Short self-assembling peptides as building blocks for modern nanodevices

Trends in Biotechnology

Volumn 30, Issue 3, 2012, Pages 155-165

  Lakshmanan, Anupama ^a   Zhang, Shuguang ^a   Hauser, Charlotte A E ^a  

^a INSTITUTE OF BIOENGINEERING AND NANOTECHNOLOGY   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

BIONANOTECHNOLOGY; BIORECOGNITION ELEMENTS; BUILDING BLOCKES; FUNCTIONAL DEVICES; NANO-DEVICES; NANOPARTICLE ARRAY; ORGANIC TEMPLATES; PLASMONIC; RATIONAL DESIGN; SELF ASSEMBLED NANOSTRUCTURES; SELF-ASSEMBLING PEPTIDES; SEMICONDUCTING NANOWIRES; SUPRAMOLECULAR STRUCTURE;

CRYSTALLOGRAPHY; ELECTRIC FIELDS; NANOSTRUCTURED MATERIALS; NANOWIRES; PEPTIDES;

SELF ASSEMBLY;

AMPHOPHILE; AMYLOID; COPPER ION; DNA; FUNGAL PROTEIN; GLUCOSE OXIDASE; GOLD; GRAPHITE; HEXAPEPTIDE; LANTHANIDE; LEAD; NANOMATERIAL; NANOTUBE; NANOWIRE; PEPTIDE; PHENYLALANINE DERIVATIVE; QUANTUM DOT; SOLVENT; SUCCINIMIDE; SURFACTANT; VIRUS PROTEIN;

ADENOVIRUS; AQUEOUS SOLUTION; BIOCOMPATIBILITY; CHROMATOPHORE; CIRCULAR DICHROISM; CONJUGATE; CRYSTAL; ELECTRODE; ELECTROMAGNETIC FIELD; ENERGY TRANSFER; ENZYME BINDING; ENZYME IMMOBILIZATION; ENZYMIC BIOSENSOR; GENETIC PROCEDURES; HYDROGEL; HYDROGEN BOND; HYDROPHOBICITY; IONIC STRENGTH; LIGHT; LINEAR SYSTEM; MATERIAL COATING; MOLECULAR HYBRIDIZATION; MOLECULAR INTERACTION; MOLECULE; NANOBIOTECHNOLOGY; NANODEVICE; PH; PHOTOLUMINESCENCE; PHYSICAL CHEMISTRY; PRIORITY JOURNAL; PROCESS DEVELOPMENT; PROTEIN ASSEMBLY; PROTEIN CROSS LINKING; PROTEIN DOMAIN; PROTEIN MODIFICATION; REVIEW; SIGNAL TRANSDUCTION; STATIC ELECTRICITY; SURFACE CHARGE; TEMPERATURE; YEAST;

BIOTECHNOLOGY; NANOTECHNOLOGY; PEPTIDES; PROTEIN MULTIMERIZATION;

EID: 84858074134     PISSN: 01677799     EISSN: 18793096     Source Type: Journal    
DOI: 10.1016/j.tibtech.2011.11.001     Document Type: Review

References (85)

1. Gazit E. Self-assembly of short peptides for nanotechnological applications. Nanobiotechnology 2008, 385-395. Humana Press. O. Shoseyov, I. Levy (Eds.).
2. Chen C.-L., Rosi N.L. Peptide-based methods for the preparation of nanostructured inorganic materials. Angew. Chem. Int. Ed. 2010, 49:1924-1942.
3. Lehn J.M. Toward self-organization and complex matter. Science 2002, 295:2400-2403.
4. Scheibel T., et al. Conducting nanowires built by controlled self-assembly of amyloid fibers and selective metal deposition. Proc. Natl. Acad. Sci. U.S.A. 2003, 100:4527-4532.
5. Castillo J., et al. Manipulation of biological samples using micro and nano techniques. Integr. Biol. 2009, 1:30-42.
6. Chronis N., Lee L.P. Electrothermally activated SU-8 microgripper for single cell manipulation in solution. J. MEMS 2005, 14:857-863.
7. Cavalli S., et al. Amphiphilic peptides and their cross-disciplinary role as building blocks for nanoscience. Chem. Soc. Rev. 2010, 39:241-263.
8. Loo Y., et al. From short peptides to nanofibers to macromolecular assemblies in biomedicine. Biotechnol. Adv. 2011, 10.1016/j.biotechadv.2011.10.004.
9. Rajagopal K., Schneider J.P. Self-assembling peptides and proteins for nanotechnological applications. Curr. Opin. Struct. Biol. 2004, 14:480-486.
10. Hauser C.A.E., Zhang S. Designer self-assembling peptide nanofiber biological materials. Chem. Soc. Rev. 2010, 39:2780-2790.
11. Kokkoli E., et al. Self-assembly and applications of biomimetic and bioactive peptide-amphiphiles. Soft Matter 2006, 2:1015-1024.
12. Gazit E. Self-assembled peptide nanostructures: the design of molecular building blocks and their technological utilization. Chem. Soc. Rev. 2007, 36:1263-1269.
13. Adler-Abramovich L., et al. Self-assembled arrays of peptide nanotubes by vapour deposition. Nat. Nanotechnol. 2009, 4:849-854.
14. Reches M., Gazit E. Casting metal nanowires within discrete self-assembled peptide nanotubes. Science 2003, 300:625-627.
15. Wang M., et al. Charged diphenylalanine nanotubes and controlled hierarchical self-assembly. ACS Nano 2011, 5:4448-4454.
16. Zhu P., et al. Solvent-induced structural transition of self-assembled dipeptide: from organogels to microcrystals. Chemistry 2010, 16:3176-3183.
17. Ryu J., Park C.B. High-temperature self-assembly of peptides into vertically well-aligned nanowires by aniline vapor. Adv. Mater. 2008, 20:3754-3758.
18. Reches M., Gazit E. Controlled patterning of aligned self-assembled peptide nanotubes. Nat. Nanotechnol. 2006, 1:195-200.
19. Niu L., et al. Using the bending beam model to estimate the elasticity of diphenylalanine nanotubes. Langmuir 2007, 23:7443-7446.
20. Yemini M., et al. Peptide nanotube-modified electrodes for enzyme-biosensor applications. Anal. Chem. 2005, 77:5155-5159.
21. Yemini M., et al. Novel electrochemical biosensing platform using self-assembled peptide nanotubes. Nano Lett. 2004, 5:183-186.
22. Adler-Abramovich L., et al. Characterization of peptide-nanostructure-modified electrodes and their application for ultrasensitive environmental monitoring. Small 2010, 6:825-831.
23. Hill R.J.A., et al. Alignment of aromatic peptide tubes in strong magnetic fields. Adv. Mater. 2007, 19:4474-4479.
24. Adler-Abramovich L., Gazit E. Controlled patterning of peptide nanotubes and nanospheres using inkjet printing technology. J. Pept. Sci. 2008, 14:217-223.
25. Sedman V.L., et al. Thermomechanical manipulation of aromatic peptide nanotubes. Langmuir 2009, 25:7256-7259.
26. Castillo J., et al. Manipulation of self-assembly amyloid peptide nanotubes by dielectrophoresis. Electrophoresis 2008, 29:5026-5032.
27. Adler-Abramovich L., et al. Patterned arrays of ordered peptide nanostructures. J. Nanosci. Nanotechnol. 2009, 9:1701-1708.
28. Larsen M., et al. Self-assembled peptide nanotubes as an etching material for the rapid fabrication of silicon wires. Bionanoscience 2011, 1:31-37.
29. Shklovsky J., et al. Bioinspired peptide nanotubes: deposition technology and physical properties. Mater. Sci. Eng. B 2010, 169:62-66.
30. Sasso L., et al. Self-assembled diphenylalanine nanowires for cellular studies and sensor applications. J. Nanosci. Nanotechnol. 2011, 10.1166/jnn.2011.4534.
31. Ryu J., et al. Synthesis of diphenylalanine/cobalt oxide hybrid nanowires and their application to energy storage. ACS Nano 2009, 4:159-164.
32. Ryu J., et al. Mineralization of self-assembled peptide nanofibers for rechargeable lithium ion batteries. Adv. Mater. 2010, 22:5537-5541.
33. Ryoo H.-I., et al. A microfluidic system incorporated with peptide/Pd nanowires for heterogeneous catalytic reactions. Lab Chip 2011, 11:378-380.
34. Kholkin A., et al. Strong piezoelectricity in bioinspired peptide nanotubes. ACS Nano 2010, 4:610-614.
35. Lee J.S., et al. Self-assembly of semiconducting photoluminescent peptide nanowires in the vapor phase. Angew. Chem. Int. Ed. 2011, 50:1164-1167.
36. Kim J.H., et al. Selective detection of neurotoxin by photoluminescent peptide nanotubes. Small 2011, 7:718-722.
37. Kim J.H., et al. Self-assembled, photoluminescent peptide hydrogel as a versatile platform for enzyme-based optical biosensors. Biosens. Bioelectron. 2011, 26:1860-1865.
38. Tamamis P., et al. Self-assembly of phenylalanine oligopeptides: insights from experiments and simulations. Biophys. J. 2009, 96:5020-5029.
39. Goerbitz C.H. The structure of nanotubes formed by diphenylalanine, the core recognition motif of Alzheimer's beta-amyloid polypeptide. Chem. Commun. 2006, 2332-2334.
40. Amdursky N., et al. Elementary building blocks of self-assembled peptide nanotubes. J. Am. Chem. Soc. 2010, 132:15632-15636.
41. Adler-Abramovich L., et al. Thermal and chemical stability of diphenylalanine peptide nanotubes: implications for nanotechnological applications. Langmuir 2006, 22:1313-1320.
42. Ryu J., Park C.B. High stability of self-assembled peptide nanowires against thermal, chemical, and proteolytic attacks. Biotechnol. Bioeng. 2010, 105:221-230.
43. Andersen K.B., et al. Stability of diphenylalanine peptide nanotubes in solution. Nanoscale 2011, 3:994-998.
44. Kasotakis E., et al. Design of metal-binding sites onto self-assembled peptide fibrils. Biopolymers 2009, 92:164-172.
45. Dinca V., et al. Directed three-dimensional patterning of self-assembled peptide fibrils. Nano Lett. 2008, 8:538-543.
46. Viguier B., et al. Development of an electrochemical metal-ion biosensor using self-assembled peptide nanofibrils. ACS Appl. Mater. Interfaces 2011, 3:1594-1600.
47. Zhang S., et al. Spontaneous assembly of a self-complementary oligopeptide to form a stable macroscopic membrane. Proc. Natl. Acad. Sci. U.S.A. 1993, 90:3334-3338.
48. Yang H., et al. Modification of hydrophilic and hydrophobic surfaces using an ionic-complementary peptide. PLoS ONE 2007, 2:e1325.
49. Qian Z., et al. Improved enzyme immobilization on an ionic-complementary peptide-modified electrode for biomolecular sensing. Langmuir 2009, 26:2176-2180.
50. Yang H., et al. Ionic-complementary peptide-modified highly ordered pyrolytic graphite electrode for biosensor application. Biotechnol. Prog. 2008, 24:964-971.
51. de la Rica R., et al. Bioinspired target-specific crystallization on peptide nanotubes for ultrasensitive Pb ion detection. Small 2010, 6:1753-1756.
52. de la Rica R., et al. Peptide-nanotube biochips for label-free detection of multiple pathogens. Small 2010, 6:1092-1095.
53. de la Rica R., et al. Label-free pathogen detection with sensor chips assembled from peptide nanotubes. Angew. Chem. Int. Ed. 2008, 47:9752-9755.
54. Chen C.-L., et al. A new peptide-based method for the design and synthesis of nanoparticle superstructures: construction of highly ordered gold nanoparticle double helices. J. Am. Chem. Soc. 2008, 130:13555-13557.
55. Naik R.R., et al. Biomimetic synthesis and patterning of silver nanoparticles. Nat. Mater. 2002, 1:169-172.
56. Song C., et al. Expeditious synthesis and assembly of sub-100nm hollow spherical gold nanoparticle superstructures. J. Am. Chem. Soc. 2010, 132:14033-14035.
57. Hwang L., et al. Preparation of 1-D nanoparticle superstructures with tailorable thicknesses using gold-binding peptide conjugates. Chem. Commun. 2011, 47:185-187.
58. Chen C.-L., Rosi N.L. Preparation of unique 1-D nanoparticle superstructures and tailoring their structural features. J. Am. Chem. Soc. 2010, 132:6902-6903.
59. Kim J., et al. Simultaneous synthesis of temperature-tunable peptide and gold nanoparticle hybrid spheres. Biomacromolecules 2011, 12:2518-2523.
60. Barrau S., et al. Integration of amyloid nanowires in organic solar cells. Appl. Phys. Lett. 2008, 93:023307.
61. Channon K.J., et al. Modification of fluorophore photophysics through peptide-driven self-assembly. J. Am. Chem. Soc. 2008, 130:5487-5491.
62. Channon K.J., et al. Efficient energy transfer within self-assembling peptide fibers: a route to light-harvesting nanomaterials. J. Am. Chem. Soc. 2009, 131:12520-12521.
63. Liang Y., et al. Light harvesting antenna on an amyloid scaffold. Chem. Commun. 2008, 6522-6524.
64. Hung A.M., Stupp S.I. Simultaneous self-assembly, orientation, and patterning of peptide-amphiphile nanofibers by soft lithography. Nano Lett. 2007, 7:1165-1171.
65. Hung A.M., Stupp S.I. Understanding factors affecting alignment of self-assembling nanofibers patterned by sonication-assisted solution embossing. Langmuir 2009, 25:7084-7089.
66. Sone E.D., Stupp S.I. Bioinspired magnetite mineralization of peptide-amphiphile nanofibers. Chem. Mater. 2011, 23:2005-2007.
67. Lamm M.S., et al. Laterally spaced linear nanoparticle arrays templated by laminated beta-sheet fibrils. Adv. Mater. 2008, 20:447-451.
68. Sharma N., et al. One-dimensional gold nanoparticle arrays by electrostatically directed organization using polypeptide self-assembly. Angew. Chem. Int. Ed. 2009, 48:7078-7082.
69. Nonoyama T., et al. Ordered nanopattern arrangement of gold nanoparticles on β-sheet peptide templates through nucleobase pairing. ACS Nano 2011, 5:6174-6183.
70. Tsyboulski D.A., et al. Self-assembling peptide coatings designed for highly luminescent suspension of single-walled carbon nanotubes. J. Am. Chem. Soc. 2008, 130:17134-17140.
71. Yeh J.I., et al. Peptergents: peptide detergents that improve stability and functionality of a membrane protein, glycerol-3-phosphate dehydrogenase. Biochemistry 2005, 44:16912-16919.
72. Matsumoto K., et al. Designer peptide surfactants stabilize functional photosystem-I membrane complex in aqueous solution for extended time. J. Phys. Chem. B 2009, 113:75-83.
73. Kiley P., et al. Self-assembling peptide detergents stabilize isolated photosystem I on a dry surface for an extended time. PLoS Biol. 2005, 3:e230.
74. Zhao X., et al. Designer short peptide surfactants stabilize G protein-coupled receptor bovine rhodopsin. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:17707-17712.
75. Wang X., et al. Peptide surfactants for cell-free production of functional G protein-coupled receptors. Proc. Natl. Acad. Sci. U.S.A. 2011, 108:9049-9054.
76. Hauser C.A.E., et al. Natural tri- to hexapeptides self-assemble in water to amyloid beta-type fiber aggregates by unexpected alpha-helical intermediate structures. Proc. Natl. Acad. Sci. U.S.A. 2011, 108:1361-1366.
77. Mishra A., et al. Ultrasmall natural peptides self-assemble to strong temperature-resistant helical fibers in scaffolds suitable for tissue engineering. Nano Today 2011, 6:232-239.
78. Lakshmanan A., Hauser C.A.E. Ultrasmall peptides self-assemble into diverse nanostructures: morphological evaluation and potential implications. Int. J. Mol. Sci. 2011, 12:5736-5746.
79. Kyle S., et al. Production of self-assembling biomaterials for tissue engineering. Trends Biotechnol. 2009, 27:423-433.
80. Branco M.C., Schneider J.P. Self-assembling materials for therapeutic delivery. Acta Biomater. 2009, 5:817-831.
81. Kyle S., et al. Recombinant self-assembling peptides as biomaterials for tissue engineering. Biomaterials 2010, 31:9395-9405.
82. Knowles T.P.J., Buehler M.J. Nanomechanics of functional and pathological amyloid materials. Nat. Nanotechnol. 2011, 6:469-479.
83. Woolfson D.N., Mahmoud Z.N. More than just bare scaffolds: towards multi-component and decorated fibrous biomaterials. Chem. Soc. Rev. 2010, 39:3464-3479.
84. Estrada L.D., Soto C. Disrupting beta-amyloid aggregation for Alzheimer disease treatment. Curr. Top. Med. Chem. 2007, 7:115-126.
85. Castillo-Leon J., et al. Micro-" factory" for self-assembled peptide nanostructures. Microelectron. Eng. 2011, 88:1685-1688.