New detection modality for label-free quantification of DNA in biological samples via superparamagnetic bead aggregation

Journal of the American Chemical Society

Volumn 134, Issue 12, 2012, Pages 5689-5696

  Leslie, Daniel C ^a,e   Li, Jingyi ^a   Strachan, Briony C ^a   Begley, Matthew R ^d   Finkler, David ^a   Bazydlo, Lindsay A L ^a,c   Barker, N Scott ^b   Haverstick, Doris M ^c   Utz, Marcel ^a,b   Landers, James P ^a,b,c  

^a UNIVERSITY OF VIRGINIA   (United States)

^b University of Virginia   (United States)

^c UNIVERSITY OF VIRGINIA   (United States)

^d University of California   (United States)

^e HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL SAMPLES; CELL COUNTING; CHAOTROPE; DNA DETECTION; DNA PURIFICATION; EUKARYOTIC CELLS; FLUOROMETRIC ASSAY; FUNCTIONALIZED BEADS; LABEL FREE; MAGNETIC STIRRERS; MICRO-SCALES; MICROLITERS; OPTICAL DETECTION; OPTICAL IMAGE; QUANTIFICATION OF DNAS; ROTATING MAGNETIC FIELDS; SUPERPARAMAGNETIC BEADS;

GEOMETRICAL OPTICS; MAGNETIC FIELDS; OLIGONUCLEOTIDES; SEDIMENTATION; SUPERPARAMAGNETISM;

DNA;

DNA; NANOBEAD; SUPERPARAMAGNETIC BEAD; UNCLASSIFIED DRUG;

ARTICLE; CELL COUNT; COMPUTER; DNA DETERMINATION; EUKARYOTIC CELL; FLUOROMETRY; HUMAN; HUMAN TISSUE;

DNA; HUMANS; MAGNETICS; MAGNETS; NUCLEIC ACID HYBRIDIZATION; SENSITIVITY AND SPECIFICITY;

EID: 84859131435     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja300839n     Document Type: Article

References (34)

1. Sassolas, A.; Leca-Bouvier, B. D.; Blum, L. J. Chem. Rev. 2007, 108, 109
2. Voet, D.; Voet, J. G. Biochemistry, 3 rd ed.; J. Wiley & Sons: New York, 2004.
3. Gallagher, S. R. In Current Protocols in Molecular Biology; John Wiley & Sons, Inc.: New York, 2001.
4. Al-Soud, W. A.; Jonsson, L. J.; Radstrom, P. J. Clin. Microbiol. 2000, 38, 345
5. Izreli, S.; Pfleiderer, C.; Lion, T. Nucleic Acids Res. 1991, 19, 6051
6. Akane, A.; Matsubara, K.; Nakamura, H.; Takahashi, S.; Kimura, K. J. Forensic Sci. 1994, 39, 362
7. Burns, M.; Valdivia, H. Eur. Food Res. Technol. 2008, 226, 1513
8. Melzak, K. A.; Sherwood, C. S.; Turner, R. F. B.; Haynes, C. A. J. Colloid Interface Sci. 1996, 181, 635
9. Otto, P. J. Assoc. Lab. Autom. 2002, 7, 34
10. Gijs, M. A. M. Microfluid. Nanofluid. 2004, 1, 22
11. Furst, E. M.; Suzuki, C.; Fermigier, M.; Gast, A. P. Langmuir 1998, 14, 7334
12. Goubault, C.; Leal-Calderon, F.; Viovy, J.-L.; Bibette, J. Langmuir 2005, 21, 3725
13. Goubault, C.; Jop, P.; Fermigier, M.; Baudry, J.; Bertrand, E.; Bibette, J. Phys. Rev. Lett. 2003, 91, 260802
14. Koenig, A.; Hébraud, P.; Gosse, C.; Dreyfus, R.; Baudry, J.; Bertrand, E.; Bibette, J. Phys. Rev. Lett. 2005, 95, 128301
15. Biswal, S. L.; Gast, A. P. Phys. Rev. E 2003, 68, 021402
16. Li, D.; Rogers, J.; Biswal, S. L. Langmuir 2009, 25, 8944
17. Ahniyaz, A.; Sakamoto, Y.; Bergström, L. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 17570
18. Osterman, N.; Poberaj, I.; Dobnikar, J.; Frenkel, D.; Ziherl, P.; Babić, D. Phys. Rev. Lett. 2009, 103, 228301
19. Smallenburg, F.; Dijkstra, M. J. Chem. Phys. 2010, 132, 8
20. Breadmore, M. C.; Wolfe, K. A.; Arcibal, I. G.; Leung, W. K.; Dickson, D.; Giordano, B. C.; Power, M. E.; Ferrance, J. P.; Feldman, S. H.; Norris, P. M.; Landers, J. P. Anal. Chem. 2003, 75, 1880
21. Price, C. W.; Leslie, D. C.; Landers, J. P. Lab Chip 2009, 9, 2484
22. Tietz Fundamentals of Clinical Chemistry, 5 th ed.; Burtis, C. A.; Ashwood, E. R., Eds.; W. B. Saunders: Philadelphia, 2001.
23. Bain, B. J. A beginner's guide to blood cells, 2 nd ed.; Blackwell: Malden, MA, 2004.
24. Swarup, V.; Rajeswari, M. R. FEBS Lett. 2007, 581, 795
25. Butler, J. M. Forensic DNA typing: Biology, Technology, and Genetics of STR Markers, 2 nd ed.; Elsevier Academic Press: Burlington, MA, 2005.
26. Leslie, D. C.; Sohrabi, A.; Ikonomi, P.; McKee, M. L.; Landers, J. P. Electrophoresis 2010, 31, 1615
27. Elghanian, R.; Storhoff, J. J.; Mucic, R. C.; Letsinger, R. L.; Mirkin, C. A. Science 1997, 277, 1078
28. Reynolds, R. A.; Mirkin, C. A.; Letsinger, R. L. J. Am. Chem. Soc. 2000, 122, 3795
29. Li, H.; Rothberg, L. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 14036
30. Storhoff, J. J.; Lucas, A. D.; Garimella, V.; Bao, Y. P.; Muller, U. R. Nat. Biotechnol. 2004, 22, 883
31. Taton, T. A.; Mirkin, C. A.; Letsinger, R. L. Science 2000, 289, 1757
32. Fermigier, M.; P. Gast, A. J. Magn. Magn. Mater. 1993, 122, 46
33. Nayak, N.; Yue, C.; Lam, Y.; Tan, Y. Microsystem Technol. 2010, 16, 487
34. Ridler, T. W.; Calvard, S. Systems, Man Cybernetics, IEEE Trans. 1978, 8, 630