Marker-free targeted transformation

Molecular Techniques in Crop Improvement: 2nd Edition

Volumn , Issue , 2009, Pages 527-543

  Ebinuma, Hiroyasu ^a   Nanto, Kazuya ^a  

^a NIPPON PAPER INDUSTRIES CO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84858430285     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-2967-6_22     Document Type: Chapter

References (43)

1. Albert H, Dale E-C, Lee E et al. (1995) Site-specific integration of DNA into wild-type and mutant lox sites placed in the plant genome. Plant J 7:649-659
2. Birch R-G (1997) Plant transformation: problems and strategies for practical application. Annu Rev Plant Physiol Plant Mol Biol 48:297-326
3. Chawla C, Ariza-Nieto M, Wilson A-J et al. (2006) Transgene expression produced by biolisticmediated site-specific gene integration is consistently inherited by the subsequent generations. Plant Biotechnol J 4:209-218
4. Chilton M-D, Que Q (2003) Targeted integration of T-DNA into the tobacco genome at double-strand breaks: new insights on the mechanism of T-DNA integration. Plant Physiol 133:956-965
5. Choi S, Begum D, Koshinsky H et al. (2000) A new approach for the identification and cloning of genes: the pBACwich system using Cre/lox site-specific recombination. Nucleic Acids Res 28:E19-E26
6. Day C-D, Lee E, Kobayashi J et al. (2000) Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced. Genes Dev 14:2869-2880
7. De Buck S, Windels P, De Loose M et al. (2004) Single-copy T-DNAs integrated at different positions in the Arabidopsis genome display uniform and comparable B-glucuronidase accumulation levels. CMLS Cell Mol Life Sci 61:2632-2645
8. De Wilde C, Podevin N, Windels P et al. (2001) Silencing of antibody genes in plants with singlecopy transgene inserts as a result of gene dosage effects. Mol Genet Genom 265:647-653
9. Ebinuma H, Nanto K (2007) Marker-free transgenic plants with a site-specific integrated copy produced by recombinase-mediated cassette exchange (RMCE). International Conference - Plant Tansformation Technologies (Abstract: pp 41). Vienna, Austria
10. Ebinuma H, Sugita K, Matsunaga E et al. (1997) Selection of marker-free transgenic plants using the isopentenyl transferase gene. Proc Natl Acad Sci U S A 94:2117-2121
11. Ebinuma H, Sugita K, Matsunaga E et al. (2001) Systems for the removal of a selection marker and their combination with a positive marker. Plant Cell Rep 20:383-392
12. Ebinuma H, Sugita K, Matsunaga E et al. (2004) Asexual production of marker-free transgenic aspen using MAT vector systems. In: Kumar S, Fladung M (eds) Molecular genetics and breeding of forest trees. Food Products, New York, pp 309-338
13. Ebinuma H, Sugita K, Endo S et al. (2005) Elimination of marker genes from transgenic plants using MAT vector systems. In: Pena L (ed) Transgenic plants. Humana, New Jersey, pp 237-253
14. Eszterhas S-K, Bouhassira E-E, Martin D-I et al. (2002) Transcriptional interference by independently regulated genes occurs in any relative arrangement of the genes and is influenced by chromosomal integration position. Mol Cell Biol 22(2):469-479
15. Feng Y-Q, Seibler J, Alami R et al. (1999) Site-specific chromosomal integration in mammalian cells: highly efficient Cre recombinase-mediated cassette exchange. J Mol Biol 292:779-785
16. Fukushige S, Sauer B (1992) Genomic targeting with a positive-selection lox integration vector allows highly reproducible gene expression in mammalian cells. Proc Natl Acad Sci U S A 89:7905-7909
17. Feng Y-Q, Lorincz M-C, Fiering S et al. (2001) Position effects are influenced by the orientation of a transgene with respect to flanking chromatin. Mol Cell Biol 21(1):298-309
18. Kim S-I, Veena, Gelvin S-B (2007) Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under nonselective conditions. Plant J 51:779-791
19. Kumar S, Fladung M (2001) Gene stability in transgenic aspen (Populus). II. Molecular characterization of variable expression of transgene in wild and hybrid aspen. Planta 213:731-740
20. Kohli A, Twyman R-M, Abranches W et al. (2003) Transgene integration, organization and interaction in plants. Plant Mol Biol 52:247-258
21. Louwerse J-D, Van Lier M-C-M, Van Der Steen et al. (2007) Stable recombinase-mediated cassette exchange in Arabidopsis using Agrobacterium tumefaciens. Plant Physiol 145:1282-1293
22. Lyznik L-A, Gordon-Kamm W-J, Tao Y (2003) Site-specific recombination for genetic engineering in plants. Plant Cell Rep 21:925-932
23. Maqbool S-B, Christou P (1999) Multiple traits of agronomic importance in transgenic indica rice plants analysis of transgene integration patterns, expression levels and stability. Mol Breed 5:471-480
24. Matsuzaki H, Nakajima R, Nishiyama J et al. (1990) Chromosome engineering in Saccharomyces cerevisiae by using a site-specific recombination system of a yeast plasmid. J Bact 172:610-618
25. Matzke M-A, Matzke A-J-M (1991) Differential inactivation and methylation of a transgene in plants by two suppressor loci containing homologous sequences. Plant Mol Biol 16:821-830
26. Matzke M-A, Mette M-F (2000) Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanism in plants and vertebrates. Plant Mol Biol 43:401-415
27. Meyer P (2000) Transcriptional transgene silencing and chromatin component. Plant Mol Biol 43:221-234
28. Nanto K, Ebinuma H (2007) Expression of a transgene exchanged by the recombinase-mediated cassette exchange (RMCE) method in plants. International Conference - Plant Tansformation Technologies (Abstract: pp 71) Vienna, Austria
29. Nanto K, Ebinuma H (2008, on line: 2007) Marker-free site-specific integration plants. Transgenic Res 17:337-344
30. Nanto K, Yamada-Watanabe K, Ebinuma H (2005) Agrobacterium-mediated RMCE approach for gene replacement. Plant Biotechnol J 3:203-214
31. Nanto K, Sato K, Katayama Y, Ebinuma H (2009) Expression of a transgene exchanged by the recombinase-mediated cassette exchange (RMCE) method in plants. Plant Cell Rep 28:777-785
32. O'Gorman S, Fox D-T, Wahl G-M (1991) Recombinase-mediated gene activation and site-specific integration in mammalian cells. Science 251:1351-1355
33. Onouchi H, Yokoi K, Machida C et al. (1991) Operation of an efficient site-specific recombination system of Zygosaccharomyces rouxii in tobacco cells. Nucleic Acids Res 19:6373-6378
34. Ow D-W (2002) Recombinase-directed plant transformation for the post-genomic era. Plant Mol Biol 48:183-200
35. Schlaman H-R-M, Hooykaas P-J-J (1997) Effectiveness of the bacterial gene codA encoding cytosine deaminase as a negative selectable marker in Agrobacterium-mediated plant transformation. Plant J 11:1377-1385
36. Srivastava V, Ow D-W (2001) Biolistic mediated site-specific integration in rice. Mol Breed 8:345-350
37. Srivastava V, Ow D-W (2004) Marker-free site-specific gene integration in plants. Trends Biotech 22:627-629
38. Srivastava V, Ariza-Nieto M, Wilson A-J (2004) Cre-mediated site-specific gene integration for consistent transgene expression in rice. Plant Biotechnol J 2(2):169-179
39. Sugita K, Matsunaga E, Ebinuma H (1999) Effective selection system for generating marker-free transgenic plants independent of sexual crossing. Plant Cell Rep 18:941-947
40. Tzfira T, Frankman L-R, Vaidya M et al. (2003) Site-specific integration of Agrobacterium tumefaciens T-DNA via doublestranded intermediates. Plant Physiol 133:1011-1023
41. Vain P, James V-A, Worland B et al. (2002) Transgene behaviour across two generations in a large random population of transgenic rice plants produced by particle bombardment. Theor Appl Genet 105:878-889
42. Vergunst A-C, Hooykaas P-J (1998) Cre/lox-mediated site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana by transient expression of cre. Plant Mol Biol 38:393-406
43. Vergunst A-C, Jansen L-E, Hooykaas P-J (1998) Site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana mediated by Cre recombinase. Nucleic Acids Res 26:2729-2734