-
1
-
-
0035941390
-
Acute HIV infection: Impact on the spread of HIV and transmission of drug resistance
-
Yerly S, Vora S, Rizzardi P, Chave JP, Vernazza PL, Flepp M, et al. Acute HIV infection: impact on the spread of HIV and transmission of drug resistance. AIDS 2001; 15:2287-2292.
-
(2001)
AIDS
, vol.15
, pp. 2287-2292
-
-
Yerly, S.1
Vora, S.2
Rizzardi, P.3
Chave, J.P.4
Vernazza, P.L.5
Flepp, M.6
-
2
-
-
3042734981
-
Infrequent transmission of HIV-1 drug-resistant variants
-
Yerly S, Jost S, Telenti A, Flepp M, Kaiser L, Chave JP, et al. Infrequent transmission of HIV-1 drug-resistant variants. Anti-vir Ther 2004; 9:375-384.
-
(2004)
Anti-vir Ther
, vol.9
, pp. 375-384
-
-
Yerly, S.1
Jost, S.2
Telenti, A.3
Flepp, M.4
Kaiser, L.5
Chave, J.P.6
-
3
-
-
12144254038
-
Transmission of HIV-1 during primary infection: Relationship to sexual risk and sexually transmitted infections
-
Pao D, Fisher M, Hué S, Dean G, Murphy G, Cane PA, et al. Transmission of HIV-1 during primary infection: relationship to sexual risk and sexually transmitted infections. AIDS 2005; 19:85-90.
-
(2005)
AIDS
, vol.19
, pp. 85-90
-
-
Pao, D.1
Fisher, M.2
Hué, S.3
Dean, G.4
Murphy, G.5
Cane, P.A.6
-
4
-
-
15444367844
-
Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups
-
HuéS, Pillay D, Clewley JP, Pybus OG. Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups. Proc Natl Acad Sci U S A 2005; 102:4425-4429.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 4425-4429
-
-
Hué, S.1
Pillay, D.2
Clewley, J.P.3
Pybus, O.G.4
-
5
-
-
33947375214
-
High rates of forward transmission events after acute/early HIV-1 infection
-
Brenner BG, Roger M, Routy JP, Moisi D, Ntemgwa M, Matte C, et al. High rates of forward transmission events after acute/early HIV-1 infection. J Infect Dis 2007; 195:951-959.
-
(2007)
J Infect Dis
, vol.195
, pp. 951-959
-
-
Brenner, B.G.1
Roger, M.2
Routy, J.P.3
Moisi, D.4
Ntemgwa, M.5
Matte, C.6
-
6
-
-
41549160713
-
Episodic sexual transmission of HIV revealed by molecular phylodynamics
-
Lewis F, Hughes GJ, Rambaut A, Pozniak A, Leigh Brown AJ. Episodic sexual transmission of HIV revealed by molecular phylodynamics. PLoS Med 2008; 5:392-402.
-
(2008)
PLoS Med
, vol.5
, pp. 392-402
-
-
Lewis, F.1
Hughes, G.J.2
Rambaut, A.3
Pozniak, A.4
Leigh Brown, A.J.5
-
7
-
-
33747790265
-
-
Lohse N, Obel N, Kronborg G, Jørgensen LB, Pedersen C, Larsen CS, et al. Declining prevalence of HIV-infected individuals at risk of transmitting drug-resistant HIV in Denmark during 1997-2004. Antivir Ther 2006; 11:591-600.
-
Lohse N, Obel N, Kronborg G, Jørgensen LB, Pedersen C, Larsen CS, et al. Declining prevalence of HIV-infected individuals at risk of transmitting drug-resistant HIV in Denmark during 1997-2004. Antivir Ther 2006; 11:591-600.
-
-
-
-
8
-
-
63649085185
-
Long-term trends of HIV type 1 drug resistance prevalence among antiretroviral treatment-experienced patients in Switzerland
-
von Wyl V, Yerly S, Bürgisser P, Klimkait T, Battegay M, Bernasconi E, et al. Long-term trends of HIV type 1 drug resistance prevalence among antiretroviral treatment-experienced patients in Switzerland. Clin Infect Dis 2009; 48:979-987.
-
(2009)
Clin Infect Dis
, vol.48
, pp. 979-987
-
-
von Wyl, V.1
Yerly, S.2
Bürgisser, P.3
Klimkait, T.4
Battegay, M.5
Bernasconi, E.6
-
9
-
-
53149150221
-
Population trends in the prevalence and patterns of protease resistance related to exposure to unboosted and boosted protease inhibitors
-
Dunn D, Geretti AM, Green H, Fearnhill E, Pozniak A, Churchill D, et al. Population trends in the prevalence and patterns of protease resistance related to exposure to unboosted and boosted protease inhibitors. Antivir Ther 2008; 13:771-777.
-
(2008)
Antivir Ther
, vol.13
, pp. 771-777
-
-
Dunn, D.1
Geretti, A.M.2
Green, H.3
Fearnhill, E.4
Pozniak, A.5
Churchill, D.6
-
10
-
-
34547927815
-
Changing rates and patterns of drug resistance mutations in antiretroviral-experienced HIV-infected patients
-
de Mendoza C, Garrido C, Corral A, Ramfrez-Olivencia G, Jiménez-Nacher I, Zahonero N, et al. Changing rates and patterns of drug resistance mutations in antiretroviral-experienced HIV-infected patients. AIDS Res Hum Retroviruses 2007; 23:879-885.
-
(2007)
AIDS Res Hum Retroviruses
, vol.23
, pp. 879-885
-
-
de Mendoza, C.1
Garrido, C.2
Corral, A.3
Ramfrez-Olivencia, G.4
Jiménez-Nacher, I.5
Zahonero, N.6
-
11
-
-
31344445595
-
Time trends in primary resistance to HIV drugs in the United Kingdom: Multicentre observational study
-
Cane P, Chrystie I, Dunn D, Evans B, Geretti AM, Green H, et al. Time trends in primary resistance to HIV drugs in the United Kingdom: multicentre observational study. BMJ 2005; 331: 1368.
-
(2005)
BMJ
, vol.331
, pp. 1368
-
-
Cane, P.1
Chrystie, I.2
Dunn, D.3
Evans, B.4
Geretti, A.M.5
Green, H.6
-
12
-
-
20244384565
-
-
Descamps D, Chaix ML, André P, Brodard V, Cottalorda J, Deveau C, et al. French national sentinel survey of antiretroviral drug resistance in patients with HIV-1 primary infection and in antiretroviral-naive chronically infected patients in 2001-2002. J Acquir Immune Defic Syndr 2005; 38:545-552.
-
Descamps D, Chaix ML, André P, Brodard V, Cottalorda J, Deveau C, et al. French national sentinel survey of antiretroviral drug resistance in patients with HIV-1 primary infection and in antiretroviral-naive chronically infected patients in 2001-2002. J Acquir Immune Defic Syndr 2005; 38:545-552.
-
-
-
-
13
-
-
33646812239
-
Tracking the prevalence of transmitted antiretroviral drug-resistant HIV-1: A decade of experience
-
Wensing AM, van de Vijver DA, Angarano G, Asjö B, Balotta C, Boeri E, et al. Tracking the prevalence of transmitted antiretroviral drug-resistant HIV-1: a decade of experience. J Acquir Immune Defic Synd 2006; 41:439-946.
-
(2006)
J Acquir Immune Defic Synd
, vol.41
, pp. 439-946
-
-
Wensing, A.M.1
van de Vijver, D.A.2
Angarano, G.3
Asjö, B.4
Balotta, C.5
Boeri, E.6
-
14
-
-
34548779666
-
Trends of prevalence of primary HIV drug resistance in Germany
-
Sagir A, Oette M, Kaiser R, Däumer M, Fätkenheuer G, Rock-stroh JK, et al. Trends of prevalence of primary HIV drug resistance in Germany. J Antimicrob Chemother 2007; 60: 843-848.
-
(2007)
J Antimicrob Chemother
, vol.60
, pp. 843-848
-
-
Sagir, A.1
Oette, M.2
Kaiser, R.3
Däumer, M.4
Fätkenheuer, G.5
Rock-stroh, J.K.6
-
15
-
-
37349088627
-
Transmission of HIV-1 drug resistance in Switzerland: A 10-year molecular epidemiology survey
-
Yerly S, von Wyl V, Ledergerber B, Böni J, Schüpbach J, Bürgisser P, et al. Transmission of HIV-1 drug resistance in Switzerland: a 10-year molecular epidemiology survey. AIDS 2007; 21:2223-2229.
-
(2007)
AIDS
, vol.21
, pp. 2223-2229
-
-
Yerly, S.1
von Wyl, V.2
Ledergerber, B.3
Böni, J.4
Schüpbach, J.5
Bürgisser, P.6
-
16
-
-
55249118583
-
-
Buskin SE, Ellis GM, Pepper GG, Frenkel LM, Pergam SA, Gottlieb GS, et al. Transmission cluster of multiclass highly drug-resistant HIV-1 among 9 men who have sex with men in Seattle/King County, WA, 2005-2007. J Acquir Immune Defic Syndr 2008; 49:205-211.
-
Buskin SE, Ellis GM, Pepper GG, Frenkel LM, Pergam SA, Gottlieb GS, et al. Transmission cluster of multiclass highly drug-resistant HIV-1 among 9 men who have sex with men in Seattle/King County, WA, 2005-2007. J Acquir Immune Defic Syndr 2008; 49:205-211.
-
-
-
-
17
-
-
52049120424
-
Phylogenetic investigation of transmission pathways of drug-resistant HIV-1 utilizing pol sequences derived from resistance genotyping
-
Kaye M, Chibo D, Birch C. Phylogenetic investigation of transmission pathways of drug-resistant HIV-1 utilizing pol sequences derived from resistance genotyping. J Acquir Immune Defic Syndr 2008; 49:9-16.
-
(2008)
J Acquir Immune Defic Syndr
, vol.49
, pp. 9-16
-
-
Kaye, M.1
Chibo, D.2
Birch, C.3
-
18
-
-
84869585244
-
-
Swiss Federal Office of Public Health
-
Swiss Federal Office of Public Health. VIH et sida (http://www.bag.admin. ch/hiv-aids).
-
VIH et sida
-
-
-
19
-
-
0033612928
-
Transmission of antiretroviral-drug-resistant HIV-1 variants
-
Yerly S, Kaiser L, Race E, Bru JP, Clavel F, Perrin L. Transmission of antiretroviral-drug-resistant HIV-1 variants. Lancet 1999; 354:729-733.
-
(1999)
Lancet
, vol.354
, pp. 729-733
-
-
Yerly, S.1
Kaiser, L.2
Race, E.3
Bru, J.P.4
Clavel, F.5
Perrin, L.6
-
20
-
-
33845943963
-
HIV-1 protease and reverse transcriptase mutations for drug resistance surveillance
-
Shafer RW, Rhee SY, Pillay D, Miller V, Sandstrom P, Schapiro JM, et al. HIV-1 protease and reverse transcriptase mutations for drug resistance surveillance. AIDS 2007; 21:215-223.
-
(2007)
AIDS
, vol.21
, pp. 215-223
-
-
Shafer, R.W.1
Rhee, S.Y.2
Pillay, D.3
Miller, V.4
Sandstrom, P.5
Schapiro, J.M.6
-
21
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003; 52:696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
22
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004; 32:1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
23
-
-
68449100063
-
Spreading of a non-B recombinant form in seroconverting IVDU's
-
abstract, Seattle;
-
Jost S, Yerly S, Kaufmann D, Monnat M, Telenti A, Chave J-P, et al. Spreading of a non-B recombinant form in seroconverting IVDU's. Ninth Conference on Retroviruses and Opportunistic Infections (abstract), Seattle; 2002. p. 17.
-
(2002)
Ninth Conference on Retroviruses and Opportunistic Infections
, pp. 17
-
-
Jost, S.1
Yerly, S.2
Kaufmann, D.3
Monnat, M.4
Telenti, A.5
Chave, J.-P.6
-
24
-
-
46349092759
-
Update of the drug resistance mutations in HIV-1: Spring 2008. Top
-
Johnson VA, Brun-Vezinet F, Clotet B, et al. Update of the drug resistance mutations in HIV-1: Spring 2008. Top HIV Med 2008; 16:62-68.
-
(2008)
HIV Med
, vol.16
, pp. 62-68
-
-
Johnson, V.A.1
Brun-Vezinet, F.2
Clotet, B.3
-
25
-
-
0037055016
-
Time trends in primary HIV-1 drug resistance among recently infected persons
-
Grant RM, Hecht FM, Warmerdam M, Liu L, Liegler T, Petropoulos CJ, et al. Time trends in primary HIV-1 drug resistance among recently infected persons. JAMA 2002; 288:181-188.
-
(2002)
JAMA
, vol.288
, pp. 181-188
-
-
Grant, R.M.1
Hecht, F.M.2
Warmerdam, M.3
Liu, L.4
Liegler, T.5
Petropoulos, C.J.6
-
26
-
-
12144287630
-
Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France
-
Chaix ML, Descamps D, Harzic M, Schneider V, Deveau C, Tamalet C, et al. Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France. AIDS 2003; 17:2635-2643.
-
(2003)
AIDS
, vol.17
, pp. 2635-2643
-
-
Chaix, M.L.1
Descamps, D.2
Harzic, M.3
Schneider, V.4
Deveau, C.5
Tamalet, C.6
-
27
-
-
0037043652
-
Antiretroviral-drug resistance among patients recently infected with HIV
-
Little SJ, Holte S, Routy JP, Daar ES, Markowitz M, Collier AC, et al. Antiretroviral-drug resistance among patients recently infected with HIV. N Engl J Med 2002; 347:385-394.
-
(2002)
N Engl J Med
, vol.347
, pp. 385-394
-
-
Little, S.J.1
Holte, S.2
Routy, J.P.3
Daar, E.S.4
Markowitz, M.5
Collier, A.C.6
-
28
-
-
33846025131
-
Epidemiology of antiretroviral drug resistance in drug-naïve persons
-
Geretti AM. Epidemiology of antiretroviral drug resistance in drug-naïve persons. Curr Opin Infect Dis 2007; 20:22-32.
-
(2007)
Curr Opin Infect Dis
, vol.20
, pp. 22-32
-
-
Geretti, A.M.1
-
29
-
-
10244279142
-
Factors associated with a decrease in the prevalence of drug resistance in newly HIV-1 infected individuals in Montreal
-
Routy JP, Machouf N, Edwardes MD, Brenner BG, Thomas R, Trottier B, et al. Factors associated with a decrease in the prevalence of drug resistance in newly HIV-1 infected individuals in Montreal. AIDS 2004; 18:2305-2312.
-
(2004)
AIDS
, vol.18
, pp. 2305-2312
-
-
Routy, J.P.1
Machouf, N.2
Edwardes, M.D.3
Brenner, B.G.4
Thomas, R.5
Trottier, B.6
-
30
-
-
27444439834
-
Resistance to nonnucleoside reverse-transcriptase inhibitors and prevalence of HIV type 1 non-B subtypes are increasing among persons with recent infection in Spain
-
de Mendoza C, Rodriguez C, Colomina J, Tuset C, Garcia F, et al. Resistance to nonnucleoside reverse-transcriptase inhibitors and prevalence of HIV type 1 non-B subtypes are increasing among persons with recent infection in Spain. Clin Infect Dis 2005; 41:1350-1354.
-
(2005)
Clin Infect Dis
, vol.41
, pp. 1350-1354
-
-
de Mendoza, C.1
Rodriguez, C.2
Colomina, J.3
Tuset, C.4
Garcia, F.5
-
31
-
-
2542427688
-
-
Violin M, Velleca R, Cozzi-Lepri A, Riva C, Grossi PA, Carnevale G, et al. Prevalence of HIV-1 primary drug resistance in seroconverters of the ICoNA cohort over the period 1996-2001. J Acquir Immune Defic Syndr 2004; 36:761-764.
-
Violin M, Velleca R, Cozzi-Lepri A, Riva C, Grossi PA, Carnevale G, et al. Prevalence of HIV-1 primary drug resistance in seroconverters of the ICoNA cohort over the period 1996-2001. J Acquir Immune Defic Syndr 2004; 36:761-764.
-
-
-
-
32
-
-
0035941385
-
Carrier rate of zidovudine-resistant HIV-1: The impact of failing therapy on transmission of resistant strains
-
Goudsmit J, Weverling GJ, van der Hoek L, de Ronde A, Miedema F, Coutinho RA, et al. Carrier rate of zidovudine-resistant HIV-1: the impact of failing therapy on transmission of resistant strains. AIDS 2001; 15:2293-2301.
-
(2001)
AIDS
, vol.15
, pp. 2293-2301
-
-
Goudsmit, J.1
Weverling, G.J.2
van der Hoek, L.3
de Ronde, A.4
Miedema, F.5
Coutinho, R.A.6
-
34
-
-
0034723414
-
A tale of two futures: HIV and antiretroviral therapy in San Francisco
-
Blower SM, Gershengorn HB, Grant RM. A tale of two futures: HIV and antiretroviral therapy in San Francisco. Science 2000; 287:650-654.
-
(2000)
Science
, vol.287
, pp. 650-654
-
-
Blower, S.M.1
Gershengorn, H.B.2
Grant, R.M.3
-
35
-
-
33646812239
-
Tracking the prevalence of transmitted antiretroviral drug-resistant HIV-1: A decade of experience
-
Shet A, Berry L, Mohri H, Mehandru S, Chung C, Kim A, et al. Tracking the prevalence of transmitted antiretroviral drug-resistant HIV-1: a decade of experience. J Acquir Immune Defic Syndr 2006; 41:439-446.
-
(2006)
J Acquir Immune Defic Syndr
, vol.41
, pp. 439-446
-
-
Shet, A.1
Berry, L.2
Mohri, H.3
Mehandru, S.4
Chung, C.5
Kim, A.6
-
36
-
-
62749131195
-
UK Collaborative Group on HIV Drug Resistance. Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naive individuals
-
Hué S, Gifford RJ, Dunn D, Fernhill E, Pillay D, UK Collaborative Group on HIV Drug Resistance. Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naive individuals. J Virol 2009; 83:2645-2654.
-
(2009)
J Virol
, vol.83
, pp. 2645-2654
-
-
Hué, S.1
Gifford, R.J.2
Dunn, D.3
Fernhill, E.4
Pillay, D.5
-
37
-
-
57349137641
-
Transmission networks of drug resistance acquired in primary/early stage HIV infection
-
Brenner BG, Roger M, Moisi DD, et al. Transmission networks of drug resistance acquired in primary/early stage HIV infection. AIDS 2008; 22:2509-2515.
-
(2008)
AIDS
, vol.22
, pp. 2509-2515
-
-
Brenner, B.G.1
Roger, M.2
Moisi, D.D.3
-
38
-
-
3042817611
-
Persistence of multidrug-resistant HIV-1 without antiretroviral treatment 2 years after sexual transmission
-
Delaugerre C, Morand-Joubert L, Chaix ML, Picard O, Marcelin AG, Schneider V, et al. Persistence of multidrug-resistant HIV-1 without antiretroviral treatment 2 years after sexual transmission. Antivir Ther 2004; 9:415-421.
-
(2004)
Antivir Ther
, vol.9
, pp. 415-421
-
-
Delaugerre, C.1
Morand-Joubert, L.2
Chaix, M.L.3
Picard, O.4
Marcelin, A.G.5
Schneider, V.6
-
39
-
-
43949110248
-
Persistence of transmitted drug resistance among subjects with primary human immunodeficiency virus infection
-
Little SJ, Frost SD, Wong JK, Smith DM, Pond SL, Ignacio CC, et al. Persistence of transmitted drug resistance among subjects with primary human immunodeficiency virus infection. J Virol 2008; 82:5510-5518.
-
(2008)
J Virol
, vol.82
, pp. 5510-5518
-
-
Little, S.J.1
Frost, S.D.2
Wong, J.K.3
Smith, D.M.4
Pond, S.L.5
Ignacio, C.C.6
|