메뉴 건너뛰기




Volumn 61, Issue 4, 2012, Pages 483-488

Detection and identification of bacteria in clinical samples by 16S rRNA gene sequencing: Comparison of two different approaches in clinical practice

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; RNA 16S;

EID: 84858142887     PISSN: 00222615     EISSN: None     Source Type: Journal    
DOI: 10.1099/jmm.0.030387-0     Document Type: Article
Times cited : (84)

References (17)
  • 1
    • 0242384034 scopus 로고    scopus 로고
    • Review and reanalysis of domain-specific 16S primers
    • Baker, G. C., Smith, J. J. & Cowan, D. A. (2003). Review and reanalysis of domain-specific 16S primers. J Microbiol Methods 55, 541-555.
    • (2003) J Microbiol Methods , vol.55 , pp. 541-555
    • Baker, G.C.1    Smith, J.J.2    Cowan, D.A.3
  • 2
    • 0035142399 scopus 로고    scopus 로고
    • Endocarditis due to rare and fastidious bacteria
    • Brouqui, P. & Raoult, D. (2001). Endocarditis due to rare and fastidious bacteria. Clin Microbiol Rev 14, 177-207.
    • (2001) Clin Microbiol Rev , vol.14 , pp. 177-207
    • Brouqui, P.1    Raoult, D.2
  • 3
    • 5644227319 scopus 로고    scopus 로고
    • Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
    • Clarridge, J. E., III (2004). Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev 17, 840-862.
    • (2004) Clin Microbiol Rev , vol.17 , pp. 840-862
    • Clarridge, I.I.I.J.E.1
  • 4
    • 0043030063 scopus 로고    scopus 로고
    • Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service
    • Harris, K. A. & Hartley, J. C. (2003). Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service. J Med Microbiol 52, 685-691.
    • (2003) J Med Microbiol , vol.52 , pp. 685-691
    • Harris, K.A.1    Hartley, J.C.2
  • 5
    • 0036702028 scopus 로고    scopus 로고
    • Unique case of Helicobacter sp. osteomyelitis in an immunocompetent child diagnosed by broad-range 16S PCR
    • Harris, K. A., Fidler, K. J., Hartley, J. C., Vogt, J., Klein, N. J., Monsell, F. & Novelli, V. M. (2002). Unique case of Helicobacter sp. osteomyelitis in an immunocompetent child diagnosed by broad-range 16S PCR. J Clin Microbiol 40, 3100-3103.
    • (2002) J Clin Microbiol , vol.40 , pp. 3100-3103
    • Harris, K.A.1    Fidler, K.J.2    Hartley, J.C.3    Vogt, J.4    Klein, N.J.5    Monsell, F.6    Novelli, V.M.7
  • 6
    • 33749446489 scopus 로고    scopus 로고
    • The bacteriology of pleural infection by genetic and standard methods and its mortality significance
    • Maskell, N. A., Batt, S., Hedley, E. L., Davies, C. W., Gillespie, S. H. & Davies, R. J. (2006). The bacteriology of pleural infection by genetic and standard methods and its mortality significance. Am J Respir Crit Care Med 174, 817-823.
    • (2006) Am J Respir Crit Care Med , vol.174 , pp. 817-823
    • Maskell, N.A.1    Batt, S.2    Hedley, E.L.3    Davies, C.W.4    Gillespie, S.H.5    Davies, R.J.6
  • 8
    • 0033591293 scopus 로고    scopus 로고
    • The search for unrecognized pathogens
    • Relman, D. A. (1999). The search for unrecognized pathogens. Science 284, 1308-1310.
    • (1999) Science , vol.284 , pp. 1308-1310
    • Relman, D.A.1
  • 9
    • 0026936688 scopus 로고
    • Identification of uncultured microorganisms: Expanding the spectrum of characterized microbial pathogens
    • Relman, D. A. & Falkow, S. (1992). Identification of uncultured microorganisms: expanding the spectrum of characterized microbial pathogens. Infect Agents Dis 1, 245-253.
    • (1992) Infect Agents Dis , vol.1 , pp. 245-253
    • Relman, D.A.1    Falkow, S.2
  • 10
    • 0027524771 scopus 로고
    • Evaluation of polymerase chain reaction for diagnosis of pneumococcal pneumonia
    • Rudolph, K. M., Parkinson, A. J., Black, C. M. & Mayer, L. W. (1993). Evaluation of polymerase chain reaction for diagnosis of pneumococcal pneumonia. J Clin Microbiol 31, 2661-2666.
    • (1993) J Clin Microbiol , vol.31 , pp. 2661-2666
    • Rudolph, K.M.1    Parkinson, A.J.2    Black, C.M.3    Mayer, L.W.4
  • 11
    • 40849111584 scopus 로고    scopus 로고
    • Evaluation of a protocol for molecular broad-range diagnosis of culture-negative bacterial infections in clinical routine diagnosis
    • Schabereiter-Gurtner, C., Nehr, M., Apfalter, P., Makristathis, A., Rotter, M. L. & Hirschl, A. M. (2008). Evaluation of a protocol for molecular broad-range diagnosis of culture-negative bacterial infections in clinical routine diagnosis. J Appl Microbiol 104, 1228-1237.
    • (2008) J Appl Microbiol , vol.104 , pp. 1228-1237
    • Schabereiter-Gurtner, C.1    Nehr, M.2    Apfalter, P.3    Makristathis, A.4    Rotter, M.L.5    Hirschl, A.M.6
  • 12
    • 1242336853 scopus 로고    scopus 로고
    • Prospective study of use of PCR amplification and sequencing of 16S ribosomal DNA from cerebrospinal fluid for diagnosis of bacterial meningitis in a clinical setting
    • Schuurman, T., de Boer, R. F., Kooistra-Smid, A. M. D. & van Zwet, A. A. (2004). Prospective study of use of PCR amplification and sequencing of 16S ribosomal DNA from cerebrospinal fluid for diagnosis of bacterial meningitis in a clinical setting. J Clin Microbiol 42, 734-740.
    • (2004) J Clin Microbiol , vol.42 , pp. 734-740
    • Schuurman, T.1    de Boer, R.F.2    Kooistra-Smid, A.M.D.3    van Zwet, A.A.4
  • 13
    • 34547841273 scopus 로고    scopus 로고
    • Comparison of broadrange bacterial PCR and culture of cerebrospinal fluid for diagnosis of community-acquired bacterial meningitis
    • Welinder-Olsson, C., Dotevall, L., Hogevik, H., Jungnelius, R., Trollfors, B., Wahl, M. & Larsson, P. (2007). Comparison of broadrange bacterial PCR and culture of cerebrospinal fluid for diagnosis of community-acquired bacterial meningitis. Clin Microbiol Infect 13, 879-886.
    • (2007) Clin Microbiol Infect , vol.13 , pp. 879-886
    • Welinder-Olsson, C.1    Dotevall, L.2    Hogevik, H.3    Jungnelius, R.4    Trollfors, B.5    Wahl, M.6    Larsson, P.7
  • 14
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. R. (1987). Bacterial evolution. Microbiol Rev 51, 221-271.
    • (1987) Microbiol Rev , vol.51 , pp. 221-271
    • Woese, C.R.1
  • 15
    • 0035097461 scopus 로고    scopus 로고
    • Identification by 16S ribosomal RNA gene sequencing of an Enterobacteriaceae species with ambiguous biochemical profile from a renal transplant recipient
    • Woo, P. C. Y., Cheung, E. Y. L., Leung, K. & Yuen, K. (2001). Identification by 16S ribosomal RNA gene sequencing of an Enterobacteriaceae species with ambiguous biochemical profile from a renal transplant recipient. Diagn Microbiol Infect Dis 39, 85-93.
    • (2001) Diagn Microbiol Infect Dis , vol.39 , pp. 85-93
    • Woo, P.C.Y.1    Cheung, E.Y.L.2    Leung, K.3    Yuen, K.4
  • 16
    • 2342503768 scopus 로고    scopus 로고
    • Employment of 16 S rDNA gene sequencing techniques to identify culturable environmental eubacteria in a tertiary referral hospital
    • Xu, J., Smyth, C. L., Buchanan, J. A., Dolan, A., Rooney, P. J., Millar, B. C., Goldsmith, C. E., Elborn, J. S. & Moore, J. E. (2004). Employment of 16 S rDNA gene sequencing techniques to identify culturable environmental eubacteria in a tertiary referral hospital. J Hosp Infect 57, 52-58.
    • (2004) J Hosp Infect , vol.57 , pp. 52-58
    • Xu, J.1    Smyth, C.L.2    Buchanan, J.A.3    Dolan, A.4    Rooney, P.J.5    Millar, B.C.6    Goldsmith, C.E.7    Elborn, J.S.8    Moore, J.E.9
  • 17
    • 33747186194 scopus 로고    scopus 로고
    • Real-time quantitative broad-range PCR assay for detection of the 16S rRNA gene followed by sequencing for species identification
    • Zucol, F., Ammann, R. A., Berger, C., Aebi, C., Altwegg, M., Niggli, F. K. & Nadal, D. (2006). Real-time quantitative broad-range PCR assay for detection of the 16S rRNA gene followed by sequencing for species identification. J Clin Microbiol 44, 2750-2759.
    • (2006) J Clin Microbiol , vol.44 , pp. 2750-2759
    • Zucol, F.1    Ammann, R.A.2    Berger, C.3    Aebi, C.4    Altwegg, M.5    Niggli, F.K.6    Nadal, D.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.