Identification and characterization of microcin S, a new antibacterial peptide produced by probiotic Escherichia coli G3/10

PLoS ONE

Volumn 7, Issue 3, 2012, Pages

  Zschüttig, Anke ^a   Zimmermann, Kurt ^b   Blom, Jochen ^c   Goesmann, Alexander ^c   Pöhlmann, Christoph ^d   Gunzer, Florian ^a  

^a DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

^b SymbioPharm GmbH   (Germany)

^c BIELEFELD UNIVERSITY   (Germany)

^d ROBERT BOSCH HOSPITAL   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARABINOSE; MICROCIN S; POLYPEPTIDE ANTIBIOTIC AGENT; UNCLASSIFIED DRUG; ANTIINFECTIVE AGENT; BACTERIAL DNA; BACTERIOCIN; ESCHERICHIA COLI PROTEIN; MICROCIN; PEPTIDE; PROBIOTIC AGENT;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ADHERENCE; CONTROLLED STUDY; ENTEROPATHOGENIC ESCHERICHIA COLI; ESCHERICHIA COLI; GENE CLUSTER; GENE EXPRESSION; HUMAN; HUMAN CELL; IN VITRO STUDY; INTESTINE EPITHELIUM CELL; MCSL GENE; MCSS GENE; MICROCIN S GENE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPERON; PLASMID; PROTEIN ANALYSIS; CELL STRAIN CACO 2; CHEMISTRY; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENE ORDER; GENETICS; METABOLISM; MICROBIAL VIABILITY; MOLECULAR GENETICS; MULTIGENE FAMILY; TUMOR CELL LINE;

ESCHERICHIA COLI;

AMINO ACID SEQUENCE; ANTI-BACTERIAL AGENTS; BACTERIAL ADHESION; BACTERIOCINS; CACO-2 CELLS; CELL LINE, TUMOR; DNA, BACTERIAL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENE ORDER; HUMANS; MICROBIAL VIABILITY; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; OPERON; PEPTIDES; PLASMIDS; PROBIOTICS; SEQUENCE ANALYSIS, DNA;

EID: 84859141889     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0033351     Document Type: Article

References (43)

1. Chiuchiolo MJ, Delgado MA, Farias RN, Salomon RA, (2001) Growth-phase-dependent expression of the cyclopeptide antibiotic microcin J25. J Bacteriol 183: 1755-1764.
2. Connell N, Han Z, Moreno F, Kolter R, (1987) An E. coli promoter induced by the cessation of growth. Mol Microbiol 1: 195-201.
3. Fomenko D, Veselovskii A, Khmel I, (2001) Regulation of microcin C51 operon expression: the role of global regulators of transcription. Res Microbiol 152: 469-479.
4. Hernandez-Chico C, San Millan JL, Kolter R, Moreno F, (1986) Growth phase and ompR regulation of transcription of microcin B17 genes. J Bacteriol 167: 1058-1065.
5. Baquero F, Bouanchaud D, Martinez-Perez MC, Fernandez C, (1978) Microcin plasmids: a group of extrachromosomal elements coding for low-molecular-weight antibiotics in Escherichia coli. J Bacteriol 135: 342-347.
6. Novoa MA, Diaz-Guerra L, San Millan JL, Moreno F, (1986) Cloning and mapping of the genetic determinants for microcin C7 production and immunity. J Bacteriol 168: 1384-1391.
7. O'Brien GJ, Mahanty HK, (1994) Colicin 24, a new plasmid-borne colicin from a uropathogenic strain of Escherichia coli. Plasmid 31: 288-296.
8. Salomon RA, Farias RN, (1992) Microcin 25, a novel antimicrobial peptide produced by Escherichia coli. J Bacteriol 174: 7428-7435.
9. San Millan JL, Hernandez-Chico C, Pereda P, Moreno F, (1985) Cloning and mapping of the genetic determinants for microcin B17 production and immunity. J Bacteriol 163: 275-281.
10. Waters VL, Crosa JH, (1991) Colicin V virulence plasmids. Microbiol Rev 55: 437-450.
11. Poey ME, Azpiroz MF, Lavina M, (2006) Comparative analysis of chromosome-encoded microcins. Antimicrob Agents Chemother 50: 1411-1418.
12. Patzer SI, Baquero MR, Bravo D, Moreno F, Hantke K, (2003) The colicin G, H and X determinants encode microcins M and H47, which might utilize the catecholate siderophore receptors FepA, Cir, Fiu and IroN. Microbiology 149: 2557-2570.
13. Enck P, Zimmermann K, Menke G, Klosterhalfen S, (2009) Randomized controlled treatment trial of irritable bowel syndrome with a probiotic E.-coli preparation (DSM17252) compared to placebo. Z Gastroenterol 47: 209-214.
14. Martens U, Enck P, Zieseniss E, (2010) Probiotic treatment of irritable bowel syndrome in children. Ger Med Sci 8: Doc07.
15. Guarner F, Schaafsma GJ, (1998) Probiotics. Int J Food Microbiol 39: 237-238.
16. Kuipers A, Rink R, Moll GN, (2011) Genetics, Biosynthesis, Structure, and Mode of Action of Lantibiotics. In: Drider D, Rebuffat S, editors. Prokaryotic Antimicrobial Peptides: From Genes to Applications Berlin Springer pp. 147-169.
17. Hetz C, Bono MR, Barros LF, Lagos R, (2002) Microcin E492, a channel-forming bacteriocin from Klebsiella pneumoniae, induces apoptosis in some human cell lines. Proc Natl Acad Sci U S A 99: 2696-2701.
18. Dicks LMT, Heunis TDJ, van Staden DA, Brand A, Sutyak Noll K, et al. (2011) Medical and Personal Care Applications of Bacteriocins Produced by Lactic Acid Bacteria. In: Drider D, Rebuffat S, editors. Prokaryotic Antimicrobial Peptides: From Genes to Applications Berlin Springer pp. 392-421.
19. Gillor O, Kirkup BC, Riley MA, (2004) Colicins and microcins: the next generation antimicrobials. Adv Appl Microbiol 54: 129-146.
20. Donnenberg MS, Kaper JB, (1992) Enteropathogenic Escherichia coli. Infect Immun 60: 3953-3961.
21. Kleta S, Steinrück H, Breves G, Duncker S, Laturnus C, et al. (2006) Detection and distribution of probiotic Escherichia coli Nissle 1917 clones in swine herds in Germany. J Appl Microbiol 101: 1357-1366.
22. Ong CL, Beatson SA, McEwan AG, Schembri MA, (2009) Conjugative plasmid transfer and adhesion dynamics in an Escherichia coli biofilm. Appl Environ Microbiol 75: 6783-6791.
23. Pósfai G, Plunkett G III, Fehér T, Frisch D, Keil GM, et al. (2006) Emergent Properties of Reduced-Genome Escherichia coli. Science 312: 1044-1046.
24. Asensio C, Perez-Diaz JC, (1976) A new family of low molecular weight antibiotics from enterobacteria. Biochem Biophys Res Commun 69: 7-14.
25. Finn RD, Mistry J, Tate J, Coggill P, Heger A, et al. (2010) The Pfam protein families database. Nucleic Acids Res 38: D211-D222.
26. Duquesne S, Destoumieux-Garzon D, Peduzzi J, Rebuffat S, (2007) Microcins, gene-encoded antibacterial peptides from enterobacteria. Nat Prod Rep 24: 708-734.
27. Rebuffat S, (2011) Bacteriocins from Gram-Negative Bacteria: A Classification? In: Drider D, Rebuffat S, editors. Prokaryotic Antimicrobial Peptides: From Genes to Applications Berlin Springer pp. 55-80.
28. Havarstein LS, Holo H, Nes IF, (1994) The leader peptide of colicin V shares consensus sequences with leader peptides that are common among peptide bacteriocins produced by gram-positive bacteria. Microbiology 140 (Pt 9): 2383-2389.
29. Pons AM, Delalande F, Duarte M, Benoit S, Lanneluc I, et al. (2004) Genetic analysis and complete primary structure of microcin L. Antimicrob Agents Chemother 48: 505-513.
30. Holland IB, Schmitt L, Young J, (2005) Type 1 protein secretion in bacteria, the ABC-transporter dependent pathway. Mol Membr Biol 22: 29-39.
31. Chehade H, Braun V, (1988) Iron-regulated synthesis and uptake of colicin V. FEMS Microbiology Letters 52: 177-181.
32. Datsenko KA, Wanner BL, (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97: 6640-6645.
33. Zhang Y, Buchholz F, Muyrers JP, Stewart AF, (1998) A new logic for DNA engineering using recombination in Escherichia coli. Nat Genet 20: 123-128.
34. Sanger F, Nicklen S, Coulson AR, (1992) DNA sequencing with chain-terminating inhibitors. 1977. Biotechnology 24: 104-108.
35. Miller HJ, (1992) A Short Course in Bacterial Genetics: A Laboratory Manual and Handbook for Escherichia coli and Related Bacteria. In: Harbor ColdSpring, editors. N.Y.: Cold Spring Harbor Laboratory Press.
36. Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, et al. (2003) GenDB-an open source genome annotation system for prokaryote genomes. Nucleic Acids Res 31: 2187-2195.
37. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
38. Drewinko B, Yang LY, Barlogie B, Romsdahl M, Meistrich M, et al. (1978) Further biologic characteristics of a human carcinoembryonic antigen-producing colon carcinoma cell line. J Natl Cancer Inst 61: 75-83.
39. Rousset M, (1986) The human colon carcinoma cell lines HT-29 and Caco-2: two in vitro models for the study of intestinal differentiation. Biochimie 68: 1035-1040.
40. Drexler HG, Dirks W, MacLeod RAF, Quentmeier H, Steube KG, et al. (2001) DSMZ Catalogue of human and animal cell lines. 8th ed.
41. Grant JR, Stothard P, (2008) The CGView Server: a comparative genomics tool for circular genomes. Nucleic Acids Res 36: W181-W184.
42. Nissle A, (1916) Über die Grundlagen einer neuen ursächlichen Bekämpfung der pathologischen Darmflora. Dt Med Wschr 42: 1181-1184.
43. Pósfai G, Koob MD, Kirkpatrick HA, Blattner FR, (1997) Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome. J Bacteriol 179: 4426-4428.