-
1
-
-
58549083738
-
Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil
-
Allen HK, Moe LA, Rodbumrer J, Gaarder A, Handelsman J. 2009. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil. ISME J. 3:243-251.
-
(2009)
ISME J
, vol.3
, pp. 243-251
-
-
Allen, H.K.1
Moe, L.A.2
Rodbumrer, J.3
Gaarder, A.4
Handelsman, J.5
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389- 3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
-
3
-
-
42449159361
-
Rifamycin antibiotic resistance by ADPribosylation: structure and diversity of Arr
-
U. S. A
-
Baysarowich J, et al. 2008. Rifamycin antibiotic resistance by ADPribosylation: structure and diversity of Arr. Proc. Natl. Acad. Sci. U. S. A. 105:4886-4891.
-
(2008)
Proc. Natl. Acad. Sci
, vol.105
, pp. 4886-4891
-
-
Baysarowich, J.1
-
4
-
-
35748929920
-
Expanding the soil antibiotic resistome: exploring environmental diversity
-
D'Costa VM, Griffiths E, Wright GD. 2007. Expanding the soil antibiotic resistome: exploring environmental diversity. Curr. Opin. Microbiol. 10: 481-489.
-
(2007)
Curr. Opin. Microbiol.
, vol.10
, pp. 481-489
-
-
D'Costa, V.M.1
Griffiths, E.2
Wright, G.D.3
-
5
-
-
80053130409
-
Antibiotic resistance is ancient
-
D'Costa VM, et al. 2011. Antibiotic resistance is ancient. Nature 477:457- 461.
-
(2011)
Nature
, vol.477
, pp. 457-461
-
-
D'Costa, V.M.1
-
7
-
-
77954268851
-
Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins
-
Donato JJ, et al. 2010. Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins. Appl. Environ. Microbiol. 76:4396-4401.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4396-4401
-
-
Donato, J.J.1
-
8
-
-
42049120716
-
Antibiotics as signals that trigger specific bacterial responses
-
Fajardo A, Martìnez JL. 2008. Antibiotics as signals that trigger specific bacterial responses. Curr. Opin. Microbiol. 11:161-167.
-
(2008)
Curr. Opin. Microbiol.
, vol.11
, pp. 161-167
-
-
Fajardo, A.1
Martìnez, J.L.2
-
9
-
-
64749095033
-
Bacterial multidrug transport through the lens of the major facilitator superfamily
-
Fluman N, Bibi E. 2009. Bacterial multidrug transport through the lens of the major facilitator superfamily. Biochim. Biophys. Acta 1794:738 -747.
-
(2009)
Biochim. Biophys. Acta
, vol.1794
, pp. 738-747
-
-
Fluman, N.1
Bibi, E.2
-
10
-
-
79251587455
-
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen
-
Hess M, et al. 2011. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 331:463- 467.
-
(2011)
Science
, vol.331
, pp. 463-467
-
-
Hess, M.1
-
11
-
-
35448962054
-
Microbial recognition of antibiotics: ecological, physiological, and therapeutic implications
-
Hoffman L, D'Argenio D, Bader M, Miller S. 2007. Microbial recognition of antibiotics: ecological, physiological, and therapeutic implications. Microbe 2:175-182.
-
(2007)
Microbe
, vol.2
, pp. 175-182
-
-
Hoffman, L.1
D'Argenio, D.2
Bader, M.3
Miller, S.4
-
12
-
-
21044452600
-
Searching sequence space: two different approaches to dihydrofolate reductase catalysis
-
Howell EE. 2005. Searching sequence space: two different approaches to dihydrofolate reductase catalysis. ChemBioChem 6:590-600.
-
(2005)
ChemBioChem
, vol.6
, pp. 590-600
-
-
Howell, E.E.1
-
14
-
-
33644547013
-
Molecular understanding of aminoglycoside action and resistance
-
Jana S, Deb JK. 2006. Molecular understanding of aminoglycoside action and resistance. Appl. Microbiol. Biotechnol. 70:140 -150.
-
(2006)
Appl. Microbiol. Biotechnol.
, vol.70
, pp. 140-150
-
-
Jana, S.1
Deb, J.K.2
-
15
-
-
0035221247
-
Exploring the unknown The silent revolution of microbiology
-
Kellenberger E. 2001. Exploring the unknown. The silent revolution of microbiology. EMBO Rep. 2:5-7.
-
(2001)
EMBO Rep
, vol.2
, pp. 5-7
-
-
Kellenberger, E.1
-
16
-
-
77955562279
-
Novel florfenicol and chloramphenicol resistance gene discovered in Alaskan soil by using functional metagenomics
-
Lang KS, et al. 2010. Novel florfenicol and chloramphenicol resistance gene discovered in Alaskan soil by using functional metagenomics. Appl. Environ. Microbiol. 76:5321-5326.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 5321-5326
-
-
Lang, K.S.1
-
17
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
23
-
Larkin MA, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948.
-
(2007)
Bioinformatics
, pp. 2947-2948
-
-
Larkin, M.A.1
-
18
-
-
0020326564
-
Microbial resistance to antibiotics: an evolving and persistent problem
-
Levy S. 1982. Microbial resistance to antibiotics: an evolving and persistent problem. Lancet 320:83- 88.
-
(1982)
Lancet
, vol.320
, pp. 83-88
-
-
Levy, S.1
-
19
-
-
10944272743
-
Antibacterial resistance worldwide: causes, challenges and responses
-
Levy SB, Marshall B. 2004. Antibacterial resistance worldwide: causes, challenges and responses. Nat. Med. 10:S122-S129.
-
(2004)
Nat. Med.
, vol.10
-
-
Levy, S.B.1
Marshall, B.2
-
20
-
-
67649610422
-
Effect of dimerization on the stability and catalytic activity of dihydrofolate reductase from the hyperthermophile Thermotoga maritima
-
Loveridge EJ, Rodriguez RJ, Swanwick RS, Allemann RK. 2009. Effect of dimerization on the stability and catalytic activity of dihydrofolate reductase from the hyperthermophile Thermotoga maritima. Biochemistry 48: 5922-5933.
-
(2009)
Biochemistry
, vol.48
, pp. 5922-5933
-
-
Loveridge, E.J.1
Rodriguez, R.J.2
Swanwick, R.S.3
Allemann, R.K.4
-
21
-
-
47749155981
-
Antibiotics and antibiotic resistance genes in natural environments
-
Martinez JL. 2008. Antibiotics and antibiotic resistance genes in natural environments. Science 321:365-367.
-
(2008)
Science
, vol.321
, pp. 365-367
-
-
Martinez, J.L.1
-
22
-
-
67650486955
-
The role of natural environments in the evolution of resistance traits in pathogenic bacteria
-
Martinez JL. 2009. The role of natural environments in the evolution of resistance traits in pathogenic bacteria. Proc. Biol. Sci. 276:2521-2530.
-
(2009)
Proc. Biol. Sci.
, vol.276
, pp. 2521-2530
-
-
Martinez, J.L.1
-
23
-
-
33845957530
-
Accurate phylogenetic classification of variable-length DNA fragments
-
McHardy AC, Martin HG, Tsirigos A, Hugenholtz P, Rigoutsos I. 2007. Accurate phylogenetic classification of variable-length DNA fragments. Nat. Methods 4:63-72.
-
(2007)
Nat. Methods
, vol.4
, pp. 63-72
-
-
McHardy, A.C.1
Martin, H.G.2
Tsirigos, A.3
Hugenholtz, P.4
Rigoutsos, I.5
-
24
-
-
0030846351
-
Characterization of gentamicin 2=-Nacetyltransferase from Providencia stuartii: its use of peptidoglycan metabolites for acetylation of both aminoglycosides and peptidoglycan
-
Payie K, Clarke A. 1997. Characterization of gentamicin 2=-Nacetyltransferase from Providencia stuartii: its use of peptidoglycan metabolites for acetylation of both aminoglycosides and peptidoglycan. J. Bacteriol. 179:4106-4114.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4106-4114
-
-
Payie, K.1
Clarke, A.2
-
25
-
-
0029127842
-
Contribution of gentamicin 2=-Nacetyltransferase to the O acetylation of peptidoglycan in Providencia stuartii
-
Payie K, Rather P, Clarke A. 1995. Contribution of gentamicin 2=-Nacetyltransferase to the O acetylation of peptidoglycan in Providencia stuartii. J. Bacteriol. 177:4303- 4310.
-
(1995)
J. Bacteriol.
, vol.177
-
-
Payie, K.1
Rather, P.2
Clarke, A.3
-
26
-
-
24044514016
-
Efflux-mediated antimicrobial resistance
-
Poole K. 2005. Efflux-mediated antimicrobial resistance. J. Antimicrob. Chemother. 56:20 -51.
-
(2005)
J. Antimicrob. Chemother.
, vol.56
, pp. 20-51
-
-
Poole, K.1
-
27
-
-
4344587758
-
Uncultured soil bacteria are a reservoir of new antibiotic resistance genes
-
Riesenfeld CS, Goodman RM, Handelsman J. 2004. Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environ. Microbiol. 6:981-989.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 981-989
-
-
Riesenfeld, C.S.1
Goodman, R.M.2
Handelsman, J.3
-
28
-
-
71349088748
-
Achievements and new knowledge unraveled by metagenomic approaches
-
Simon C, Daniel R. 2009. Achievements and new knowledge unraveled by metagenomic approaches. Appl. Microbiol. Biotechnol. 85:265-276.
-
(2009)
Appl. Microbiol. Biotechnol.
, vol.85
, pp. 265-276
-
-
Simon, C.1
Daniel, R.2
-
29
-
-
65549145375
-
Rapid identification of genes encoding DNA polymerases by function-based screening of metagenomic libraries derived from glacial ice
-
Simon C, Herath J, Rockstroh S, Daniel R. 2009. Rapid identification of genes encoding DNA polymerases by function-based screening of metagenomic libraries derived from glacial ice. Appl. Environ. Microbiol. 75: 2964-2968.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2964-2968
-
-
Simon, C.1
Herath, J.2
Rockstroh, S.3
Daniel, R.4
-
30
-
-
69549086653
-
Functional characterization of the antibiotic resistance reservoir in the human microflora
-
Sommer MOA, Dantas G, Church GM. 2009. Functional characterization of the antibiotic resistance reservoir in the human microflora. Science 325:1128 -1131.
-
(2009)
Science
, vol.325
, pp. 1128-1131
-
-
Sommer, M.O.A.1
Dantas, G.2
Church, G.M.3
-
31
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, et al. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
-
33
-
-
79953293014
-
Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples
-
Torres-Cortés G, et al. 2011. Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples. Environ. Microbiol. 4:1101-1114.
-
(2011)
Environ. Microbiol.
, vol.4
, pp. 1101-1114
-
-
Torres-Cortés, G.1
-
34
-
-
65449188232
-
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse AM, Procter JB, Martin DMA, Clamp MI, Barton GJ. 2009. Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189 -1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.I.4
Barton, G.J.5
-
35
-
-
33847151750
-
The antibiotic resistome: the nexus of chemical and genetic diversity
-
Wright GD. 2007. The antibiotic resistome: the nexus of chemical and genetic diversity. Nat. Rev. Microbiol. 5:175-186.
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 175-186
-
-
Wright, G.D.1
-
36
-
-
22144476125
-
Bacterial resistance to antibiotics: enzymatic degradation and modification
-
Wright GD. 2005. Bacterial resistance to antibiotics: enzymatic degradation and modification. Adv. Drug Deliv. Rev. 57:1451-1470.
-
(2005)
Adv. Drug Deliv. Rev.
, vol.57
, pp. 1451-1470
-
-
Wright, G.D.1
|