-
1
-
-
70350225445
-
Bacterial communities in a crude oil gathering and transferring system (China)
-
Liu Y. J., Chen Y. P., Jin P. K., Wang X. C., Bacterial communities in a crude oil gathering and transferring system (China) Anaerobe 2009 15 5 214 218
-
(2009)
Anaerobe
, vol.15
, Issue.5
, pp. 214-218
-
-
Liu, Y.J.1
Chen, Y.P.2
Jin, P.K.3
Wang, X.C.4
-
2
-
-
0034064785
-
Microbiology of petroleum reservoirs
-
DOI 10.1023/A:1002434330514
-
Magot M., Ollivier B., Patel B. K. C., Microbiology of petroleum reservoirs Antonie van Leeuwenhoek 2000 77 2 103 116 (Pubitemid 30160411)
-
(2000)
Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
, vol.77
, Issue.2
, pp. 103-116
-
-
Magot, M.1
Ollivier, B.2
Patel, B.K.C.3
-
4
-
-
4644280496
-
Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs
-
DOI 10.1038/nature02922
-
Aitken C. M., Jones D. M., Larter S. R., Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs Nature 2004 431 7006 291 294 (Pubitemid 39265660)
-
(2004)
Nature
, vol.431
, Issue.7006
, pp. 291-294
-
-
Aitken, C.M.1
Jones, D.M.2
Larter, S.R.3
-
5
-
-
36049040735
-
Monitoring bioremediation
-
Atlas R. M. Philp J. C. Washington, DC, USA ASM Press
-
Philp J. C., Whiteley A. S., Ciric L., Bailey M. J., Atlas R. M., Philp J. C., Monitoring bioremediation Bioremediation: Applied Microbial Solutions for Real-World Environmental Cleanup 2005 Washington, DC, USA ASM Press 237 268
-
(2005)
Bioremediation: Applied Microbial Solutions for Real-World Environmental Cleanup
, pp. 237-268
-
-
Philp, J.C.1
Whiteley, A.S.2
Ciric, L.3
Bailey, M.J.4
-
6
-
-
54349125695
-
Bacterial diversity characterization in petroleum samples from Brazilian reservoirs
-
Oliveira V. M., Sette L. D., Simioni K. C. M., dos Santos Neto E. V., Bacterial diversity characterization in petroleum samples from Brazilian reservoirs Brazilian Journal of Microbiology 2008 39 3 445 452
-
(2008)
Brazilian Journal of Microbiology
, vol.39
, Issue.3
, pp. 445-452
-
-
Oliveira, V.M.1
Sette, L.D.2
Simioni, K.C.M.3
Dos Santos Neto, E.V.4
-
7
-
-
43749116504
-
Molecular diversity of bacterial communities from subseafloor rock samples in a deep-water production basin in Brazil
-
von der Weid I., Korenblum E., Jurelevicius D., Rosado A. S., Dino R., Sebastin G. V., Seldin L., Molecular diversity of bacterial communities from subseafloor rock samples in a deep-water production basin in Brazil Journal of Microbiology and Biotechnology 2008 18 1 5 14
-
(2008)
Journal of Microbiology and Biotechnology
, vol.18
, Issue.1
, pp. 5-14
-
-
Von Der Weid, I.1
Korenblum, E.2
Jurelevicius, D.3
Rosado, A.S.4
Dino, R.5
Sebastin, G.V.6
Seldin, L.7
-
8
-
-
74149093053
-
Bacterial diversity in water injection systems of Brazilian offshore oil platforms
-
Korenblum E., Valoni., Penna M., Seldin L., Bacterial diversity in water injection systems of Brazilian offshore oil platforms Applied Microbiology and Biotechnology 2010 85 3 791 800
-
(2010)
Applied Microbiology and Biotechnology
, vol.85
, Issue.3
, pp. 791-800
-
-
Korenblum, E.1
Valoni, .2
Penna, M.3
Seldin, L.4
-
9
-
-
0021729228
-
Biodegradation of crude oils in reservoirs
-
Brooks J. Welte D. H. London, UK Academic Press
-
Connan J., Brooks J., Welte D. H., Biodegradation of crude oils in reservoirs Advances in Petroleum Geochemistry 1984 1 London, UK Academic Press 299 335
-
(1984)
Advances in Petroleum Geochemistry
, vol.1
, pp. 299-335
-
-
Connan, J.1
-
10
-
-
0011608928
-
Oil field microbiology
-
Hurst C. Crawford R. L. Knudsen G. R. McInerney M. J. Stetzenbach L. D. Washington, DC, USA ASM Press
-
McInerney M. J., Sublette K. L., Hurst C., Crawford R. L., Knudsen G. R., McInerney M. J., Stetzenbach L. D., Oil field microbiology Manual of Environmental Microbiology 2002 Washington, DC, USA ASM Press 777 787
-
(2002)
Manual of Environmental Microbiology
, pp. 777-787
-
-
McInerney, M.J.1
Sublette, K.L.2
-
11
-
-
37449002019
-
Microbial community structure analysis of produced water from a high-temperature North Sea oil-field
-
Dahle H., Garshol F., Madsen M., Birkeland N., Microbial community structure analysis of produced water from a high-temperature North Sea oil-field Antonie van Leeuwenhoek 2008 93 1-2 37 49
-
(2008)
Antonie Van Leeuwenhoek
, vol.93
, Issue.12
, pp. 37-49
-
-
Dahle, H.1
Garshol, F.2
Madsen, M.3
Birkeland, N.4
-
12
-
-
0021928234
-
Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains
-
Seldin L., Dubnau D., DNA homology among Bacillus polymyxa, Bacillus azotofixans and other nitrogen fixing Bacillus strains International Journal of Systematic Bacteriology 1985 35 2 151 154 (Pubitemid 15101594)
-
(1985)
International Journal of Systematic Bacteriology
, vol.35
, Issue.2
, pp. 151-154
-
-
Seldin, L.1
Dubnau, D.2
-
13
-
-
0002912874
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) for studying soil microbial communities
-
van Elsas J. D. Trevors J. T. Wellington E. M. H. New York, NY, USA Marcel Dekker
-
Heuer H., Smalla K., van Elsas J. D., Trevors J. T., Wellington E. M. H., Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) for studying soil microbial communities Modern Soil Microbiology 1997 New York, NY, USA Marcel Dekker 353 370
-
(1997)
Modern Soil Microbiology
, pp. 353-370
-
-
Heuer, H.1
Smalla, K.2
-
14
-
-
5044240973
-
Bellerophon: A program to detect chimeric sequences in multiple sequence alignments
-
DOI 10.1093/bioinformatics/bth226
-
Huber T., Faulkner G., Hugenholtz P., Bellerophon: a program to detect chimeric sequences in multiple sequence alignments Bioinformatics 2004 20 14 2317 2319 (Pubitemid 39341624)
-
(2004)
Bioinformatics
, vol.20
, Issue.14
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
15
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
DOI 10.1128/AEM.00062-07
-
Wang Q., Garrity G. M., Tiedje J. M., Cole J. R., Nave Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy Applied and Environmental Microbiology 2007 73 16 5261 5267 (Pubitemid 47326658)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.16
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
16
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul S. F., Madden T. L., Schffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Research 1997 25 17 3389 3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
17
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss P. D., Westcott S. L., Ryabin T., Hall J. R., Hartmann M., Hollister E. B., Lesniewski R. A., Oakley B. B., Parks D. H., Robinson C. J., Sahl J. W., Stres B., Thallinger G. G., Van Horn D. J., Weber C. F., Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities Applied and Environmental Microbiology 2009 75 23 7537 7541
-
(2009)
Applied and Environmental Microbiology
, vol.75
, Issue.23
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
Van Horn, D.J.14
Weber, C.F.15
-
18
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G., The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Research 1997 25 24 4876 4882 (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
19
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S., MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods Molecular Biology and Evolution 2011 28 10 2731 2739
-
(2011)
Molecular Biology and Evolution
, vol.28
, Issue.10
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
21
-
-
0035463837
-
Quantitative Comparisons of 16S rRNA Gene Sequence Libraries from Environmental Samples
-
DOI 10.1128/AEM.67.9.4374-4376.2001
-
Singleton D. R., Furlong M. A., Rathbun S. L., Whitman W. B., Quantitative comparisons of 16S rDNA sequence libraries from environmental samples Applied and Environmental Microbiology 2001 67 9 4374 4376 (Pubitemid 33641744)
-
(2001)
Applied and Environmental Microbiology
, vol.67
, Issue.9
, pp. 4374-4376
-
-
Singleton, D.R.1
Furlong, M.A.2
Rathbun, S.L.3
Whitman, W.B.4
-
22
-
-
0037180794
-
SAR11 clade dominates ocean surface bacterioplankton communities
-
DOI 10.1038/nature01240
-
Morris R. M., Rappé M. S., Connon S. A., Vergin K. L., Siebold W. A., Carlson C. A., Giovannoni S. J., SAR11 clade dominates ocean surface bacterioplankton communities Nature 2002 420 6917 806 810 (Pubitemid 36019626)
-
(2002)
Nature
, vol.420
, Issue.6917
, pp. 806-810
-
-
Morris, R.M.1
Rappe, M.S.2
Connon, S.A.3
Vergin, K.L.4
Siebold, W.A.5
Carlson, C.A.6
Giovannoni, S.J.7
-
23
-
-
65849465970
-
Methods for recovery of microorganisms and intact microbial polar lipids from oil-water mixtures: Laboratory experiments and natural well-head fluids
-
Oldenburg T. B. P., Larter S. R., Adams J. J., Clements M., Hubert C., Rowan A. K., Brown A., Head I. M., Grigoriyan A. A., Voordouw G., Fustic M., Methods for recovery of microorganisms and intact microbial polar lipids from oil-water mixtures: laboratory experiments and natural well-head fluids Analytical Chemistry 2009 81 10 4130 4136
-
(2009)
Analytical Chemistry
, vol.81
, Issue.10
, pp. 4130-4136
-
-
Oldenburg, T.B.P.1
Larter, S.R.2
Adams, J.J.3
Clements, M.4
Hubert, C.5
Rowan, A.K.6
Brown, A.7
Head, I.M.8
Grigoriyan, A.A.9
Voordouw, G.10
Fustic, M.11
-
24
-
-
78149487331
-
First investigation of the microbiology of the deepest layer of ocean crust
-
Mason O. U., Nakagawa T., Rosner M., van Nostrand J. D., Zhou J., Maruyama A., Fisk M. R., Giovannoni S. J., First investigation of the microbiology of the deepest layer of ocean crust PLoS One 2010 5 11
-
(2010)
PLoS One
, vol.5
, Issue.11
-
-
Mason, O.U.1
Nakagawa, T.2
Rosner, M.3
Van Nostrand, J.D.4
Zhou, J.5
Maruyama, A.6
Fisk, M.R.7
Giovannoni, S.J.8
-
25
-
-
0033952662
-
Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs
-
DOI 10.1128/AEM.66.2.700-711.2000
-
Orphan V. J., Taylor L. T., Hafenbradl D., Delong E. F., Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs Applied and Environmental Microbiology 2000 66 2 700 711 (Pubitemid 30082762)
-
(2000)
Applied and Environmental Microbiology
, vol.66
, Issue.2
, pp. 700-711
-
-
Orphan, V.J.1
Taylor, L.T.2
Hafenbradl, D.3
Delong, E.F.4
-
26
-
-
1242338003
-
Influence of petroleum contamination and biostimulation treatment on the diversity of Pseudomonas spp. in soil microcosms as evaluated by 16S rRNA based-PCR and DGGE
-
DOI 10.1111/j.1472-765X.2003.01455.x
-
Evans F. F., Seldin L., Sebastian G. V., Kjelleberg S., Holmstrm C., Rosado A. S., Influence of petroleum contamination and biostimulation treatment on the diversity of Pseudomonas spp. in soil microcosms as evaluated by 16S rRNA based-PCR and DGGE Letters in Applied Microbiology 2004 38 2 93 98 (Pubitemid 38230612)
-
(2004)
Letters in Applied Microbiology
, vol.38
, Issue.2
, pp. 93-98
-
-
Evans, F.F.1
Seldin, L.2
Sebastian, G.V.3
Kjelleberg, S.4
Holmstrom, C.5
Rosado, A.S.6
-
27
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
DOI 10.1046/j.1462-2920.2002.00366.x
-
Nelson K. E., Weinel C., Paulsen I. T., Dodson R. J., Hilbert H., Martins dos Santos V. A. P., Fouts D. E., Gill S. R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R. T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J., Timmis K. N., Dsterhft A., Tmmler B., Fraser C. M., Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 Environmental Microbiology 2002 4 12 799 808 (Pubitemid 36064171)
-
(2002)
Environmental Microbiology
, vol.4
, Issue.12
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins Dos Santos, V.A.P.6
Fouts, D.E.7
Gill, S.R.8
Pop, M.9
Holmes, M.10
Brinkac, L.11
Beanan, M.12
DeBoy, R.T.13
Daugherty, S.14
Kolonay, J.15
Madupu, R.16
Nelson, W.17
White, O.18
Peterson, J.19
Khouri, H.20
Hance, I.21
Chris Lee, P.22
Holtzapple, E.23
Scanlan, D.24
Tran, K.25
Moazzez, A.26
Utterback, T.27
Rizzo, M.28
Lee, K.29
Kosack, D.30
Moestl, D.31
Wedler, H.32
Lauber, J.33
Stjepandic, D.34
Hoheisel, J.35
Straetz, M.36
Heim, S.37
Kiewitz, C.38
Eisen, J.39
Timmis, K.N.40
Dusterhoft, A.41
Tummler, B.42
Fraser, C.M.43
more..
-
28
-
-
0033975110
-
Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions
-
DOI 10.1128/AEM.66.2.493-498.2000
-
Chayabutra C., Ju L. K., Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions Applied and Environmental Microbiology 2000 66 2 493 498 (Pubitemid 30082732)
-
(2000)
Applied and Environmental Microbiology
, vol.66
, Issue.2
, pp. 493-498
-
-
Chayabutra, C.1
Ju, L.-K.2
-
29
-
-
0344896852
-
Marinobacter excellens sp. nov., isolated from sediments of the Sea of Japan
-
DOI 10.1099/ijs.0.02693-0
-
Gorshkova N. M., Ivanova E. P., Sergeev A. F., Zhukova N. V., Alexeeva Y., Wright J. P., Nicolau D. V., Mikhailov V. V., Christen R., Marinobacter excellens sp. nov., isolated from sediments of the Sea of Japan International Journal of Systematic and Evolutionary Microbiology 2003 53 6 2073 2078 (Pubitemid 37483876)
-
(2003)
International Journal of Systematic and Evolutionary Microbiology
, vol.53
, Issue.6
, pp. 2073-2078
-
-
Gorshkova, N.M.1
Ivanova, E.P.2
Sergeev, A.F.3
Zhukova, N.V.4
Alexeeva, Y.5
Wright, J.P.6
Nicolau, D.V.7
Mikhailov, V.V.8
Christen, R.9
-
30
-
-
77249143341
-
A salt tolerant Enterobacter cloacae mutant for bioaugmentation of petroleum- and salt-contaminated soil
-
Hua X., Wang J., Wu Z., Zhang H., Li H., Xing X., Liu Z., A salt tolerant Enterobacter cloacae mutant for bioaugmentation of petroleum- and salt-contaminated soil Biochemical Engineering Journal 2010 49 2 201 206
-
(2010)
Biochemical Engineering Journal
, vol.49
, Issue.2
, pp. 201-206
-
-
Hua, X.1
Wang, J.2
Wu, Z.3
Zhang, H.4
Li, H.5
Xing, X.6
Liu, Z.7
-
31
-
-
67650447439
-
Quantitative detection of the oil-degrading bacterium Acinetobacter sp. strain MUB1 by hybridization probe based real-time PCR
-
Phrommanich S., Suanjit S., Upatham S., Grams S. V., Kruatrachue M., Pokethitiyook P., Korge G., Hofmann A., Quantitative detection of the oil-degrading bacterium Acinetobacter sp. strain MUB1 by hybridization probe based real-time PCR Microbiological Research 2009 164 4 486 492
-
(2009)
Microbiological Research
, vol.164
, Issue.4
, pp. 486-492
-
-
Phrommanich, S.1
Suanjit, S.2
Upatham, S.3
Grams, S.V.4
Kruatrachue, M.5
Pokethitiyook, P.6
Korge, G.7
Hofmann, A.8
-
32
-
-
67349274124
-
Identification of novel denitrifying bacteria Stenotrophomonas sp. ZZ15 and Oceanimonas sp. YC13 and application for removal of nitrate from industrial wastewater
-
Yu L., Liu Y., Wang G., Identification of novel denitrifying bacteria Stenotrophomonas sp. ZZ15 and Oceanimonas sp. YC13 and application for removal of nitrate from industrial wastewater Biodegradation 2009 20 3 391 400
-
(2009)
Biodegradation
, vol.20
, Issue.3
, pp. 391-400
-
-
Yu, L.1
Liu, Y.2
Wang, G.3
-
33
-
-
0141705429
-
Characterization of microbial communities in gas industry pipelines
-
DOI 10.1128/AEM.69.9.5354-5363.2003
-
Zhu X. Y., Lubeck J., Kilbane J. J., Characterization of microbial communities in gas industry pipelines Applied and Environmental Microbiology 2003 69 9 5354 5363 (Pubitemid 37150759)
-
(2003)
Applied and Environmental Microbiology
, vol.69
, Issue.9
, pp. 5354-5363
-
-
Zhu, X.Y.1
Lubeck, J.2
Kilbane II, J.J.3
-
34
-
-
33751504127
-
Oil biodegradation by Bacillus strains isolated from the rock of an oil reservoir located in a deep-water production basin in Brazil
-
DOI 10.1007/s00253-006-0531-2
-
Cunha C. D., Rosado A. S., Sebastin G. V., Seldin L., von der Weid I., Oil biodegradation by Bacillus strains isolated from the rock of an oil reservoir located in a deep-water production basin in Brazil Applied Microbiology and Biotechnology 2006 73 4 949 959 (Pubitemid 44833041)
-
(2006)
Applied Microbiology and Biotechnology
, vol.73
, Issue.4
, pp. 949-959
-
-
Da Cunha, C.D.1
Rosado, A.S.2
Sebastian, G.V.3
Seldin, L.4
Von Der Weid, I.5
|