Response of short tandem repeat systems to temperature and sizing methods

Forensic Science International

Volumn 133, Issue 3, 2003, Pages 228-234

  Hartzell, Brittany ^a   Graham, Kylie ^a   McCord, Bruce ^a  

^a 136 Clippinger Laboratories   (United States)

Author keywords

DNA; Sizing; STR; Temperature

Indexed keywords

BUFFER; DNA; DNA FRAGMENT; FLUORESCENT DYE; HYDROXYETHYLCELLULOSE;

ACCURACY; ALKALINITY; ALLELE; ALLELISM; ARTICLE; DNA FINGERPRINTING; DNA STRUCTURE; DNA TRANSFER; FLUORESCENCE ANALYSIS; GEL ELECTROPHORESIS; GENE AMPLIFICATION; GENETIC ANALYSIS; INTERMETHOD COMPARISON; PRIORITY JOURNAL; SOUTHERN BLOTTING; TANDEM REPEAT; TECHNIQUE; TEMPERATURE DEPENDENCE; TEMPERATURE SENSITIVITY;

EID: 0038779276     PISSN: 03790738     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0379-0738(03)00074-4     Document Type: Article

References (13)

1. J.M. Butler, Forensic DNA Typing: Biology and Technology Behind STR Markers, Academic Press, San Diego, CA, USA, 2001.
2. Tagliabracci A., Buscemi L., Sassaroli C., Paoli M., Rodriguez D. Allele typing of short tandem repeats by capillary electrophoresis. Int. J. Leg. Med. 113:1999;26-32.
3. Buscemi L., Tagliabracci A., Sassaroli C., Bianchi F., Canestrari S., Rodriguez D. Polymerase chain reaction typing of D21S11 short tandem repeat polymorphism by capillary electrophoresis: allele frequencies and sequencing data in a population sample from central Italy. Forensic Sci. Int. 92:1998;251-258.
4. Pawlowski R., Branicki W., Kupiec T. Y-chromosomal polymorphic loci DYS19, DYS390, DYS393 in a population sample from northern Poland. Electrophoresis. 20:1999;1702-1706.
5. Corach D., Risso L.F., Marino M., Penacino G., Sala A. Routine Y-STR typing in forensic casework. Forensic Sci. Int. 118:2001;131-135.
6. Holt C., Stauffer C., Wallin J.M., Lazaruk K.D., Nguyen T., Budowle B., Walsh P.S. Practical applications of genotypic surveys for forensic STR testing. Forensic Sci. Int. 112:2000;91-109.
7. Isenberg A.R., Allen R.O., Keys K.M., Smerick J.B., Budowle B., McCord B.R. Analysis of two multiplexed short tandem repeat systems using capillary electrophoresis with multi-wavelength fluorescence detection. Electrophoresis. 19:1998;94-100.
8. Nock T., Dove J., McCord B., Mao D. Temperature and pH studies of short tandem repeat systems using capillary electrophoresis at elevated pH. Electrophoresis. 22:2001;755-762.
9. Rosenblum B.B., Oaks F., Menchen S., Johnson B. Improved single-strand DNA sizing accuracy in capillary electrophoresis. Nucl. Acids Res. 25:1997;3925-3929.
10. Elder J.K., Southern E.M. Measurement of DNA length by gel electrophoresis. Part II: Comparison of methods for relating mobility to fragment length. Anal. Biochem. 128:1983;227-231.
11. de Knijff P., Kayser M., Cagliá A., Corach D., Fretwell N., Gehrig C., Graziosi G., Heidorn F., Herrmann S., Herzog B.et al. Reference tables to chromosome Y microsatellites: population genetic and evolutionary aspects. Int. J. Legal Med. 110:1997;141-149.
12. Füredi S., Woller J., Pádár Z., Angyal M. Y-STR haplotyping in two Hungarian populations. Int. J. Legal Med. 13:1999;38-42.
13. S.B. Klein, J.M. Wallin, M.R. Buoncristiani, Addressing ambient temperature variation effects on sizing precision of AmpFISTR Profiler Plus alleles detected on the ABI Prism 310 Genetic Analyzer, Forensic Sci. Comm. 5 (2003).