메뉴 건너뛰기




Volumn 6, Issue 3, 2012, Pages 310-316

Identification and secondary structure analysis of a region affecting electrophoretic mobility of the STR locus SE33

Author keywords

AmpF STR NGM SElect ; DNA typing; SE33; Stem loop

Indexed keywords

AFRICA; ALLELE; AMPLICON; ARTICLE; ELECTROPHORETIC MOBILITY; FEMALE; GENE; GENE IDENTIFICATION; GENE LOCUS; GENE SEQUENCE; GENE STRUCTURE; HUMAN; MALE; MUTAGENESIS; PRIORITY JOURNAL; SE33 GENE; SINGLE NUCLEOTIDE POLYMORPHISM; THERMOSTABILITY; WILD TYPE;

EID: 84858440252     PISSN: 18724973     EISSN: 18780326     Source Type: Journal    
DOI: 10.1016/j.fsigen.2011.06.008     Document Type: Article
Times cited : (28)

References (25)
  • 1
    • 84858450566 scopus 로고    scopus 로고
    • http://www3.appliedbiosystems.com/cms/groups/applied-markets-marketing/ documents/generaldocuments/cms-088912.pdf.
  • 3
    • 0027285464 scopus 로고
    • Forensic validation of the STR systems SE 33 and TC 11
    • P. Wiegand, B. Budowle, and S.R.B. Brinkmann Forensic validation of the STR systems SE 33 and TC 11 Int. J. Legal Med. 105 1993 315 320
    • (1993) Int. J. Legal Med. , vol.105 , pp. 315-320
    • Wiegand, P.1    Budowle, B.2    Brinkmann, S.R.B.3
  • 4
    • 0030840827 scopus 로고    scopus 로고
    • Sequence polymorphism at the tetranucleotide repeat of the human beta- actin related pseudogene H-beta-Ac-psi-2 (ACTBP2) locus
    • DOI 10.1007/s004140050033
    • B. Rolf, M. Schurenkamp, A. Junge, and B. Brinkmann Sequence polymorphism at the tetranucleotide repeat of the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2) locus Int. J. Legal Med. 110 1997 69 72 (Pubitemid 27286750)
    • (1997) International Journal of Legal Medicine , vol.110 , Issue.2 , pp. 69-72
    • Rolf, B.1    Schurenkamp, M.2    Junge, A.3    Brinkmann, B.4
  • 5
    • 0026509756 scopus 로고
    • Tetranucleotide repeat polymorphism at the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2)
    • M.H. Polymeropoulos, D.S. Rath, H. Xiao, and C.R. Merrill Tetranucleotide repeat polymorphism at the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2) Nucleic Acids Res. 20 1992 1432
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1432
    • Polymeropoulos, M.H.1    Rath, D.S.2    Xiao, H.3    Merrill, C.R.4
  • 6
    • 0034778927 scopus 로고    scopus 로고
    • Frequency data for the STR locus ACTBP2 (SE33) in eight populations
    • DOI 10.1007/s004140100209
    • A. Laszik, P. Sotonyi, S. Rand, and C. Hohoff Frequency data for the STR locus ACTBP2 (SE33) in eight populations Int. J. Legal Med. 115 2001 94 96 (Pubitemid 33009617)
    • (2001) International Journal of Legal Medicine , vol.115 , Issue.2 , pp. 94-96
    • Laszik, A.1    Sotonyi, P.2    Rand, S.3    Hohoff, C.4
  • 7
    • 0345505266 scopus 로고    scopus 로고
    • Sequence variations in the primer binding regions of the highly polymorphic STR system SE33
    • S. Hering, J. Edelmann, and J. Drebler Sequence variations in the primer binding regions of the highly polymorphic STR system SE33 Int. J. Legal Med. 116 2002 365 367 (Pubitemid 36253785)
    • (2002) International Journal of Legal Medicine , vol.116 , Issue.6 , pp. 365-367
    • Hering, S.1    Edelmann, J.2    Dressler, J.3
  • 11
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • M. Zucker On finding all suboptimal foldings of an RNA molecule Science 244 1989 48 52
    • (1989) Science , vol.244 , pp. 48-52
    • Zucker, M.1
  • 12
    • 0020473236 scopus 로고
    • Structure, dynamics, and energetics of deoxyguanosine-thymidine wobble base pair formation in the self-complementary d(CGTGAATTCGCG) duplex in solution
    • D.J. Patel, S.A. Kozlowski, L.A. Marky, J.A. Rice, C. Broka, J. Dallas, K. Itakura, and K.J. Breslauer Structure, dynamics, and energetics of deoxyguanosine-thymidine wobble base pair formation in the self-complementary d(CGTGAATTCGCG) duplex in solution Biochemistry 21 1982 437 444
    • (1982) Biochemistry , vol.21 , pp. 437-444
    • Patel, D.J.1    Kozlowski, S.A.2    Marky, L.A.3    Rice, J.A.4    Broka, C.5    Dallas, J.6    Itakura, K.7    Breslauer, K.J.8
  • 13
    • 73049175291 scopus 로고
    • Hyperchromicity and strand separation in bacterial DNA
    • D. Freifelder, and P.F. Davison Hyperchromicity and strand separation in bacterial DNA Biophys. J. 2 1962 249 256
    • (1962) Biophys. J. , vol.2 , pp. 249-256
    • Freifelder, D.1    Davison, P.F.2
  • 14
    • 0025753988 scopus 로고
    • DNA hairpin loops in solution. Correlation between primary structure, thermostability and reactivity with single-strand-specific nuclease from mung bean
    • L.E. Xodo, G. Manzini, F. Quadrifoglio, G. van der Marel, and J. van Boom DNA hairpin loops in solution. Correlation between primary structure, thermostability and reactivity with single-strand-specific nuclease from mung bean Nucleic Acids Res. 19 1991 1505 1511 (Pubitemid 21913244)
    • (1991) Nucleic Acids Research , vol.19 , Issue.7 , pp. 1505-1511
    • Xodo, L.E.1    Manzini, G.2    Quadrifoglio, F.3    Van Der Marel, G.4    Van Boom, J.5
  • 15
    • 84858447791 scopus 로고    scopus 로고
    • http://www.cstl.nist.gov/strbase/str-SE33.htm.
  • 16
    • 0027421165 scopus 로고
    • Sequence variability of the tetranucleotide repeat of the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2) locus
    • DOI 10.1007/BF00420957
    • A. Urquhart, C.P. Kimpton, and P. Gill Sequence variability of the tetranucleotide repeat of the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2) locus Hum. Genet. 92 1993 637 638 (Pubitemid 23356831)
    • (1993) Human Genetics , vol.92 , Issue.6 , pp. 637-638
    • Urquhart, A.1    Kimpton, C.P.2    Gill, P.3
  • 17
    • 0020995483 scopus 로고
    • Structure of two human beta-actin-related processed genes one of which is located next to a simple repetitive sequence
    • M. Moos, and D. Gallwitz Structure of two human beta-actin-related processed genes one of which is located next to a simple repetitive sequence EMBO J. 2 1983 757 761
    • (1983) EMBO J. , vol.2 , pp. 757-761
    • Moos, M.1    Gallwitz, D.2
  • 18
    • 0345060297 scopus 로고    scopus 로고
    • Assembly of 48S Translation Initiation Complexes from Purified Components with mRNAs that Have Some Base Pairing within Their 5′ Untranslated Regions
    • DOI 10.1128/MCB.23.24.8925-8933.2003
    • S.E. Dmitriev, I.M. Terenin, Y.E. Dunaevsky, W.C. Merrick, and I.N. Shatsky Assembly of 48S translation initiation complexes from purified components with mRNAs that have some base pairing within their 5′ untranslated regions Mol. Cell. Biol. 23 2003 8925 8933 (Pubitemid 37499783)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.24 , pp. 8925-8933
    • Dmitriev, S.E.1    Terenin, I.M.2    Dunaevsky, Y.E.3    Merrick, W.C.4    Shatsky, I.N.5
  • 19
    • 0037332588 scopus 로고    scopus 로고
    • Role of the 5′-proximal stem-loop structure of the 5′ untranslated region in replication and translation of hepatitis C virus RNA
    • DOI 10.1128/JVI.77.5.3312-3318.2003
    • G. Luo, S. Xin, and Z. Cai Role of the 5′-proximal stem-loop structure of the 5′ untranslated region in replication and translation of hepatitis C virus RNA J. Virol. 77 2003 3312 3318 (Pubitemid 36228116)
    • (2003) Journal of Virology , vol.77 , Issue.5 , pp. 3312-3318
    • Luo, G.1    Xin, S.2    Cai, Z.3
  • 20
    • 0035104746 scopus 로고    scopus 로고
    • Temperature and pH studies of short tandem repeat systems using capillary electrophoresis at elevated pH
    • DOI 10.1002/1522-2683(200102)22:4<755::AID-ELPS755>3.0.CO;2-S
    • T. Nock, J. Dove, B. McCord, and D. Mao Temperature and pH studies of short tandem repeat systems using capillary electrophoresis at elevated pH Electrophoresis 22 2001 755 762 (Pubitemid 32208433)
    • (2001) Electrophoresis , vol.22 , Issue.4 , pp. 755-762
    • Nock, T.1    Dove, J.2    McCord, B.3    Mao, D.4
  • 21
    • 0027251680 scopus 로고
    • Contribution of secondary structure to DNA mobility in capillary gels
    • K.D. Konrad, and S.L. Pentoney Contribution of secondary structure to DNA mobility in capillary gels Electrophoresis 14 1993 502 508 (Pubitemid 23185066)
    • (1993) Electrophoresis , vol.14 , Issue.5-6 , pp. 502-508
    • Konrad, K.D.1    Pentoney Jr., S.L.2
  • 22
    • 0038779276 scopus 로고    scopus 로고
    • Response of short tandem repeat systems to temperature and sizing methods
    • DOI 10.1016/S0379-0738(03)00074-4
    • B. Hartzell, K. Graham, and B. McCord Response of short tandem repeat systems to temperature and sizing methods Forensic Sci. Int. 133 2003 228 234 (Pubitemid 36638300)
    • (2003) Forensic Science International , vol.133 , Issue.3 , pp. 228-234
    • Hartzell, B.1    Graham, K.2    McCord, B.3
  • 23
    • 11144279421 scopus 로고    scopus 로고
    • Allelic drop-out in the STR system ACTBP2 (SE33) as a result of mutations in the primer binding region
    • DOI 10.1007/s00414-004-0473-0
    • M. Heinrich, M. Muller, S. Rand, B. Brinkman, and C. Hohoff Allelic drop-out in the STR system ACTBP2 (SE33) as a result of mutations in the primer binding region Int. J. Legal Med. 118 2004 361 363 (Pubitemid 40022263)
    • (2004) International Journal of Legal Medicine , vol.118 , Issue.6 , pp. 361-363
    • Heinrich, M.1    Muller, M.2    Rand, S.3    Brinkmann, B.4    Hohoff, C.5
  • 24
    • 79957632749 scopus 로고    scopus 로고
    • STR sequence analysis for characterizing normal, variant, and null alleles
    • M.C. Kline, C.R. Hill, A.E. Decker, and J.M. Butler STR sequence analysis for characterizing normal, variant, and null alleles Forensic Sci. Int. Genet. 5 2011 329 332
    • (2011) Forensic Sci. Int. Genet. , vol.5 , pp. 329-332
    • Kline, M.C.1    Hill, C.R.2    Decker, A.E.3    Butler, J.M.4
  • 25
    • 79957641508 scopus 로고    scopus 로고
    • Insertion-/deletion polymorphisms close to the repeat region of STR loci can cause discordant genotypes with different STR kits
    • B. Rolf, N. Bulander, and P. Wiegand Insertion-/deletion polymorphisms close to the repeat region of STR loci can cause discordant genotypes with different STR kits Forensic Sci. Int. Genet. 5 2011 339 341
    • (2011) Forensic Sci. Int. Genet. , vol.5 , pp. 339-341
    • Rolf, B.1    Bulander, N.2    Wiegand, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.