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Volumn 28, Issue 2, 2012, Pages 312-318

Proteomic and physiological experiments to test Thermotoga neapolitana constraint-based model hypotheses of carbon source utilization

Author keywords

ATP conservation; Cellotetraose; Constraint based model; Flux balance analysis; Proteomics; Thermotoga neapolitana; Two dimensional protein electrophoresis

Indexed keywords

CELLOTETRAOSE; CONSTRAINT-BASED; FLUX BALANCE ANALYSIS; PROTEIN ELECTROPHORESIS; PROTEOMICS; THERMOTOGANEAPOLITANA;

EID: 84859628265     PISSN: 87567938     EISSN: 15206033     Source Type: Journal    
DOI: 10.1002/btpr.735     Document Type: Article
Times cited : (2)

References (21)
  • 1
    • 79952378588 scopus 로고    scopus 로고
    • Comparative constraint-based model development for thermophilic hydrogen production
    • Munro SA, Zinder SH, Walker LP. Comparative constraint-based model development for thermophilic hydrogen production. Ind Biotechnol. 2011; 7: 63-82.
    • (2011) Ind Biotechnol. , vol.7 , pp. 63-82
    • Munro, S.A.1    Zinder, S.H.2    Walker, L.P.3
  • 3
    • 77956193448 scopus 로고    scopus 로고
    • ProgressiveMauve: multiple genome alignment with gene gain, loss and rearrangement
    • 11141-11117
    • Darling AE, Mau B, Perna NT. ProgressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One. 2010; 5: e11147 11141-11117.
    • (2010) PLoS One. , vol.5
    • Darling, A.E.1    Mau, B.2    Perna, N.T.3
  • 10
    • 69149083787 scopus 로고    scopus 로고
    • The fermentation stoichiometry of Thermotoga neapolitana and influence of temperature, oxygen, and pH on hydrogen production
    • Munro SA, Zinder SH, Walker LP. The fermentation stoichiometry of Thermotoga neapolitana and influence of temperature, oxygen, and pH on hydrogen production. Biotechnol Prog. 2009; 25: 1035-1042.
    • (2009) Biotechnol Prog. , vol.25 , pp. 1035-1042
    • Munro, S.A.1    Zinder, S.H.2    Walker, L.P.3
  • 11
    • 0026484958 scopus 로고
    • Improved methods for cultivation of the extremely thermophilic bacterium Thermotoga neapolitana
    • Childers SE, Vargas M, Noll KM. Improved methods for cultivation of the extremely thermophilic bacterium Thermotoga neapolitana. Appl Environ Microbiol. 1992; 58: 3949-3953.
    • (1992) Appl Environ Microbiol. , vol.58 , pp. 3949-3953
    • Childers, S.E.1    Vargas, M.2    Noll, K.M.3
  • 12
    • 0025190606 scopus 로고
    • Increased uniformity in the response of the Coomassie Blue G-Protein assay to different proteins
    • Stoscheck CM. Increased uniformity in the response of the Coomassie Blue G-Protein assay to different proteins. Anal Biochem. 1990; 184: 111-116.
    • (1990) Anal Biochem. , vol.184 , pp. 111-116
    • Stoscheck, C.M.1
  • 13
    • 0033136940 scopus 로고    scopus 로고
    • Proteomics: theoretical and experimental considerations
    • Hatzimanikatis V, Choe LH, Lee KH. Proteomics: theoretical and experimental considerations. Biotechnol Prog. 1999; 15: 312-318.
    • (1999) Biotechnol Prog. , vol.15 , pp. 312-318
    • Hatzimanikatis, V.1    Choe, L.H.2    Lee, K.H.3
  • 14
    • 0347764580 scopus 로고    scopus 로고
    • Comparison of automated in-gel digest methods for femtomole level samples
    • Finehout EJ, Lee KH. Comparison of automated in-gel digest methods for femtomole level samples. Electrophoresis. 2003; 24: 3508-3516.
    • (2003) Electrophoresis. , vol.24 , pp. 3508-3516
    • Finehout, E.J.1    Lee, K.H.2
  • 15
    • 0033810985 scopus 로고    scopus 로고
    • Cloning and characterization of the glucooligosaccharide catabolic pathway β-glucan glucohydrolase and cellobiose phosphorylase in the marine hyperthermophile Thermotoga neapolitana
    • Yernool DA, McCarthy JK, Eveleigh DE, Bok JD. Cloning and characterization of the glucooligosaccharide catabolic pathway β-glucan glucohydrolase and cellobiose phosphorylase in the marine hyperthermophile Thermotoga neapolitana. J Bacteriol. 2000; 182: 5172-5179.
    • (2000) J Bacteriol. , vol.182 , pp. 5172-5179
    • Yernool, D.A.1    McCarthy, J.K.2    Eveleigh, D.E.3    Bok, J.D.4
  • 16
    • 18844371475 scopus 로고    scopus 로고
    • Cellulose utilization by Clostridium thermocellum: bioenergetics and hydrolysis product assimilation
    • Zhang YHP, Lynd LR. Cellulose utilization by Clostridium thermocellum: bioenergetics and hydrolysis product assimilation. Proc Natl Acad Sci U S A. 2005; 102: 7321-7325.
    • (2005) Proc Natl Acad Sci U S A. , vol.102 , pp. 7321-7325
    • Zhang, Y.H.P.1    Lynd, L.R.2
  • 17
    • 0028785825 scopus 로고
    • Carbohydrate transport by the anaerobic thermophile Clostridium thermocellum LQRI
    • Strobel HJ, Caldwell FC, Dawson KA. Carbohydrate transport by the anaerobic thermophile Clostridium thermocellum LQRI. Appl Environ Microbiol. 1995; 61: 4012-4015.
    • (1995) Appl Environ Microbiol. , vol.61 , pp. 4012-4015
    • Strobel, H.J.1    Caldwell, F.C.2    Dawson, K.A.3
  • 18
    • 33847665648 scopus 로고    scopus 로고
    • Cerebrospinal fluid proteomic biomarkers for Alzheimer's disease
    • Finehout EJ, Franck Z, Choe LH, Relkin N, Lee KH. Cerebrospinal fluid proteomic biomarkers for Alzheimer's disease. Ann Neurol. 2007; 61: 120-129.
    • (2007) Ann Neurol. , vol.61 , pp. 120-129
    • Finehout, E.J.1    Franck, Z.2    Choe, L.H.3    Relkin, N.4    Lee, K.H.5
  • 19
    • 73249145992 scopus 로고    scopus 로고
    • Carbohydrate utilization patterns for the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus reveal broad growth substrate preferences
    • VanFossen AL, Verhaart MRA, Kengen SMW, Kelly RM. Carbohydrate utilization patterns for the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus reveal broad growth substrate preferences. Appl Environ Microbiol. 2009; 75: 7718-7724.
    • (2009) Appl Environ Microbiol. , vol.75 , pp. 7718-7724
    • VanFossen, A.L.1    Verhaart, M.R.A.2    Kengen, S.M.W.3    Kelly, R.M.4
  • 20
    • 0031002263 scopus 로고    scopus 로고
    • Comparative analysis of Embden-Meyerhof and Entner-Doudoroff glycolytic pathways in hyperthermophilic archaea and the bacterium Thermotoga
    • Selig M, Xavier KB, Santos H, Schönheit P. Comparative analysis of Embden-Meyerhof and Entner-Doudoroff glycolytic pathways in hyperthermophilic archaea and the bacterium Thermotoga. Arch Microbiol. 1997; 167: 217-232.
    • (1997) Arch Microbiol. , vol.167 , pp. 217-232
    • Selig, M.1    Xavier, K.B.2    Santos, H.3    Schönheit, P.4
  • 21
    • 77951942319 scopus 로고    scopus 로고
    • Pyrophosphate as a central energy carrier in the hydrogen-producing extremely thermophilic Caldicellulosiruptor saccharolyticus
    • Bielen AA, Willquist K, Engman J, van der Oost J, van Niel EW, Kengen SW. Pyrophosphate as a central energy carrier in the hydrogen-producing extremely thermophilic Caldicellulosiruptor saccharolyticus. FEMS Microbiol Lett. 2010; 307: 48-54.
    • (2010) FEMS Microbiol Lett. , vol.307 , pp. 48-54
    • Bielen, A.A.1    Willquist, K.2    Engman, J.3    van der Oost, J.4    van Niel, E.W.5    Kengen, S.W.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.