-
1
-
-
79955477986
-
Effect of transmitted drug resistance on virological and immunological response to initial combination antiretroviral therapy for HIV (EuroCoord-CHAIN joint project): a European multicohort study
-
Wittkop L, Gunthard HF, de Wolf F, Dunn D, Cozzi-Lepri A, et al. (2011) Effect of transmitted drug resistance on virological and immunological response to initial combination antiretroviral therapy for HIV (EuroCoord-CHAIN joint project): a European multicohort study. Lancet Infect Dis 11: 363-371.
-
(2011)
Lancet Infect Dis
, vol.11
, pp. 363-371
-
-
Wittkop, L.1
Gunthard, H.F.2
de Wolf, F.3
Dunn, D.4
Cozzi-Lepri, A.5
-
2
-
-
47249109877
-
The World Health Organization's global strategy for prevention and assessment of HIV drug resistance
-
Bennett DE, Bertagnolio S, Sutherland D, Gilks CF, (2008) The World Health Organization's global strategy for prevention and assessment of HIV drug resistance. Antivir Ther 13 (Suppl 2): 1-13.
-
(2008)
Antivir Ther
, vol.13
, Issue.SUPPL. 2
, pp. 1-13
-
-
Bennett, D.E.1
Bertagnolio, S.2
Sutherland, D.3
Gilks, C.F.4
-
3
-
-
47249105176
-
Recommendations for surveillance of transmitted HIV drug resistance in countries scaling up antiretroviral treatment
-
Bennett DE, Myatt M, Bertagnolio S, Sutherland D, Gilks CF, (2008) Recommendations for surveillance of transmitted HIV drug resistance in countries scaling up antiretroviral treatment. Antivir Ther 13 (Suppl 2): 25-36.
-
(2008)
Antivir Ther
, vol.13
, Issue.SUPPL. 2
, pp. 25-36
-
-
Bennett, D.E.1
Myatt, M.2
Bertagnolio, S.3
Sutherland, D.4
Gilks, C.F.5
-
4
-
-
70450233644
-
Treatment of HIV infection: Swedish recommendations 2009
-
Josephson F, Albert J, Flamholc L, Gisslen M, Karlström O, et al. (2009) Treatment of HIV infection: Swedish recommendations 2009. Scand J Infect Dis 41: 788-807.
-
(2009)
Scand J Infect Dis
, vol.41
, pp. 788-807
-
-
Josephson, F.1
Albert, J.2
Flamholc, L.3
Gisslen, M.4
Karlström, O.5
-
5
-
-
46349112103
-
Antiretroviral drug resistance testing in adult HIV-1 infection: 2008 recommendations of an International AIDS Society-USA panel
-
Hirsch MS, Gunthard HF, Schapiro JM, Brun-Vezinet F, Clotet B, et al. (2008) Antiretroviral drug resistance testing in adult HIV-1 infection: 2008 recommendations of an International AIDS Society-USA panel. Clin Infect Dis 47: 266-285.
-
(2008)
Clin Infect Dis
, vol.47
, pp. 266-285
-
-
Hirsch, M.S.1
Gunthard, H.F.2
Schapiro, J.M.3
Brun-Vezinet, F.4
Clotet, B.5
-
6
-
-
80053065898
-
European recommendations for the clinical use of HIV drug resistance testing: 2011 update
-
Vandamme AM, Camacho RJ, Ceccherini-Silberstein F, de Luca A, Palmisano L, et al. (2011) European recommendations for the clinical use of HIV drug resistance testing: 2011 update. AIDS Rev 13: 77-108.
-
(2011)
AIDS Rev
, vol.13
, pp. 77-108
-
-
Vandamme, A.M.1
Camacho, R.J.2
Ceccherini-Silberstein, F.3
de Luca, A.4
Palmisano, L.5
-
7
-
-
34247628907
-
Evidence of a decline in transmitted HIV-1 drug resistance in the United Kingdom
-
UK Collaborative Group on HIV Drug Resistance; UK Collaborative HIV Cohort Study; UK Register of HIV Seroconverters
-
UK Collaborative Group on HIV Drug Resistance; UK Collaborative HIV Cohort Study; UK Register of HIV Seroconverters (2007) Evidence of a decline in transmitted HIV-1 drug resistance in the United Kingdom. AIDS 21: 1035-1039.
-
(2007)
AIDS
, vol.21
, pp. 1035-1039
-
-
-
8
-
-
37349088627
-
Transmission of HIV-1 drug resistance in Switzerland: a 10-year molecular epidemiology survey
-
Yerly S, von Wyl V, Ledergerber B, Boni J, Schupbach J, et al. (2007) Transmission of HIV-1 drug resistance in Switzerland: a 10-year molecular epidemiology survey. AIDS 21: 2223-2229.
-
(2007)
AIDS
, vol.21
, pp. 2223-2229
-
-
Yerly, S.1
von Wyl, V.2
Ledergerber, B.3
Boni, J.4
Schupbach, J.5
-
9
-
-
78049297965
-
Prevalence of transmitted drug resistance and impact of transmitted resistance on treatment success in the German HIV-1 Seroconverter Cohort
-
Bartmeyer B, Kuecherer C, Houareau C, Werning J, Keeren K, et al. (2010) Prevalence of transmitted drug resistance and impact of transmitted resistance on treatment success in the German HIV-1 Seroconverter Cohort. PLoS One 5: e12718.
-
(2010)
PLoS One
, vol.5
-
-
Bartmeyer, B.1
Kuecherer, C.2
Houareau, C.3
Werning, J.4
Keeren, K.5
-
10
-
-
78249258106
-
Increasing prevalence of transmitted drug resistance mutations and non-B subtype circulation in antiretroviral-naive chronically HIV-infected patients from 2001 to 2006/2007 in France
-
Descamps D, Chaix ML, Montes B, Pakianather S, Charpentier C, et al. (2010) Increasing prevalence of transmitted drug resistance mutations and non-B subtype circulation in antiretroviral-naive chronically HIV-infected patients from 2001 to 2006/2007 in France. J Antimicrob Chemother 65: 2620-2627.
-
(2010)
J Antimicrob Chemother
, vol.65
, pp. 2620-2627
-
-
Descamps, D.1
Chaix, M.L.2
Montes, B.3
Pakianather, S.4
Charpentier, C.5
-
11
-
-
77951877448
-
Prevalence of transmitted drug resistance associated mutations and HIV-1 subtypes in new HIV-1 diagnoses, U.S.-2006
-
Wheeler WH, Ziebell RA, Zabina H, Pieniazek D, Prejean J, et al. (2010) Prevalence of transmitted drug resistance associated mutations and HIV-1 subtypes in new HIV-1 diagnoses, U.S.-2006. AIDS 24: 1203-1212.
-
(2010)
AIDS
, vol.24
, pp. 1203-1212
-
-
Wheeler, W.H.1
Ziebell, R.A.2
Zabina, H.3
Pieniazek, D.4
Prejean, J.5
-
12
-
-
82455163716
-
Molecular Phylogenetics of Transmitted Drug Resistance in Newly Diagnosed HIV Type 1 Individuals in Denmark, a Nation-Wide Study
-
Audelin AM, Gerstoft J, Obel N, Mathiesen L, Laursen A, et al. (2011) Molecular Phylogenetics of Transmitted Drug Resistance in Newly Diagnosed HIV Type 1 Individuals in Denmark, a Nation-Wide Study. AIDS Res Hum Retroviruses.
-
(2011)
AIDS Res Hum Retroviruses
-
-
Audelin, A.M.1
Gerstoft, J.2
Obel, N.3
Mathiesen, L.4
Laursen, A.5
-
13
-
-
41449090659
-
Transmission of drug-resistant HIV-1 in Europe remains limited to single classes
-
SPREAD programme
-
SPREAD programme. (2008) Transmission of drug-resistant HIV-1 in Europe remains limited to single classes. AIDS 22: 625-635.
-
(2008)
AIDS
, vol.22
, pp. 625-635
-
-
-
14
-
-
70449723682
-
Transmission of drug-resistant HIV-1 is stabilizing in Europe
-
Vercauteren J, Wensing AM, van de Vijver DA, Albert J, Balotta C, et al. (2009) Transmission of drug-resistant HIV-1 is stabilizing in Europe. J Infect Dis 200: 1503-1508.
-
(2009)
J Infect Dis
, vol.200
, pp. 1503-1508
-
-
Vercauteren, J.1
Wensing, A.M.2
van de Vijver, D.A.3
Albert, J.4
Balotta, C.5
-
15
-
-
0027723675
-
Transmission of zidovudine-resistant HIV-1
-
Sönnerborg A, Johansson B, Ayehunie S, Julander I, (1993) Transmission of zidovudine-resistant HIV-1. AIDS 7: 1684-1685.
-
(1993)
AIDS
, vol.7
, pp. 1684-1685
-
-
Sönnerborg, A.1
Johansson, B.2
Ayehunie, S.3
Julander, I.4
-
16
-
-
0242294762
-
Limited transmission of drug-resistant HIV type 1 in 100 Swedish newly detected and drug-naive patients infected with subtypes A, B, C, D, G, U, and CRF01_AE
-
Maljkovic I, Wilbe K, Sölver E, Alaeus A, Leitner T, (2003) Limited transmission of drug-resistant HIV type 1 in 100 Swedish newly detected and drug-naive patients infected with subtypes A, B, C, D, G, U, and CRF01_AE. AIDS Res Hum Retroviruses 19: 989-997.
-
(2003)
AIDS Res Hum Retroviruses
, vol.19
, pp. 989-997
-
-
Maljkovic, I.1
Wilbe, K.2
Sölver, E.3
Alaeus, A.4
Leitner, T.5
-
17
-
-
33845677677
-
HIV-1 transmission cluster with M41L 'singleton' mutation and decreased transmission of resistance in newly diagnosed Swedish homosexual men
-
Lindström A, Ohlis A, Huigen M, Nijhuis M, Berglund T, et al. (2006) HIV-1 transmission cluster with M41L 'singleton' mutation and decreased transmission of resistance in newly diagnosed Swedish homosexual men. Antivir Ther 11: 1031-1039.
-
(2006)
Antivir Ther
, vol.11
, pp. 1031-1039
-
-
Lindström, A.1
Ohlis, A.2
Huigen, M.3
Nijhuis, M.4
Berglund, T.5
-
18
-
-
73549105233
-
Prevalence of drug resistance and importance of viral load measurements in Honduran HIV-infected patients failing antiretroviral treatment
-
Murillo W, de Rivera IL, Parham L, Jovel E, Palou E, et al. (2010) Prevalence of drug resistance and importance of viral load measurements in Honduran HIV-infected patients failing antiretroviral treatment. HIV Med 11: 95-103.
-
(2010)
HIV Med
, vol.11
, pp. 95-103
-
-
Murillo, W.1
de Rivera, I.L.2
Parham, L.3
Jovel, E.4
Palou, E.5
-
19
-
-
55849107771
-
HIV-1 drug resistance genotyping quality assessment: results of the ENVA7 Genotyping Proficiency Programme
-
Pandit A, Mackay WG, Steel C, van Loon AM, Schuurman R, (2008) HIV-1 drug resistance genotyping quality assessment: results of the ENVA7 Genotyping Proficiency Programme. J Clin Virol 43: 401-406.
-
(2008)
J Clin Virol
, vol.43
, pp. 401-406
-
-
Pandit, A.1
Mackay, W.G.2
Steel, C.3
van Loon, A.M.4
Schuurman, R.5
-
20
-
-
62749200513
-
Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update
-
Bennett DE, Camacho RJ, Otelea D, Kuritzkes DR, Fleury H, et al. (2009) Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update. PLoS One 4: e4724.
-
(2009)
PLoS One
, vol.4
-
-
Bennett, D.E.1
Camacho, R.J.2
Otelea, D.3
Kuritzkes, D.R.4
Fleury, H.5
-
21
-
-
65449166369
-
The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance
-
Gifford RJ, Liu TF, Rhee SY, Kiuchi M, Hue S, et al. (2009) The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance. Bioinformatics 25: 1197-1198.
-
(2009)
Bioinformatics
, vol.25
, pp. 1197-1198
-
-
Gifford, R.J.1
Liu, T.F.2
Rhee, S.Y.3
Kiuchi, M.4
Hue, S.5
-
22
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysisprogram for Windows 95/98/NT
-
Hall TA, (1999) BioEdit: a user-friendly biological sequence alignment editor and analysisprogram for Windows 95/98/NT. Nucl Acids Symp Ser 41: 95-98.
-
(1999)
Nucl Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
23
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
24
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
-
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, et al. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
-
25
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
26
-
-
78149306494
-
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load
-
Alizon S, von Wyl V, Stadler T, Kouyos RD, Yerly S, et al. (2010) Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load. PLoS Pathog 6: e1001123.
-
(2010)
PLoS Pathog
, vol.6
-
-
Alizon, S.1
von Wyl, V.2
Stadler, T.3
Kouyos, R.D.4
Yerly, S.5
-
27
-
-
77951882045
-
Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland
-
Kouyos RD, von Wyl V, Yerly S, Boni J, Taffe P, et al. (2010) Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland. J Infect Dis 201: 1488-1497.
-
(2010)
J Infect Dis
, vol.201
, pp. 1488-1497
-
-
Kouyos, R.D.1
von Wyl, V.2
Yerly, S.3
Boni, J.4
Taffe, P.5
-
28
-
-
78650045775
-
Dynamics of two separate but linked HIV-1 CRF01_AE outbreaks among injection drug users in Stockholm, Sweden, and Helsinki, Finland
-
Skar H, Axelsson M, Berggren I, Thalme A, Gyllensten K, et al. (2011) Dynamics of two separate but linked HIV-1 CRF01_AE outbreaks among injection drug users in Stockholm, Sweden, and Helsinki, Finland. J Virol 85: 510-518.
-
(2011)
J Virol
, vol.85
, pp. 510-518
-
-
Skar, H.1
Axelsson, M.2
Berggren, I.3
Thalme, A.4
Gyllensten, K.5
-
29
-
-
79952267805
-
Update of the drug resistance mutations in HIV-1: December 2010
-
Johnson VA, Brun-Vezinet F, Clotet B, Gunthard HF, Kuritzkes DR, et al. (2010) Update of the drug resistance mutations in HIV-1: December 2010. Top HIV Med 18: 156-163.
-
(2010)
Top HIV Med
, vol.18
, pp. 156-163
-
-
Johnson, V.A.1
Brun-Vezinet, F.2
Clotet, B.3
Gunthard, H.F.4
Kuritzkes, D.R.5
-
30
-
-
79953837870
-
HIV-1 drug resistance mutations among antiretroviral-naive HIV-1-infected patients in Asia: results from the TREAT Asia Studies to Evaluate Resistance-Monitoring Study
-
Sungkanuparph S, Oyomopito R, Sirivichayakul S, Sirisanthana T, Li PC, et al. (2011) HIV-1 drug resistance mutations among antiretroviral-naive HIV-1-infected patients in Asia: results from the TREAT Asia Studies to Evaluate Resistance-Monitoring Study. Clin Infect Dis 52: 1053-1057.
-
(2011)
Clin Infect Dis
, vol.52
, pp. 1053-1057
-
-
Sungkanuparph, S.1
Oyomopito, R.2
Sirivichayakul, S.3
Sirisanthana, T.4
Li, P.C.5
-
31
-
-
0034732201
-
Viral load and heterosexual transmission of human immunodeficiency virus type 1. Rakai Project Study Group
-
Quinn TC, Wawer MJ, Sewankambo N, Serwadda D, Li C, et al. (2000) Viral load and heterosexual transmission of human immunodeficiency virus type 1. Rakai Project Study Group. N Engl J Med 342: 921-929.
-
(2000)
N Engl J Med
, vol.342
, pp. 921-929
-
-
Quinn, T.C.1
Wawer, M.J.2
Sewankambo, N.3
Serwadda, D.4
Li, C.5
-
32
-
-
77953293984
-
Heterosexual HIV-1 transmission after initiation of antiretroviral therapy: a prospective cohort analysis
-
Donnell D, Baeten JM, Kiarie J, Thomas KK, Stevens W, et al. (2010) Heterosexual HIV-1 transmission after initiation of antiretroviral therapy: a prospective cohort analysis. Lancet 375: 2092-2098.
-
(2010)
Lancet
, vol.375
, pp. 2092-2098
-
-
Donnell, D.1
Baeten, J.M.2
Kiarie, J.3
Thomas, K.K.4
Stevens, W.5
-
33
-
-
68449085124
-
Sexual transmission of HIV according to viral load and antiretroviral therapy: systematic review and meta-analysis
-
Attia S, Egger M, Muller M, Zwahlen M, Low N, (2009) Sexual transmission of HIV according to viral load and antiretroviral therapy: systematic review and meta-analysis. AIDS 23: 1397-1404.
-
(2009)
AIDS
, vol.23
, pp. 1397-1404
-
-
Attia, S.1
Egger, M.2
Muller, M.3
Zwahlen, M.4
Low, N.5
-
34
-
-
80055025831
-
Increase of Transmitted Drug Resistance among HIV-Infected Sub-Saharan Africans Residing in Spain in Contrast to the Native Population
-
Yebra G, de Mulder M, Perez-Elias MJ, Perez-Molina JA, Galan JC, et al. (2011) Increase of Transmitted Drug Resistance among HIV-Infected Sub-Saharan Africans Residing in Spain in Contrast to the Native Population. PLoS One 6: e26757.
-
(2011)
PLoS One
, vol.6
-
-
Yebra, G.1
de Mulder, M.2
Perez-Elias, M.J.3
Perez-Molina, J.A.4
Galan, J.C.5
-
35
-
-
80053293363
-
HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: a multicentre observational study
-
Hamers RL, Wallis CL, Kityo C, Siwale M, Mandaliya K, et al. (2011) HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: a multicentre observational study. Lancet Infect Dis 11: 750-759.
-
(2011)
Lancet Infect Dis
, vol.11
, pp. 750-759
-
-
Hamers, R.L.1
Wallis, C.L.2
Kityo, C.3
Siwale, M.4
Mandaliya, K.5
-
36
-
-
68449091365
-
The impact of transmission clusters on primary drug resistance in newly diagnosed HIV-1 infection
-
Yerly S, Junier T, Gayet-Ageron A, Amari EB, von Wyl V, et al. (2009) The impact of transmission clusters on primary drug resistance in newly diagnosed HIV-1 infection. AIDS 23: 1415-1423.
-
(2009)
AIDS
, vol.23
, pp. 1415-1423
-
-
Yerly, S.1
Junier, T.2
Gayet-Ageron, A.3
Amari, E.B.4
von Wyl, V.5
-
37
-
-
34447554516
-
Prevalence and determinants of transmitted antiretroviral drug resistance in HIV-1 infection
-
Booth CL, Geretti AM, (2007) Prevalence and determinants of transmitted antiretroviral drug resistance in HIV-1 infection. J Antimicrob Chemother 59: 1047-1056.
-
(2007)
J Antimicrob Chemother
, vol.59
, pp. 1047-1056
-
-
Booth, C.L.1
Geretti, A.M.2
-
38
-
-
79953745195
-
Low-frequency HIV-1 drug resistance mutations and risk of NNRTI-based antiretroviral treatment failure: a systematic review and pooled analysis
-
Li JZ, Paredes R, Ribaudo HJ, Svarovskaia ES, Metzner KJ, et al. (2011) Low-frequency HIV-1 drug resistance mutations and risk of NNRTI-based antiretroviral treatment failure: a systematic review and pooled analysis. JAMA 305: 1327-1335.
-
(2011)
JAMA
, vol.305
, pp. 1327-1335
-
-
Li, J.Z.1
Paredes, R.2
Ribaudo, H.J.3
Svarovskaia, E.S.4
Metzner, K.J.5
|