Soil microbial community analysis of between no-till and tillage in a controlled horticultural field

World Journal of Microbiology and Biotechnology

Volumn 28, Issue 4, 2012, Pages 1797-1801

  Yang, Seung Koo ^a   Kim, Min Keun ^b   Seo, Youn Won ^a   Choi, Kyung Ju ^a   Lee, Seong Tae ^b   Kwak, Youn Sig ^c   Lee, Young Han ^b  

^a Jeollanam do Agricultural Research and Extension Services   (South Korea)

^b Gyeongsangnam do Agricultural Research and Extension Service   (South Korea)

^c Gyeongsang National University   (South Korea)

Author keywords

Fatty acid methyl ester (FAME); Microbial community; No till; Organic farming

Indexed keywords

ARBUSCULAR MYCORRHIZAL FUNGI; FATTY ACID METHYL ESTER; GRAM-POSITIVE BACTERIUM; MICROBIAL COMMUNITIES; MICROBIAL COMMUNITY; NO-TILL; ORGANIC FARMING; SOIL MICROBIAL COMMUNITY;

AGRICULTURAL MACHINERY; BACTERIA; ESTERIFICATION; ESTERS; FUNGI; SOILS;

AGRICULTURE;

ARTICLE; BACTERIUM; BIOTA; CLASSIFICATION; COMPARATIVE STUDY; FUNGUS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; ORGANIC FARMING;

BACTERIA; BIOTA; FUNGI; ORGANIC AGRICULTURE; SOIL MICROBIOLOGY;

ACTINOBACTERIA; ACTINOBACTERIA (CLASS); ARBUSCULAR; FUNGI; POSIBACTERIA;

EID: 84859267425     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-011-0933-x     Document Type: Article

References (20)

1. Arthurson V (2011) Storage conditions and animal source influence the dominant bacterial community composition in animal manure. World J Microbiol Biotechnol 27: 2013-2022.
2. Balser T, Treseder KK, Ekenler M (2005) Using lipid analysis and hyphal length to quantifyAM and saprotrophic fungal abundance along a soil chronosequence. Soil Biol Biochem 37: 601-604.
3. Drenovsky RE (2004) Soil water content and organic carbon availability are major determinants of soil microbial community composition. Microb Ecol 48: 424-430.
4. Frostegård Å, Bååth E (1996) The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol Fert Soils 22: 59-65.
5. Frostegård Å, Tunlid A, Bååth E (1993) Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl Environ Microbiol 59: 3605-3617.
6. Grogan DW, Cronan JE (1997) Cyclopropane ring formation in membrane lipids of bacteria. Microbiol Mol Biol Rev 61: 429-441.
7. Guckert JB, Hood MA, White DC (1986) Phospholipid ester-linked fatty acid profile changes during nutrient deprivation of Vibrio cholerae: increases in cis/trans ratio and proportions of cyclopropyl fatty acid. Appl Environ Microbiol 52: 794-801.
8. Hamman ST, Burke IC, Strombeerger ME (2007) Relationships between microbial community structure and soil environmental conditions in a recently burned system. Soil Biol Biochem 39: 1703-1711.
9. Islam MR, Trivedi P, Palaniappan P, Reddy MS, Sa T (2009) Evaluating the effect of fertilizer application on soil microbial community structure in rice based cropping system using fatty acid methyl esters (FAME) analysis. World J Microbiol Biotechnol 25: 1115-1117.
10. Kieft TL, Wilch E, O'connor K, Ringelberg DB, White DC (1997) Survival and phospholipid fatty acid profiles of surface and subsurface bacteria in natural sediment microcosms. Appl Environ Microbiol 63: 1531-1542.
11. Macalady JL, Fuller ME, Scow KM (1998) Effects of metam sodium fumigation on soil microbial activity and community structure. J Environ Qual 27: 54-63.
12. Meriles JM, Gil SV, Conforto C, Figoni G, Locera E, March GJ, Guzman CA (2009) Soil microbial communities under different soybean cropping systems: Characterization of microbial population dynamics, soil microbial activity, microbial biomass, and fatty acid profiles. Soil Till Res 103: 271-281.
13. Miñambres GG, Conles MY, Lucini EI, Verdenelli RA, Meriles JM, Zygadlo JA (2010) Application of thymol and iprodione to control garlic white rot (Sclerotium cepivorum) and its effect on soil microbial communities. World J Microbiol Biotechnol 26: 161-170.
14. Nelson KL, Brozel VS, Gibson SA, Thaler R, Clay SA (2011) Influence of manure from pigs fed chlortetracycline as growth promotant on soil microbial community structure. World J Microbiol Biotechnol 27: 659-668.
15. Patra AK, Le Roux X, Grayston SJ, Loiseau P, Louault F (2008) Unraveling the effects of management regime and plant species on soil organic carbon and microbial phospholipid fatty acid profiles in grassland soils. Bioresour Technol 99: 3545-3551.
16. Schutter ME, Dick RP (2000) Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities. Soil Sci Soc Am J 64: 1659-1668.
17. Stahl PD, Klug MJ (1996) Characterization and differentiation of filamentous fungi based on fatty acid composition. Appl Environ Microbiol 62: 4136-4146.
18. Steenwerth KL, Jackson LE, Calderon FJ, Stromberg MR, Scow KM (2003) Soil microbial community composition and land use history in cultivated and grassland ecosystems of coastal California. Soil Biol Biochem 35: 489-500.
19. Wright AL, Hons FM, Matocha JE Jr (2005) Tillage impacts on microbial biomass and soil carbon and nitrogen dynamics of corn and cotton rotations. Appl Soil Ecol 29: 85-92.
20. Zelles L (1997) Phospholipid fatty acid profiles in selected members of soil microbial communities. Chemosphere 35: 275-294.