003.12036.x
    • Currie, C. R., Bot, A. N. M. & Boomsma, J. J. Experimental evidence of a tripartite mutualism: bacteria protect ant fungus gardens from specialized parasites. Oikos 101, 91-102 (2003). (Pubitemid 36614722)
    • (2003) Oikos , vol.101 , Issue.1 , pp. 91-102
    • Currie, C.R.1    Bot, A.N.M.2    Boomsma, J.J.3
  • 9
    • 54849418905 scopus 로고    scopus 로고
    • Coevolution between attine ants and actinomycete bacteria: A reevaluation
    • Mueller, U. G., Dash, D., Rabeling, C. & Rodrigues, A. Coevolution between attine ants and actinomycete bacteria: a reevaluation. Evolution 62, 2894-2912 (2008).
    • (2008) Evolution , vol.62 , pp. 2894-2912
    • Mueller, U.G.1    Dash, D.2    Rabeling, C.3    Rodrigues, A.4
  • 10
    • 41549128485 scopus 로고    scopus 로고
    • Antagonistic bacterial interactions help shape host-symbiont dynamics within the fungusgrowing ant-microbe mutualism
    • Poulsen, M., Erhardt, D. P., Molinaro, D. J., Lin, T.-L. & Currie, C. R. Antagonistic bacterial interactions help shape host-symbiont dynamics within the fungusgrowing ant-microbe mutualism. PLoS ONE 2, e960 (2007).
    • (2007) PLoS ONE , vol.2
    • Poulsen, M.1    Erhardt, D.P.2    Molinaro, D.J.3    Lin, T.-L.4    Currie, C.R.5
  • 11
    • 63849278056 scopus 로고    scopus 로고
    • Candicidin-producing Streptomyces support leaf-cutting ants to protect their fungus garden against the pathogenic fungus escovopsis
    • Haeder, S., Wirth, R., Herz, H. & Spiteller, D. Candicidin-producing Streptomyces support leaf-cutting ants to protect their fungus garden against the pathogenic fungus Escovopsis. Proc. Natl. Acad. Sci. USA 106, 4742-4746 (2009).
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 4742-4746
    • Haeder, S.1    Wirth, R.2    Herz, H.3    Spiteller, D.4
  • 12
    • 27844518266 scopus 로고    scopus 로고
    • Phylogenetic analysis of mutualistic filamentous bacteria associated with fungus-growing ants
    • DOI 10.1139/w05-023
    • Cafaro, M. J. & Currie, C. R. Phylogenetic analysis of mutualistic filamentous bacteria associated with fungus-growing ants. Can. J. Microbiol. 51, 441-446 (2005). (Pubitemid 41641227)
    • (2005) Canadian Journal of Microbiology , vol.51 , Issue.6 , pp. 441-446
    • Cafaro, M.J.1    Currie, C.R.2
  • 13
    • 30344438239 scopus 로고    scopus 로고
    • Coevolved crypts and exocrine glands support mutualistic bacteria in fungus-growing ants
    • DOI 10.1126/science.1119744
    • Currie, C. R. Coevolved crypts and exocrine glands support mutualistic bacteria in fungus-growing ants. Science 311, 81-83 (2006). (Pubitemid 43063062)
    • (2006) Science , vol.311 , Issue.5757 , pp. 81-83
    • Currie, C.R.1    Poulsen, M.2    Mendenhall, J.3    Boomsma, J.J.4    Billen, J.5
  • 14
    • 77956996758 scopus 로고    scopus 로고
    • A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus
    • Barke, J. et al. A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus. BMC Biol. 8, 109 (2010).
    • (2010) BMC Biol , vol.8 , pp. 109
    • Barke, J.1
  • 15
    • 79955758518 scopus 로고    scopus 로고
    • Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria
    • doi:10. 1098/rspb. 2010. 2118
    • Cafaro, M. J. et al. Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria. Proc. Roy. Sci. B-Biol. Sci. (2011).doi:10. 1098/rspb. 2010. 2118
    • (2011) Proc. Roy. Sci. B-Biol. Sci.
    • Cafaro, M.J.1
  • 16
    • 79952128810 scopus 로고    scopus 로고
    • Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants
    • Schoenian, I. et al. Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants. Proc. Natl. Acad. Sci. USA 108, 1955-1960 (2011).
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 1955-1960
    • Schoenian, I.1
  • 17
    • 70350246089 scopus 로고    scopus 로고
    • Identification of functionally clustered nystatin-like biosynthetic genes in a rare actinomycetes, Pseudonocardia autotrophica
    • Kim, B.-G. et al. Identification of functionally clustered nystatin-like biosynthetic genes in a rare actinomycetes, Pseudonocardia autotrophica. J. Ind. Microbiol. Biotechnol. 36, 1425-1434 (2009).
    • (2009) J. Ind. Microbiol. Biotechnol , vol.36 , pp. 1425-1434
    • Kim, B.-G.1
  • 18
    • 79961047167 scopus 로고    scopus 로고
    • A mutualistic microbiome: How do fungus-growing ants select their antibiotic-producing bacteria?
    • Barke, J., Seipke, R. F., Yu, D. W. & Hutchings, M. I. A mutualistic microbiome: How do fungus-growing ants select their antibiotic-producing bacteria? Commun. Integr. Biol. 4, 1-3 (2010).
    • (2010) Commun. Integr. Biol , vol.4 , pp. 1-3
    • Barke, J.1    Seipke, R.F.2    Yu, D.W.3    Hutchings, M.I.4
  • 19
    • 0033594414 scopus 로고    scopus 로고
    • Fungus-growing ants use antibiotic-producing bacteria to control garden parasites
    • DOI 10.1038/19519
    • Currie, C. R., Scott, J. A., Summerbell, R. C. & Malloch, D. Fungus-growing ants use antibiotic-producing bacteria to control garden parasites. Nature 398, 701-704 (1999). (Pubitemid 29197647)
    • (1999) Nature , vol.398 , Issue.6729 , pp. 701-704
    • Currie, C.R.1    Scottt, J.A.2    Summerbell, R.C.3    Malloch, D.4
  • 21
    • 53749104933 scopus 로고    scopus 로고
    • Phylogeography of post-Pleistocene population expansion in a fungus-gardening ant and its microbial mutualists
    • Mikheyev, A. S., Vo, T. & Mueller, U. G. Phylogeography of post-Pleistocene population expansion in a fungus-gardening ant and its microbial mutualists. Mol. Ecol. 17, 4480-4488 (2008).
    • (2008) Mol. Ecol , vol.17 , pp. 4480-4488
    • Mikheyev, A.S.1    Vo, T.2    Mueller, U.G.3
  • 22
    • 77955553995 scopus 로고    scopus 로고
    • Placement of attine ant-associated Pseudonocardia in a global Pseudonocardia phylogeny (Pseudonocardiaceae, Actinomycetales): A test of two symbiont-association models
    • Mueller, U. G., Ishak, H. D., Lee, J. C., Sen, R. & Gutell, R. R. Placement of attine ant-associated Pseudonocardia in a global Pseudonocardia phylogeny (Pseudonocardiaceae, Actinomycetales): a test of two symbiont-association models. Anton. Leeuw. 98, 195-212 (2010).
    • (2010) Anton. Leeuw , vol.98 , pp. 195-212
    • Mueller, U.G.1    Ishak, H.D.2    Lee, J.C.3    Sen, R.4    Gutell, R.R.5
  • 23
    • 80054109168 scopus 로고    scopus 로고
    • Ecology of microfungal communities in gardens of fungus-growing ants (Hymenoptera: Formicidae): A year-long survey of three species of attine ants in central texas
    • Rodrigues, A., Mueller, U. G., Ishak, H. D., Bacci, M. J. & Pagnocca, F. C. Ecology of microfungal communities in gardens of fungus-growing ants (Hymenoptera: Formicidae): A year-long survey of three species of attine ants in Central Texas. FEMS Microbiol. Ecol. 78, 244-255 (2011).
    • (2011) FEMS Microbiol. Ecol , vol.78 , pp. 244-255
    • Rodrigues, A.1    Mueller, U.G.2    Ishak, H.D.3    Bacci, M.J.4    Pagnocca, F.C.5
  • 24
    • 33750858838 scopus 로고    scopus 로고
    • Colony productivity of the fungus-gardening ant Trachymyrmex septentrionalis (Hymenoptera: Formicidae) in a Florida pine forest
    • DOI 10.1603/0013-8746(2006)99[673:CPOTFA]2.0.CO;2
    • Seal, J. N. & Tschinkel, W. R. Colony productivity of the fungus-gardening ant Trachymyrmex septentrionalis (Hymenoptera: Formicidae) in a Florida pine forest. Ann. Entomol. Soc. Am. 99, 673-682 (2006). (Pubitemid 44717645)
    • (2006) Annals of the Entomological Society of America , vol.99 , Issue.4 , pp. 673-682
    • Seal, J.N.1    Tschinkel, W.R.2
  • 25
    • 37549069331 scopus 로고    scopus 로고
    • A review of the North American species of the fungus-gardening ant genus Trachymyrmex (Hymenoptera: Formicidae)
    • Rabeling, C., Cover, S. P., Johnson, R. A. & Mueller, U. G. A review of the North American species of the fungus-gardening ant genus Trachymyrmex (Hymenoptera: Formicidae).Zootaxa 1664, 1-53 (2007).
    • (2007) Zootaxa , vol.1664 , pp. 1-53
    • Rabeling, C.1    Cover, S.P.2    Johnson, R.A.3    Mueller, U.G.4
  • 26
    • 67650021209 scopus 로고    scopus 로고
    • Microbial community profiling for humanmicrobiome projects: Tools, techniques, and challenges
    • Hamady, M. & Knight, R. Microbial community profiling for humanmicrobiome projects: Tools, techniques, and challenges. Genome Res. 19, 1141-1152 (2009).
    • (2009) Genome Res , vol.19 , pp. 1141-1152
    • Hamady, M.1    Knight, R.2
  • 27
    • 34548293679 scopus 로고    scopus 로고
    • Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • DOI 10.1128/AEM.00062-07
    • Wang, Q., Garrity, G. M., Tiedje, J. M. & Cole, J. R. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73, 5261-5267 (2007). (Pubitemid 47326658)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.16 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 28
    • 30344477206 scopus 로고    scopus 로고
    • Specificity of the mutualistic association between actinomycete bacteria and two sympatric species of Acromyrmex leaf-cutting ants
    • Poulsen, M., Cafaro, M., Boomsma, J. J. & Currie, C. R. Specificity of the mutualistic association between actinomycete bacteria and two sympatric species of Acromyrmex leaf-cutting ants. Mol. Ecol. 14, 3597-3604 (2005).
    • (2005) Mol. Ecol , vol.14 , pp. 3597-3604
    • Poulsen, M.1    Cafaro, M.2    Boomsma, J.J.3    Currie, C.R.4
  • 29
    • 70450158763 scopus 로고    scopus 로고
    • Symbiotic nitrogen fixation in the fungus gardens of leafcutter ants
    • Pinto-Tomás, A. A. et al. Symbiotic nitrogen fixation in the fungus gardens of leafcutter ants. Science 326, 1120-1123 (2009).
    • (2009) Science , vol.326 , pp. 1120-1123
    • Pinto-Tomás, A.A.1
  • 30
    • 78549234663 scopus 로고    scopus 로고
    • Isolation and characterization of actinobacteria ectosymbionts from Acromyrmex subterraneus brunneus (Hymenoptera Formicidae)
    • Zucchi, T. D., Guidolin, A. S. & Cônsoli, F. L. Isolation and characterization of actinobacteria ectosymbionts from Acromyrmex subterraneus brunneus (Hymenoptera, Formicidae).Microbiol. Res. 166, 68-76 (2011).
    • (2011) Microbiol. Res , vol.166 , pp. 68-76
    • Zucchi, T.D.1    Guidolin, A.S.2    Cônsoli, F.L.3
  • 31
    • 78650161976 scopus 로고    scopus 로고
    • Quantifying microbial communities with 454 pyrosequencing: Does read abundance count?
    • Amend, A. S., Seifert, K. A. & Bruns, T. D. Quantifying microbial communities with 454 pyrosequencing: does read abundance count? Mol. Eco. 19, 5555-5565 (2010).
    • (2010) Mol. Eco. , vol.19 , pp. 5555-5565
    • Amend, A.S.1    Seifert, K.A.2    Bruns, T.D.3
  • 32
    • 0345079813 scopus 로고
    • Biopolymerdegrading bacteria from nests of the leaf-cutting ant Atta sexdens rubopilosa
    • Bacci, M. J., Ribeiro, S. B., Casarotto, M. E. F. & Pagnocca, F. C. Biopolymerdegrading bacteria from nests of the leaf-cutting ant Atta sexdens rubopilosa. Braz. J. Med. Biol. Res. 28, 79-82 (1995).
    • (1995) Braz. J. Med. Biol. Res , vol.28 , pp. 79-82
    • Bacci, M.J.1    Ribeiro, S.B.2    Casarotto, M.E.F.3    Pagnocca, F.C.4
  • 33
    • 61849148718 scopus 로고    scopus 로고
    • Insect symbioses: A case study of past, present, and future fungus-growing ant research
    • Caldera, E. J., Poulsen, M., Suen, G. & Currie, C. R. Insect symbioses: a case study of past, present, and future fungus-growing ant research. Environ. Entomol 38, 78-92 (2009).
    • (2009) Environ. Entomol , vol.38 , pp. 78-92
    • Caldera, E.J.1    Poulsen, M.2    Suen, G.3    Currie, C.R.4
  • 34
    • 43049142674 scopus 로고    scopus 로고
    • Antimicrobial defense shows an abrupt evolutionary transition in the fungus-growing ants
    • DOI 10.1111/j.1558-5646.2008.00347.x
    • Hughes, W. O. H., Pagliarini, R., Madsen, H. B., Dijkstra, M. B. & Boomsma, J. J. Antimicrobial defense shows an abrupt evolutionary transition in the fungusgrowing ants. Evolution 62, 1252-1257 (2008). (Pubitemid 351623934)
    • (2008) Evolution , vol.62 , Issue.5 , pp. 1252-1257
    • Hughes, W.O.H.1    Pagliarini, R.2    Madsen, H.B.3    Dijkstra, M.B.4    Boomsma, J.J.5
  • 36
    • 67749084346 scopus 로고    scopus 로고
    • Adaptive social immunity in leaf-cutting ants
    • Walker, T. N. & Hughes, W. O. H. Adaptive social immunity in leaf-cutting ants. Biol. Lett 5, 446-448 (2009).
    • (2009) Biol. Lett , vol.5 , pp. 446-448
    • Walker, T.N.1    Hughes, W.O.H.2
  • 37
    • 84871461568 scopus 로고    scopus 로고
    • Symbiotic bacteria on the cuticle of the leaf-cutting ant Acromyrmex subterraneus subterraneus protect workers from attack by entomopathogenic fungi
    • In press
    • Mattoso, T., Moreira, D. & Samuels, R. Symbiotic bacteria on the cuticle of the leaf-cutting ant Acromyrmex subterraneus subterraneus protect workers from attack by entomopathogenic fungi. Biology Letters In press
    • Biology Letters
    • Mattoso, T.1    Moreira, D.2    Samuels, R.3
  • 38
    • 0003561697 scopus 로고
    • The American Philosophical Society: Philadelphia
    • Weber, N. A. Gardening ants the attines. (The American Philosophical Society: Philadelphia, 1972).
    • (1972) Gardening Ants the Attines
    • Weber, N.A.1
  • 39
    • 77954626771 scopus 로고    scopus 로고
    • Saprophagous insect larvae, Drosophila melanogaster, profit from increased species richness in beneficial microbes
    • doi:10. 1111/j. 1439-0418. 2009. 01458. x
    • Rohlfs, M. & Kürschner, L. Saprophagous insect larvae, Drosophila melanogaster, profit from increased species richness in beneficial microbes. J. Appl. Entomol. (2009).doi:10. 1111/j. 1439-0418. 2009. 01458. x
    • (2009) J. Appl. Entomol.
    • Rohlfs, M.1    Kürschner, L.2
  • 40
    • 70449571974 scopus 로고    scopus 로고
    • Rethinking crop-disease management in fungusgrowing ants
    • Boomsma, J. J. & Aanen, D. K. Rethinking crop-disease management in fungusgrowing ants. P. Natl. Acad. Sci. USA 106, 17611-17612 (2009).
    • (2009) P. Natl. Acad. Sci. USA , vol.106 , pp. 17611-17612
    • Boomsma, J.J.1    Aanen, D.K.2
  • 41
    • 68549132517 scopus 로고    scopus 로고
    • Assessment of bias associated with incomplete extraction of microbial DNA from soil
    • Feinstein, L. M., Sul, W. J. & Blackwood, C. B. Assessment of bias associated with incomplete extraction of microbial DNA from soil. Appl. Environ. Microbiol. 75, 5428-5433 (2009).
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 5428-5433
    • Feinstein, L.M.1    Sul, W.J.2    Blackwood, C.B.3
  • 43
    • 79952626683 scopus 로고    scopus 로고
    • New paradigms for the evolution of beneficial infections
    • Sachs, J. L., Essenberg, C. J. & Turcotte, M. M. New paradigms for the evolution of beneficial infections. Trends Ecol. Evol. 26, 202-209 (2011).
    • (2011) Trends Ecol. Evol , vol.26 , pp. 202-209
    • Sachs, J.L.1    Essenberg, C.J.2    Turcotte, M.M.3
  • 45
    • 60549103430 scopus 로고    scopus 로고
    • Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov
    • Reddy, G. S. N. & Garcia-Pichel, F. Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov. Int. J. Syst. Evol. Microbiol. 59, 449 (2009).
    • (2009) Int. J. Syst. Evol. Microbiol , vol.59 , pp. 449
    • Reddy, G.S.N.1    Garcia-Pichel, F.2
  • 47
    • 79957465837 scopus 로고    scopus 로고
    • Bacterial diversity in Solenopsis invicta and Solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing
    • Ishak, H. D. et al. Bacterial diversity in Solenopsis invicta and Solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing. Microb. Ecol. 61, 821-831 (2011).
    • (2011) Microb. Ecol , vol.61 , pp. 821-831
    • Ishak, H.D.1
  • 49
    • 77954590041 scopus 로고    scopus 로고
    • Adaptation via symbiosis: Recent spread of a drosophila defensive symbiont
    • Jaenike, J., Unckless, R., Cockburn, S. N., Boelio, L. M. & Perlman, S. J. Adaptation via symbiosis: recent spread of a drosophila defensive symbiont. Science 329, 212-215 (2010).
    • (2010) Science , vol.329 , pp. 212-215
    • Jaenike, J.1    Unckless, R.2    Cockburn, S.N.3    Boelio, L.M.4    Perlman, S.J.5
  • 52
    • 42049111815 scopus 로고    scopus 로고
    • Survey of bacterial diversity in chronic wounds using Pyrosequencing DGGE and full ribosome shotgun sequencing
    • Dowd, S. E. et al. Survey of bacterial diversity in chronic wounds using Pyrosequencing, DGGE, and full ribosome shotgun sequencing. BMC Microbiol. 8, 43-43 (2008).
    • (2008) BMC Microbiol , vol.8 , pp. 43-43
    • Dowd, S.E.1
  • 53
    • 63249131326 scopus 로고    scopus 로고
    • Evaluation of the bacterial diversity in cecal contents of laying hens fed various molting diets by using bacterial tag-encoded FLX amplicon pyrosequencing
    • Callaway, T. R. et al. Evaluation of the bacterial diversity in cecal contents of laying hens fed various molting diets by using bacterial tag-encoded FLX amplicon pyrosequencing. Poultry Sci. 88, 298-302 (2009).
    • (2009) Poultry Sci , vol.88 , pp. 298-302
    • Callaway, T.R.1
  • 54
    • 77956683209 scopus 로고    scopus 로고
    • Evaluation of the bacterial diversity of pressure ulcers using bTEFAP pyrosequencing
    • Smith, D. M. et al. Evaluation of the bacterial diversity of pressure ulcers using bTEFAP pyrosequencing. BMC Med. Genomics 3, 41 (2010).
    • (2010) BMC Med. Genomics , vol.3 , pp. 41
    • Smith, D.M.1
  • 55
    • 77950202391 scopus 로고    scopus 로고
    • Stressor exposure disrupts commensalmicrobial populations in the intestines and leads to increased colonization by Citrobacter rodentium
    • Bailey, M. T. et al. Stressor exposure disrupts commensalmicrobial populations in the intestines and leads to increased colonization by Citrobacter rodentium. Infect. Immun. 78, 1509-1519 (2010).
    • (2010) Infect. Immun , vol.78 , pp. 1509-1519
    • Bailey, M.T.1
  • 56
    • 85056045969 scopus 로고    scopus 로고
    • Black box chimera check (B2C2): A Windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets
    • Gontcharova, V. et al. Black box chimera check (B2C2): a Windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets. Open Microbiol. J. 4, 47-52 (2010).
    • (2010) Open Microbiol. J , vol.4 , pp. 47-52
    • Gontcharova, V.1
  • 57
    • 58149200948 scopus 로고    scopus 로고
    • The ribosomal database project: Improved alignments and new tools for rRNA analysis
    • Cole, J. R. et al. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37, D141-145 (2009).
    • (2009) Nucleic Acids Res , vol.37
    • Cole, J.R.1
  • 58
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • DOI 10.1093/bioinformatics/btl158
    • Li, W. & Godzik, A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22, 1658-1659 (2006). (Pubitemid 43985301)
    • (2006) Bioinformatics , vol.22 , Issue.13 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 59
    • 77949495216 scopus 로고    scopus 로고
    • A high-throughput DNA sequence aligner for microbial ecology studies
    • Schloss, P. D. A high-throughput DNA sequence aligner for microbial ecology studies. PLoS ONE 4, e8230 (2009).
    • (2009) PLoS ONE , vol.4
    • Schloss, P.D.1
  • 60
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-approximately maximumlikelihood trees for large alignments
    • Price, M. N., Dehal, P. S. & Arkin, A. P. FastTree 2-approximately maximumlikelihood trees for large alignments. PLoS ONE 5, e9490 (2010).
    • (2010) PLoS ONE , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 61
    • 73449128271 scopus 로고    scopus 로고
    • Fast uni frac: Facilitating highthroughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and phylo chip data
    • Hamady, M., Lozupone, C. & Knight, R. Fast UniFrac: facilitating highthroughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. ISME J. 4, 17-27 (2009).
    • (2009) ISME J , vol.4 , pp. 17-27
    • Hamady, M.1    Lozupone, C.2    Knight, R.3


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