Mytoe: Automatic analysis of mitochondrial dynamics

Bioinformatics

Volumn 28, Issue 7, 2012, Pages 1050-1051

  Lihavainen, Eero ^a   Mäkelä, Jarno ^a   Spelbrink, Johannes N ^a,b   Ribeiro, Andre S ^a  

^a TAMPERE UNIVERSITY OF TECHNOLOGY   (Finland)

^b RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; CLUSTER ANALYSIS; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; FLUORESCENCE MICROSCOPY; HUMAN; IMAGE PROCESSING; METHODOLOGY; MITOCHONDRION; PHYSIOLOGY; TUMOR CELL LINE;

CELL LINE, TUMOR; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; COMPUTER GRAPHICS; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MICROSCOPY, FLUORESCENCE; MITOCHONDRIA; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 84859259201     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts073     Document Type: Article

References (13)

1. Beraud, N. et al. (2009) Mitochondrial dynamics in heart cells: very low amplitude high frequency fluctuations in adult cardiomyocytes and flow motion in non beating HL-1 cells. J. Bioenerg. Biomembr., 41, 195-214.
2. Bouguet, J.-Y. (2000) Pyramidal implementation of the Lucas-Kanade feature tracker. Technical Report, Intel Corporation, Microprocessor Research Labs.
3. Gerencser, A. et al. (2008) Measurement of instantaneous velocity vectors of organelle transport: mitochondrial transport and bioenergetics in hippocampal neurons. Biophys. J., 95, 3079-3099.
4. Guo, Z. et al. (1989) Parallel thinning with two-subiteration algorithms. Commun. ACM, 32, 359-373.
5. Koopman, W. et al. (2005) Simultaneous quantitative measurement and automated analysis of mitochondrial morphology, mass, potential, and motility in living human skin fibroblasts. Cytometry A, 69A, 1-12.
6. Lucas, B. et al. (1981) An iterative image registration technique with an application to stereo vision. In Proceedings of the 7th International Joint Conference on Artificial Intelligence (IJCAI '81), Vancouver, B.C., Canada, pp. 674-679.
7. Otsu, N. (1979) A threshold selection method from gray level histograms. IEEE Trans. Syst. Man Cybern., 9, 62-66.
8. Saunter, C. et al. (2009) Stochastically determined directed movement explains the dominant small-scale mitochondrial movements within non-neuronal tissue culture cells. FEBS Lett., 583, 1267-1273.
9. Silberberg, Y.R. et al. (2008) Tracking displacements of intracellular organelles in response to nanomechanical forces. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium. Paris, France, pp. 1335-1338.
10. Soille, P. (2003) Morphological Image Analysis: Principles and Applications. 2nd edn. Springer New York, Inc., Secaucus, NJ, USA.
11. Song, W. et al. (2008) Assessing mitochondrial morphology and dynamics using fluorescence wide-field microscopy and 3D image processing. Methods, 46, 295-303.
12. Westermann, B. (2010) Mitochondrial fusion and fission in cell life and death. Nat. Rev. Mol. Cell Biol., 11, 872-884.
13. Yi, M. et al. (2004) Control of mitochondrial motility and distribution by the calcium signal: a homeostatic circuit. J. Cell Biol., 167, 661-72.