Genetic and chemical diversity of citron (Citrus medica L.) based on nuclear and cytoplasmic markers and leaf essential oil composition

Phytochemistry

Volumn 77, Issue , 2012, Pages 186-196

  Luro, Franois ^a   Venturini, Nicolas ^b   Costantino, Gilles ^a   Paolini, Julien ^b   Ollitrault, Patrick ^c   Costa, Jean ^b  

^a Station INRA   (France)

^b UNIVERSITÉ DE CORSE   (France)

^c CIRAD   (France)

Author keywords

Citron; Citrus medica; cpSSR; Essential oil; GC; GC MS; Genetic; Leaf

Indexed keywords

ESSENTIAL OIL;

ARTICLE; CELL NUCLEUS; CHEMISTRY; CITRUS; CYTOPLASM; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; MASS FRAGMENTOGRAPHY; PHYLOGENY; PLANT LEAF; SOUTHERN EUROPE;

CELL NUCLEUS; CITRUS; CYTOPLASM; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GENETIC MARKERS; MEDITERRANEAN REGION; OILS, VOLATILE; PHYLOGENY; PLANT LEAVES; POLYMORPHISM, GENETIC;

CITRUS; CITRUS MEDICA;

EID: 84859163008     PISSN: 00319422     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.phytochem.2011.12.013     Document Type: Article

References (57)

1. R.P. Adams Identification of Essential Oil Components by Gas Chromatography/Quadrupole Mass Spectroscopy 2001 Allured Publishing Illinois
2. N.A. Barkley, M.L. Roose, R.R. Krueger, and C.T. Federici Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs) Theor. Appl. Genet. 112 2006 1519 1531
3. H.C. Barrett, and A.M. Rhodes A numerical taxonomic study of the affinity relationships in cultivated Citrus and its close relatives Syst. Bot. 1 1976 105 136
4. Belkhir, K., Borsa, P., Chikhi, L., Raufaste, N., Bonhomme, F., 2002. Genetix 4.04, logiciel sous Windows TM pour la génétique des populations. Edited by CNRS UMR 5000, Université de Montpellier II Montpellier: Laboratoire Génome, Populations, Interactions.
5. P.K. Bretting, and M.P. Widrlechner Genetic markers and plant genetic resource management Plant Breed. Rev. 13 1995 11 86
6. G.J. Bryan, J. McNicoll, G. Ramsay, R.C. Meyer, and W.S.D. Jong Polymorphic simple sequence repeat markers in chloroplast genomes of Solanaceous plants Theor. Appl. Genet. 99 1999 859 867
7. C.M. Cabasson, F. Luro, P. Ollitrault, and J.W. Grosser Non-random inheritance of mitochondrial genomes in Citrus hybrids produced by protoplast fusion Plant Cell Rep. 20 2001 604 609
8. B.A. Chalhoub, S. Thibault, V. Laucoou, C. Rameau, H. Höfte, and R. Cousin Silver staining and recovery of AFLP amplification products on large denaturing polyacrylamide gels Bio. Tech. 22 1997 216 220
9. Y. Cheng, M. Carmen De Vicente, H. Meng, W. Guo, N. Tao, and X. Deng A set of primers for analyzing chloroplast DNA diversity in Citrus and related genera Tree Physiol. 25 2005 661 672
10. Citrus variety collection University of California Riverside http://www.citrusvariety.ucr.edu/citrus/s-1citron.html.
11. L. Dice Measure of the amount of ecologic association between species Ecology 26 1945 297 302
12. J.J. Doyle, and J.L. Doyle A rapid DNA isolation procedure for small quantities of fresh leaf tissue Phytochem. Bull. 19 1987 11 15
13. D.Q. Fang, and M.L. Roose Identification of closely related citrus cultivars with inter-simple sequence repeat markers Theor. Appl. Genet. 95 1997 408 417
14. Y. Froelicher, D. Dambier, G. Costantino, S. Lotfy, C. Didout, V. Beaumont, P. Brottier, A.M. Risterucci, F. Luro, and P. Ollitrault Characterization of microsatellite markers in Citrus reticulata Blanco Mol. Ecol. Res. 8 2008 119 122
15. Y. Froelicher, W. Mouhaya, J.B. Bassene, G. Costantino, M. Kamiri, F. Luro, R. Morillon, and P. Ollitrault New universal mitochondrial PCR markers reveal new information on maternal citrus phylogeny Tree Genet. Genomes 7 2010 47 61
16. F.G. Gmitter, and X. Hu The possible role of Yunnan, China, in the origin of contemporary Citrus species (Rutaceae) Econ. Bot. 44 1990 237 277
17. X. Guo, and R.C. Elston Linkage information content of polymorphic genetic markers Hum. Hered. 49 1999 112 118
18. T. Handa, Y. Ishizawa, and C. Oogaki Phylogenic study of Fraction I protein in the genus Citrus and its close related genera Japan. J. Genet. 61 1986 15 24
19. Y. Huang, and Z. Pu The chemical composition of the leaf essential oils from 110 citrus species, cultivars, hybrids and varieties of Chinese origin Perfum. Flavor. 25 2000 53 66
20. R. Huet Les huiles essentielles d'agrumes Fruits 46 1991 501 513
21. I. Jantan, A.S. Ahmad, A.R. Ahmad, N.A.M. Ali, and N. Ayop Chemical composition of some Citrus oils from Malaysia J. Essent. Oil Res. 8 1996 627 632
22. S.N. Jena, S. Kumar, and N.K. Nair Molecular phylogeny in Indian Citrus L (Rutaceae) inferred through PCR-RFLP and trnL-trnF sequence data of chloroplast DNA Sci. Hort. 119 2009 403 416
23. W.A. König, D.H. Hochmuth, and D. Joulain Terpenoids and Related Constituents of Essential Oils. Library of MassFinder 2.1 2001 University of Hamburg, Institute of Organic Chemistry Hamburg
24. B.M. Lawrence Lime Oil Essential Oils 1995 Allured Publishing Carol Stream 117 118
25. X. Li, and R. Xie The origin of cultivated citrus as inferred from internal transcribed spacer and chloroplast DNA sequence and amplified fragment length polymorphism fingerprints J. Amer. Soc. Hort. Sci. 135 2010 341 350
26. Loret, V., 1997. Le cédratier dans l'antiquité. Connaissance et Mémoires Européennes.
27. M.L. Lota, D. de Rocca Serra, F. Tomi, J.M. Bessiere, and J. Casanova Chemical composition of peel and leaf essential oils of Citrus medica L and C. limonimedica Lush Flavour Frag. J. 14 1999 161 166
28. M.L. Lota, D. de Rocca Serra, F. Tomi, and J. Casanova Chemical variability of peel and leaf essential oils of 15 species of mandarins Biochem. Syst. Ecol. 29 2001 77 104
29. M.L. Lota, D. de Rocca Serra, F. Tomi, C. Jacquemond, and J. Casanova Volatile components of peel and leaf oils of lemon and lime species J. Agric. Food Chem. 50 2002 796 805
30. Luro, F., Rist, D., Ollitrault, P., 2001. Evaluation of genetic relationships in Citrus genus by means of sequence tagged microsatellites. In: Proceedings of the International Symposium on Molecular markers for characterizing genotypes and identifying cultivars in horticulture: 6-8 march 2000; Montpellier. Edited by Doré C, Dosba F, Baril C. ISHS Acta Horticultarae. 546, 537-542.
31. F. Luro, G. Costantino, X. Argout, Y. Froelicher, J. Terol, M. Talon, P. Wincker, P. Ollitrault, and R. Morillon Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping BMC Genomics 9 2008 287 304
32. F.W. McLafferty, and D.B. Stauffer Wiley Registry of Mass Spectral Data, 6th edn. Mass Spectrometry Library Search System Bench-Top/PBM version 3.10d 1994 Palisade Newfield
33. National Institute of Standards and Technology NIST/EPA/NIH Mass Spectra Library. PC Version 1.7 1999 Perkin Elmer Corp
34. G.A. Moore Oranges and lemons: clues to the taxonomy of Citrus from molecular markers Trends in Genetics 9 2001 536 540
35. M. Nei Estimation of average heterozygosity and genetic distance from a small number of individuals Genetics 89 1978 583 590
36. E. Nicolosi, Z.N. Deng, A. Gentile, S. La Malfa, G. Continella, and E. Tribulato Citrus phylogeny and genetic origin of important species as investigated by molecular markers Theor. Appl. Genet. 100 2000 1155 1166
37. E. Nicolosi Origin and Taxonomy I.A. Khan, Citrus Genetics, Breeding and Biotechnology 2007 CABI Oxfordshire, UK 19 43
38. E. Nicolosi, S. La Malfa, M. El-Otmani, M. Negbi, and E.E. Goldschmidt The search for the authentic citron (Citrus medica L.): historic and genetic analysis HortScience 40 2005 1963 1968
39. P. Ollitrault, C. Jacquemond, C. Dubois, and F. Luro Citrus Hamon Seguin Perrier Glaszmann Genetic diversity of cultivated tropical plants 2003 Science publishers Montpellier 193 197
40. X. Perrier, A. Flori, and F. Bonnot Methods for data analysis Hamon Seguin Perrier Glaszmann Genetic Diversity of Cultivated Tropical Plants 2003 Science publishers Montpellier 21 63
41. D. Pessina, R. Gentili, G. Barcaccia, S. Nicol, G. Rossi, S. Barbesti, and S. Sgorbati DNA content, morphometric and molecular marker analyses of Citrus limonimedica, C. limon and C. medica for the determination of their variability and genetic relationships within the genus Citrus Sci. Hort. 129 2011 663 673
42. A. Risso, and A. Poiteau Histoire naturelle des orangers. Réédition 2000 1818 Connaissance & Mémoires Paris, FR
43. G. Ruberto Analysis of volatile components of Citrus fruit essential oils Jackson Linskens Inman Analysis of taste and aroma 2002 Springer-Verlag Berlin Heidelberg New York 123 157
44. R.W. Scora On the history and origin of citrus Bull. Torrey Bot. Club. 102 1975 369 375
45. W.T. Swingle, and P.C. Reece The Botany of Citrus and its Wild Relatives The Citrus Industry 1967 University of California Press Berkeley: Reuthen, Webber and Batchelor 190 430
46. T. Tanaka Citologia: Semicentennial Commemoration Papers on Citrus Studies 1961 Citologia Supporting Foundation Osaka
47. S. Tolkowsky Hesperides: a History of the culture and use of Citrus fruits 1938 John Bale sons and Curnow Ltd. London
48. F. Tomi, M. Barzalona, J. Casanova, and F. Luro Chemical variability of the leaf oils from Citrus clementina (Commun) × Citrus deliciosa (Willow Leaf) hybrids Flavour Frag. J. 23 2008 152 163
49. A.M. Torres, R.K. Soost, and U. Diedenhofen Leaf isozymes as genetic markers in Citrus Am. J. Bot. 65 1978 869 881
50. A. Uzun, T. Yesiloglu, Y. Aka-Kacar, O. Tuzcu, and O. Gulsen Genetic diversity and relationships within Citrus and related genera based on sequence related amplified polymorphism markers (SRAPs) Sci. Hort. 121 2009 306 312
51. S.A. Vekiari, E.E. Protopapadakis, P. Papadopoulos, and N. Argyriadou-Giannovits Variation in the essential oils of citron leaves and peel infected by exocortis disease J. Horti Sci. Biotech. 77 2002 428 431
52. S.A. Vekiari, E.E. Protopapadakis, and N. Argyriadou-Giannovits Composition of the leaf and peel oils of Citrus medica L. "Diamante" from Crete J. Essent. Oil Res 16 2004 528 530
53. N. Venturini, F. Curk, J.M. Desjobert, D. Karp, J. Costa, and J. Paolini Chemotaxonomic investigations of peel and petitgrain essential oils from 17 citron cultivars Chem. Biodiversity 7 2010 736 751
54. H.J. Webber, W. Reuther, and H.W. Lawton History and Development of the Citrus Industry Reuthen Webber Batchelor The Citrus Industry. Volume 1 1967 University of California Press Berkeley 1 39
55. B.S. Weir, and C.C. Cockerham Estimating F-statistics for the analysis of population structure Evolution 38 1984 1358 1370
56. K. Weising, and R.C. Gardner A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms Genome 42 1999 9 19
57. S. Wright Evolution and the genetics of populations, volume 2 1969 University of Chicago Press Chicago