메뉴 건너뛰기




Volumn 40, Issue 6, 2012, Pages 2700-2711

The PolyA tail length of yeast histone mRNAs varies during the cell cycle and is influenced by Sen1p and Rrp6p

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; MESSENGER RNA; POLYADENYLATED RNA; RRP6P PROTEIN; SEN1P PROTEIN; UNCLASSIFIED DRUG;

EID: 84859345909     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr1108     Document Type: Article
Times cited : (18)

References (35)
  • 1
    • 54149091257 scopus 로고    scopus 로고
    • Metabolism and regulation of canonical histone mRNAs: Life without a poly(A) tail
    • Marzluff, W.F., Wagner, E.J. and Duronio, R.J. (2008) Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail. Nat. Rev. Genet., 9, 843-854
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 843-854
    • Marzluff, W.F.1    Wagner, E.J.2    Duronio, R.J.3
  • 2
    • 0025863511 scopus 로고
    • The regulation of histone synthesis in the cell cycle
    • Osley, M.A. (1991) The regulation of histone synthesis in the cell cycle. Annu. Rev. Biochem., 60, 827-861
    • (1991) Annu. Rev. Biochem. , vol.60 , pp. 827-861
    • Osley, M.A.1
  • 3
    • 19344366158 scopus 로고    scopus 로고
    • Metazoan replication-dependent histone mRNAs: A distinct set of RNA polymerase II transcripts
    • DOI 10.1016/j.ceb.2005.04.010, PII S0955067405000529, Nucleus and Gene Expression
    • Marzluff, W.F. (2005) Metazoan replication-dependent histone mRNAs: a distinct set of RNA polymerase II transcripts. Curr. Opin. Cell Biol., 17, 274-280 (Pubitemid 40719917)
    • (2005) Current Opinion in Cell Biology , vol.17 , Issue.3 , pp. 274-280
    • Marzluff, W.F.1
  • 4
    • 38049085313 scopus 로고    scopus 로고
    • Early evolution of histone mRNA 30 end processing
    • Davila Lopez, M. and Samuelsson, T. (2008) Early evolution of histone mRNA 30 end processing. RNA, 14, 1-10
    • (2008) RNA , vol.14 , pp. 1-10
    • Davila Lopez, M.1    Samuelsson, T.2
  • 5
    • 0019142258 scopus 로고
    • Yeast histone mRNA is polyadenylated
    • Fahrner, K., Yarger, J. and Hereford, L. (1980) Yeast histone mRNA is polyadenylated. Nucleic Acids Res., 8, 5725-5737 (Pubitemid 11182513)
    • (1980) Nucleic Acids Research , vol.8 , Issue.23 , pp. 5725-5737
    • Fahrner, K.1    Yarger, J.2    Hereford, L.3
  • 6
    • 35548957338 scopus 로고    scopus 로고
    • Deletion of the nuclear exosome component RRP6 leads to continued accumulation of the histone mRNA HTB1 in S-phase of the cell cycle in Saccharomyces cerevisiae
    • DOI 10.1093/nar/gkm691
    • Canavan, R. and Bond, U. (2007) Deletion of the nuclear exosome component RRP6 leads to continued accumulation of the histone mRNA HTB1 in S-phase of the cell cycle in Saccharomyces cerevisiae. Nucleic Acids Res., 35, 6268-6279 (Pubitemid 350018588)
    • (2007) Nucleic Acids Research , vol.35 , Issue.18 , pp. 6268-6279
    • Canavan, R.1    Bond, U.2
  • 7
    • 34249025702 scopus 로고    scopus 로고
    • Contribution of Trf4/5 and the nuclear exosome to genome stability through regulation of histone mRNA levels in Saccharomyces cerevisiae
    • DOI 10.1534/genetics.106.065987
    • Reis, C.C. and Campbell, J.L. (2007) Contribution of Trf4/5 and the nuclear exosome to genome stability through regulation of histone mRNA levels in Saccharomyces cerevisiae. Genetics, 175, 993-1010 (Pubitemid 46798207)
    • (2007) Genetics , vol.175 , Issue.3 , pp. 993-1010
    • Reis, C.C.1    Campbell, J.L.2
  • 8
    • 50849118813 scopus 로고    scopus 로고
    • Exosome-mediated quality control: Substrate recruitment and molecular activity
    • Lebreton, A. and Seraphin, B. (2008) Exosome-mediated quality control: substrate recruitment and molecular activity. Biochim. Biophys. Acta, 1779, 558-565
    • (2008) Biochim. Biophys. Acta , vol.1779 , pp. 558-565
    • Lebreton, A.1    Seraphin, B.2
  • 9
    • 20444368818 scopus 로고    scopus 로고
    • RNA degradation by the exosome is promoted by a nuclear polyadenylation complex
    • DOI 10.1016/j.cell.2005.04.029, PII S0092867405004423
    • LaCava, J., Houseley, J., Saveanu, C., Petfalski, E., Thompson, E., Jacquier, A. and Tollervey, D. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell, 121, 713-724 (Pubitemid 40797594)
    • (2005) Cell , vol.121 , Issue.5 , pp. 713-724
    • LaCava, J.1    Houseley, J.2    Saveanu, C.3    Petfalski, E.4    Thompson, E.5    Jacquier, A.6    Tollervey, D.7
  • 11
    • 73649112807 scopus 로고    scopus 로고
    • The nuclear poly(A)-binding protein interacts with the exosome to promote synthesis of noncoding small nucleolar RNAs
    • Lemay, J.F., D'Amours, A., Lemieux, C., Lackner, D.H., St-Sauveur, V.G., Bahler, J. and Bachand, F. (2010) The nuclear poly(A)-binding protein interacts with the exosome to promote synthesis of noncoding small nucleolar RNAs. Mol. Cell, 37, 34-45
    • (2010) Mol. Cell , vol.37 , pp. 34-45
    • Lemay, J.F.1    D'Amours, A.2    Lemieux, C.3    Lackner, D.H.4    St-Sauveur, V.G.5    Bahler, J.6    Bachand, F.7
  • 12
    • 53949109201 scopus 로고    scopus 로고
    • Polyadenylation linked to transcription termination directs the processing of snoRNA precursors in yeast
    • Grzechnik, P. and Kufel, J. (2008) Polyadenylation linked to transcription termination directs the processing of snoRNA precursors in yeast. Mol. Cell, 32, 247-258
    • (2008) Mol. Cell , vol.32 , pp. 247-258
    • Grzechnik, P.1    Kufel, J.2
  • 13
    • 44349084822 scopus 로고    scopus 로고
    • The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3′ processing pathway
    • DOI 10.1093/nar/gkn160
    • Ciais, D., Bohnsack, M.T. and Tollervey, D. (2008) The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 30 processing pathway. Nucleic Acids Res., 36, 3075-3084 (Pubitemid 351737199)
    • (2008) Nucleic Acids Research , vol.36 , Issue.9 , pp. 3075-3084
    • Ciais, D.1    Bohnsack, M.T.2    Tollervey, D.3
  • 14
    • 66449135943 scopus 로고    scopus 로고
    • Regulation of NAB2 mRNA 30-end formation requires the core exosome and the Trf4p component of the TRAMP complex
    • Roth, K.M., Byam, J., Fang, F. and Butler, J.S. (2009) Regulation of NAB2 mRNA 30-end formation requires the core exosome and the Trf4p component of the TRAMP complex. RNA, 15, 1045-1058
    • (2009) RNA , vol.15 , pp. 1045-1058
    • Roth, K.M.1    Byam, J.2    Fang, F.3    Butler, J.S.4
  • 15
    • 0035921929 scopus 로고    scopus 로고
    • RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts
    • DOI 10.1038/35095090
    • Steinmetz, E.J., Conrad, N.K., Brow, D.A. and Corden, J.L. (2001) RNA-binding protein Nrd1 directs poly(A)-independent 30-end formation of RNA polymerase II transcripts. Nature, 413, 327-331 (Pubitemid 32905855)
    • (2001) Nature , vol.413 , Issue.6853 , pp. 327-331
    • Steinmetz, E.J.1    Conrad, N.K.2    Brow, D.A.3    Corden, J.L.4
  • 16
    • 49449110180 scopus 로고    scopus 로고
    • The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
    • Vasiljeva, L., Kim, M., Mutschler, H., Buratowski, S. and Meinhart, A. (2008) The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain. Nat. Struct. Mol. Biol., 15, 795-804
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 795-804
    • Vasiljeva, L.1    Kim, M.2    Mutschler, H.3    Buratowski, S.4    Meinhart, A.5
  • 17
    • 70349779344 scopus 로고    scopus 로고
    • Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae
    • Rondon, A.G., Mischo, H.E., Kawauchi, J. and Proudfoot, N.J. (2009) Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae. Mol. Cell, 36, 88-98
    • (2009) Mol. Cell , vol.36 , pp. 88-98
    • Rondon, A.G.1    Mischo, H.E.2    Kawauchi, J.3    Proudfoot, N.J.4
  • 18
    • 33751504083 scopus 로고    scopus 로고
    • Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase
    • DOI 10.1016/j.molcel.2006.10.023, PII S1097276506007295
    • Steinmetz, E.J., Warren, C.L., Kuehner, J.N., Panbehi, B., Ansari, A.Z. and Brow, D.A. (2006) Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase. Mol. Cell, 24, 735-746 (Pubitemid 44839212)
    • (2006) Molecular Cell , vol.24 , Issue.5 , pp. 735-746
    • Steinmetz, E.J.1    Warren, C.L.2    Kuehner, J.N.3    Panbehi, B.4    Ansari, A.Z.5    Brow, D.A.6
  • 19
    • 18744380018 scopus 로고    scopus 로고
    • A sequence element downstream of the yeast HTB1 gene contributes to mRNA 3′ processing and cell cycle regulation
    • DOI 10.1128/MCB.22.24.8415-8425.2002
    • Campbell, S.G., Li Del Olmo, M., Beglan, P. and Bond, U. (2002) A sequence element downstream of the yeast HTB1 gene contributes to mRNA 30 processing and cell cycle regulation. Mol. Cell. Biol., 22, 8415-8425 (Pubitemid 35397158)
    • (2002) Molecular and Cellular Biology , vol.22 , Issue.24 , pp. 8415-8425
    • Campbell, S.G.1    Del Olmo, M.L.2    Beglan, P.3    Bond, U.4
  • 20
    • 49449101414 scopus 로고    scopus 로고
    • Terminating transcription in yeast: Whether to be a 'nerd' or a 'rat'
    • Rondon, A.G., Mischo, H.E. and Proudfoot, N.J. (2008) Terminating transcription in yeast: whether to be a 'nerd' or a 'rat'. Nat. Struct. Mol. Biol., 15, 775-776
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 775-776
    • Rondon, A.G.1    Mischo, H.E.2    Proudfoot, N.J.3
  • 21
    • 0032502825 scopus 로고    scopus 로고
    • Coupling termination of transcription to messenger RNA maturation in yeast
    • DOI 10.1126/science.280.5361.298
    • Birse, C.E., Minvielle-Sebastia, L., Lee, B.A., Keller, W. and Proudfoot, N.J. (1998) Coupling termination of transcription to messenger RNA maturation in yeast. Science, 280, 298-301 (Pubitemid 28178076)
    • (1998) Science , vol.280 , Issue.5361 , pp. 298-301
    • Birse, C.E.1    Minvielle-Sebastia, L.2    Lee, B.A.3    Keller, W.4    Proudfoot, N.J.5
  • 22
    • 2342453900 scopus 로고    scopus 로고
    • Multiple protein/protein and protein/RNA interactions suggest roles for yeast DNA/RNA helicase Sen1p in transcription, transcription-coupled DNA repair and RNA processing
    • DOI 10.1093/nar/gkh561
    • Ursic, D., Chinchilla, K., Finkel, J.S. and Culbertson, M.R. (2004) Multiple protein/protein and protein/RNA interactions suggest roles for yeast DNA/RNA helicase Sen1p in transcription, transcription-coupled DNA repair and RNA processing. Nucleic Acids Res., 32, 2441-2452 (Pubitemid 38854798)
    • (2004) Nucleic Acids Research , vol.32 , Issue.8 , pp. 2441-2452
    • Ursic, D.1    Chinchilla, K.2    Finkel, J.S.3    Culbertson, M.R.4
  • 24
    • 42449145171 scopus 로고    scopus 로고
    • Molecular dissection of mRNA poly(A) tail length control in yeast
    • DOI 10.1093/nar/gkn080
    • Viphakone, N., Voisinet-Hakil, F. and Minvielle-Sebastia, L. (2008) Molecular dissection of mRNA poly(A) tail length control in yeast. Nucleic Acids Res., 36, 2418-2433 (Pubitemid 351567013)
    • (2008) Nucleic Acids Research , vol.36 , Issue.7 , pp. 2418-2433
    • Viphakone, N.1    Voisinet-Hakil, F.2    Minvielle-Sebastia, L.3
  • 25
    • 74249094928 scopus 로고    scopus 로고
    • Sen1p performs two genetically separable functions in transcription and processing of U5 small nuclear RNA in Saccharomyces cerevisiae
    • Finkel, J.S., Chinchilla, K., Ursic, D. and Culbertson, M.R. (2010) Sen1p performs two genetically separable functions in transcription and processing of U5 small nuclear RNA in Saccharomyces cerevisiae. Genetics, 184, 107-118
    • (2010) Genetics , vol.184 , pp. 107-118
    • Finkel, J.S.1    Chinchilla, K.2    Ursic, D.3    Culbertson, M.R.4
  • 27
    • 79955475464 scopus 로고    scopus 로고
    • Unravelling the means to an end: RNA polymerase II transcription termination
    • Kuehner, J.N., Pearson, E.L. and Moore, C. (2011) Unravelling the means to an end: RNA polymerase II transcription termination. Nat. Rev. Mol. Cell. Biol., 12, 283-294
    • (2011) Nat. Rev. Mol. Cell. Biol. , vol.12 , pp. 283-294
    • Kuehner, J.N.1    Pearson, E.L.2    Moore, C.3
  • 29
    • 0033960962 scopus 로고    scopus 로고
    • A nuclear 3'-5' exonuclease involved in mRNA degradation interacts with poly(A) polymerase and the hnRNA protein Np13p
    • DOI 10.1128/MCB.20.2.604-616.2000
    • Burkard, K.T. and Butler, J.S. (2000) A nuclear 30-50 exonuclease involved in mRNA degradation interacts with Poly(A) polymerase and the hnRNA protein Npl3p. Mol. Cell. Biol., 20, 604-616 (Pubitemid 30023102)
    • (2000) Molecular and Cellular Biology , vol.20 , Issue.2 , pp. 604-616
    • Burkard, K.T.D.1    Butler, J.S.2
  • 30
    • 34250895717 scopus 로고    scopus 로고
    • Widespread use of poly(A) tail length control to accentuate expression of the yeast transcriptome
    • DOI 10.1261/rna.569407
    • Beilharz, T.H. and Preiss, T. (2007) Widespread use of poly(A) tail length control to accentuate expression of the yeast transcriptome. RNA, 13, 982-997 (Pubitemid 46984890)
    • (2007) RNA , vol.13 , Issue.7 , pp. 982-997
    • Beilharz, T.H.1    Preiss, T.2
  • 31
    • 0035819859 scopus 로고    scopus 로고
    • Regulation of mRNA stability in mammalian cells
    • DOI 10.1016/S0378-1119(01)00350-X, PII S037811190100350X
    • Guhaniyogi, J. and Brewer, G. (2001) Regulation of mRNA stability in mammalian cells. Gene, 265, 11-23 (Pubitemid 32209246)
    • (2001) Gene , vol.265 , Issue.1-2 , pp. 11-23
    • Guhaniyogi, J.1    Brewer, G.2
  • 32
    • 69449094660 scopus 로고    scopus 로고
    • The CCR4-NOT complex physically and functionally interacts with TRAMP and the nuclear exosome
    • Azzouz, N., Panasenko, O.O., Colau, G. and Collart, M.A. (2009) The CCR4-NOT complex physically and functionally interacts with TRAMP and the nuclear exosome. PLoS One, 4, e6760
    • (2009) PLoS One , vol.4
    • Azzouz, N.1    Panasenko, O.O.2    Colau, G.3    Collart, M.A.4
  • 33
    • 13744256106 scopus 로고    scopus 로고
    • 1 and S phases is CCR4 dependent following ionizing radiation or replication stress in Saccharomyces cerevisiae
    • DOI 10.1128/EC.3.2.430-446.2004
    • Westmoreland, T.J., Marks, J.R., Olson, J.A. Jr, Thompson, E.M., Resnick, M.A. and Bennett, C.B. (2004) Cell cycle progression in G1 and S phases is CCR4 dependent following ionizing radiation or replication stress in Saccharomyces cerevisiae. Eukaryot. Cell, 3, 430-446 (Pubitemid 38497982)
    • (2004) Eukaryotic Cell , vol.3 , Issue.2 , pp. 430-446
    • Westmoreland, T.J.1    Marks, J.R.2    Olson Jr., J.A.3    Thompson, E.M.4    Resnick, M.A.5    Bennett, C.B.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.