메뉴 건너뛰기




Volumn , Issue 60, 2012, Pages

Single-cell analysis of Bacillus subtilis biofilms using fluorescence microscopy and flow cytometry

Author keywords

Bacillus subtilis; Biofilm formation; Cell differentiation; Gene expression; Immunology; Issue 60; Single cell analysis

Indexed keywords


EID: 84857869230     PISSN: 1940087X     EISSN: None     Source Type: Journal    
DOI: 10.3791/3796     Document Type: Article
Times cited : (29)

References (34)
  • 1
    • 0028849453 scopus 로고
    • Overview of microbial biofilms
    • Costerton, J.W. Overview of microbial biofilms. J. Ind. Microbiol. 15, 137-140 (1995).
    • (1995) J. Ind. Microbiol , vol.15 , pp. 137-140
    • Costerton, J.W.1
  • 2
    • 0034443286 scopus 로고    scopus 로고
    • Microbial biofilms: From ecology to molecular genetics
    • Davey, M.E. & O'Toole, G.A. Microbial biofilms: from ecology to molecular genetics. Microbiol. Mol. Biol. Rev. 64, 847-867 (2000).
    • (2000) Microbiol. Mol. Biol. Rev , vol.64 , pp. 847-867
    • Davey, M.E.1    O'Toole, G.A.2
  • 3
    • 0033757759 scopus 로고    scopus 로고
    • Oral microbial communities: Biofilms, interactions, and genetic systems
    • Kolenbrander, P.E. Oral microbial communities: biofilms, interactions, and genetic systems. Annu. Rev. Microbiol. 54, 413-437 (2000).
    • (2000) Annu. Rev. Microbiol , vol.54 , pp. 413-437
    • Kolenbrander, P.E.1
  • 5
    • 0036711963 scopus 로고    scopus 로고
    • Biofilms: Microbial life on surfaces
    • Donlan, R.M. Biofilms: microbial life on surfaces. Emerg. Infect. Dis. 8, 881-890 (2002).
    • (2002) Emerg. Infect. Dis , vol.8 , pp. 881-890
    • Donlan, R.M.1
  • 8
    • 33645085864 scopus 로고    scopus 로고
    • A major protein component of the Bacillus subtilis biofilm matrix
    • Branda, S.S., Chu, F., Kearns, D.B., Losick, R., & Kolter, R. A major protein component of the Bacillus subtilis biofilm matrix. Mol. Microbiol. 59, 1229-1238 (2006).
    • (2006) Mol. Microbiol , vol.59 , pp. 1229-1238
    • Branda, S.S.1    Chu, F.2    Kearns, D.B.3    Losick, R.4    Kolter, R.5
  • 10
    • 34247107221 scopus 로고    scopus 로고
    • ica and beyond: Biofilm mechanisms and regulation in Staphylococcus epidermidis and Staphylococcus aureus
    • O'Gara, J. P. ica and beyond: biofilm mechanisms and regulation in Staphylococcus epidermidis and Staphylococcus aureus. FEMS Microbiol Lett. 270, 179-188 (2007).
    • (2007) FEMS Microbiol Lett , vol.270 , pp. 179-188
    • O'Gara, J.P.1
  • 11
    • 37349100857 scopus 로고    scopus 로고
    • Bistability and biofilm formation in Bacillus subtilis
    • Chai, Y., Chu, F., Kolter, R., & Losick, R. Bistability and biofilm formation in Bacillus subtilis. Mol. Microbiol. 67, 254-263 (2008).
    • (2008) Mol. Microbiol , vol.67 , pp. 254-263
    • Chai, Y.1    Chu, F.2    Kolter, R.3    Losick, R.4
  • 12
    • 69949095254 scopus 로고    scopus 로고
    • Role of the sigmaD-dependent autolysins in Bacillus subtilis population heterogeneity
    • Chen, R., Guttenplan, S.B., Blair, K.M. & Kearns, D.B. Role of the sigmaD-dependent autolysins in Bacillus subtilis population heterogeneity. J. Bacteriol. 191, 5775-5784 (2009).
    • (2009) J. Bacteriol , vol.191 , pp. 5775-5784
    • Chen, R.1    Guttenplan, S.B.2    Blair, K.M.3    Kearns, D.B.4
  • 13
    • 78650692806 scopus 로고    scopus 로고
    • The EpsE flagellar clutch is bifunctional and synergizes with EPS biosynthesis to promote Bacillus subtilis biofilm formation
    • Guttenplan, S.B., Blair, K.M., & Kearns, D.B. The EpsE flagellar clutch is bifunctional and synergizes with EPS biosynthesis to promote Bacillus subtilis biofilm formation. PLoS Genet. 6, e1001243 (2010).
    • (2010) PLoS Genet , vol.6 , pp. 1001243
    • Guttenplan, S.B.1    Blair, K.M.2    Kearns, D.B.3
  • 14
    • 29144501313 scopus 로고    scopus 로고
    • Cell population heterogeneity during growth of Bacillus subtilis
    • Kearns, D.B. & Losick, R. Cell population heterogeneity during growth of Bacillus subtilis. Genes Dev. 19, 3083-3094 (2005).
    • (2005) Genes Dev , vol.19 , pp. 3083-3094
    • Kearns, D.B.1    Losick, R.2
  • 15
  • 16
    • 8744302067 scopus 로고    scopus 로고
    • Visualization of differential gene expression by improved cyan fluorescent protein and yellow fluorescent protein production in Bacillus subtilis
    • Veening, J.W., Smits, W.K., Hamoen, L.W., Jongbloed, J.D., & Kuipers, O.P. Visualization of differential gene expression by improved cyan fluorescent protein and yellow fluorescent protein production in Bacillus subtilis. Appl. Environ. Microbiol. 70, 6809-6815 (2004).
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 6809-6815
    • Veening, J.W.1    Smits, W.K.2    Hamoen, L.W.3    Jongbloed, J.D.4    Kuipers, O.P.5
  • 17
    • 33747129971 scopus 로고    scopus 로고
    • Single cell analysis of gene expression patterns of competence development and initiation of sporulation in Bacillus subtilis grown on chemically defined media
    • Veening, J.W., Smits, W.K., Hamoen, L.W., & Kuipers, O.P. Single cell analysis of gene expression patterns of competence development and initiation of sporulation in Bacillus subtilis grown on chemically defined media. J. Appl. Microbiol. 101, 531-541 (2006).
    • (2006) J. Appl. Microbiol , vol.101 , pp. 531-541
    • Veening, J.W.1    Smits, W.K.2    Hamoen, L.W.3    Kuipers, O.P.4
  • 18
    • 33646011232 scopus 로고    scopus 로고
    • Effects of phosphorelay perturbations on architecture, sporulation, and spore resistance in biofilms of Bacillus subtilis
    • Veening, J.W., Kuipers, O.P., Brul, S., Hellingwerf, K.J., & Kort, R. Effects of phosphorelay perturbations on architecture, sporulation, and spore resistance in biofilms of Bacillus subtilis. J. Bacteriol. 188, 3099-3109 (2006).
    • (2006) J. Bacteriol , vol.188 , pp. 3099-3109
    • Veening, J.W.1    Kuipers, O.P.2    Brul, S.3    Hellingwerf, K.J.4    Kort, R.5
  • 19
    • 41649102927 scopus 로고    scopus 로고
    • Control of cell fate by the formation of an architecturally complex bacterial community
    • Vlamakis, H., Aguilar, C., Losick, R., & Kolter, R. Control of cell fate by the formation of an architecturally complex bacterial community. Genes Dev. 22, 945-953 (2008).
    • (2008) Genes Dev , vol.22 , pp. 945-953
    • Vlamakis, H.1    Aguilar, C.2    Losick, R.3    Kolter, R.4
  • 20
    • 39149100341 scopus 로고    scopus 로고
    • Physiological heterogeneity in biofilms
    • Stewart, P.S. & Franklin, M.J. Physiological heterogeneity in biofilms. Nat. Rev. Microbiol. 6, 199-210 (2008).
    • (2008) Nat. Rev. Microbiol , vol.6 , pp. 199-210
    • Stewart, P.S.1    Franklin, M.J.2
  • 21
    • 53849146767 scopus 로고    scopus 로고
    • Bistability, epigenetics, and bet-hedging in bacteria
    • Veening, J.W., Smits, W.K., & Kuipers, O.P. Bistability, epigenetics, and bet-hedging in bacteria. Annu. Rev. Microbiol. 62, 193-210 (2008).
    • (2008) Annu. Rev. Microbiol , vol.62 , pp. 193-210
    • Veening, J.W.1    Smits, W.K.2    Kuipers, O.P.3
  • 22
    • 77956160359 scopus 로고    scopus 로고
    • KinD is a checkpoint protein linking spore formation to extracellular-matrix production in Bacillus subtilis biofilms
    • doi:10.1128/mBio.00035-10
    • Aguilar, C., Vlamakis, H., Guzman, A., Losick, R., & Kolter, R. KinD is a checkpoint protein linking spore formation to extracellular-matrix production in Bacillus subtilis biofilms. MBio. 1, doi:10.1128/mBio.00035-10 (2010).
    • (2010) MBio , vol.1
    • Aguilar, C.1    Vlamakis, H.2    Guzman, A.3    Losick, R.4    Kolter, R.5
  • 23
    • 58549115547 scopus 로고    scopus 로고
    • Structurally diverse natural products that cause potassium leakage trigger multicellularity in Bacillus subtilis
    • Lopez, D., Fischbach, M.A., Chu, F., Losick, R., & Kolter, R. Structurally diverse natural products that cause potassium leakage trigger multicellularity in Bacillus subtilis. Proc. Natl. Acad. Sci. U.S.A. 106, 280-285 (2009).
    • (2009) Proc. Natl. Acad. Sci. U.S.A , vol.106 , pp. 280-285
    • Lopez, D.1    Fischbach, M.A.2    Chu, F.3    Losick, R.4    Kolter, R.5
  • 24
    • 70350414428 scopus 로고    scopus 로고
    • Cannibalism enhances biofilm development in Bacillus subtilis
    • Lopez, D., Vlamakis, H., Losick, R., & Kolter, R. Cannibalism enhances biofilm development in Bacillus subtilis. Mol. Microbiol. 74, 609-618 (2009).
    • (2009) Mol. Microbiol , vol.74 , pp. 609-618
    • Lopez, D.1    Vlamakis, H.2    Losick, R.3    Kolter, R.4
  • 25
    • 0014409012 scopus 로고
    • Surfactin, a crystalline peptidelipid surfactant produced by Bacillus subtilis: Isolation, characterization and its inhibition of fibrin clot formation
    • Arima, K., Kakinuma, A., & Tamura, G. Surfactin, a crystalline peptidelipid surfactant produced by Bacillus subtilis: isolation, characterization and its inhibition of fibrin clot formation. Biochem. Biophys. Res. Commun. 31, 488-494 (1968).
    • (1968) Biochem. Biophys. Res. Commun , vol.31 , pp. 488-494
    • Arima, K.1    Kakinuma, A.2    Tamura, G.3
  • 26
    • 79957460465 scopus 로고    scopus 로고
    • An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms
    • Romero, D., Vlamakis, H., Losick, R., & Kolter, R. An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms. Mol. Microbiol. 80, 1155-1168, (2011).
    • (2011) Mol. Microbiol , vol.80 , pp. 1155-1168
    • Romero, D.1    Vlamakis, H.2    Losick, R.3    Kolter, R.4
  • 28
    • 0025837196 scopus 로고
    • Genetic systems in staphylococci
    • Novick, R.P. Genetic systems in staphylococci. Methods Enzymol. 204, 587-636 (1991).
    • (1991) Methods Enzymol , vol.204 , pp. 587-636
    • Novick, R.P.1
  • 29
    • 0016352815 scopus 로고
    • Transduction in Bacillus subtilis by bacteriophage SPP1
    • Yasbin, R.E. & Young, F.E. Transduction in Bacillus subtilis by bacteriophage SPP1. J. Virol. 14, 1343-1348 (1974).
    • (1974) J. Virol , vol.14 , pp. 1343-1348
    • Yasbin, R.E.1    Young, F.E.2
  • 31
    • 0025973117 scopus 로고
    • srfA is an operon required for surfactin production, competence development, and efficient sporulation in Bacillus subtilis
    • Nakano, M.M., et al. srfA is an operon required for surfactin production, competence development, and efficient sporulation in Bacillus subtilis. J. Bacteriol. 173, 1770-1778 (1991).
    • (1991) J. Bacteriol , vol.173 , pp. 1770-1778
    • Nakano, M.M.1
  • 32
  • 33
    • 36549040624 scopus 로고    scopus 로고
    • Thinking about Bacillus subtilis as a multicellular organism
    • Aguilar, C., Vlamakis, H., Losick, R., & Kolter, R. Thinking about Bacillus subtilis as a multicellular organism. Curr. Opin. Microbiol. 10, 638-643 (2007).
    • (2007) Curr. Opin. Microbiol , vol.10 , pp. 638-643
    • Aguilar, C.1    Vlamakis, H.2    Losick, R.3    Kolter, R.4
  • 34
    • 0031725610 scopus 로고    scopus 로고
    • Thinking about bacterial populations as multicellular organisms
    • Shapiro, J.A. Thinking about bacterial populations as multicellular organisms. Annu. Rev. Microbiol. 52, 81-104 (1998).
    • (1998) Annu. Rev. Microbiol , vol.52 , pp. 81-104
    • Shapiro, J.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.